BLASTX nr result

ID: Zingiber24_contig00044814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044814
         (334 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ01228.1| hypothetical protein PRUPE_ppa024287mg [Prunus pe...    57   3e-06
gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]             50   6e-06
ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...    50   8e-06

>gb|EMJ01228.1| hypothetical protein PRUPE_ppa024287mg [Prunus persica]
          Length = 331

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/93 (37%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
 Frame = -2

Query: 333 VAAKMEETHVXXXXXXXXXXXPFVFHPRTIRRMEXXXXXXXXXXXXAVTPFDFLHHFAAS 154
           +AAKMEE +V            FVF PRT++RME            ++TPFDFLHHF A+
Sbjct: 123 LAAKMEEPNVPFILDLQIFEPKFVFEPRTVQRMELRVMTILNWRLRSITPFDFLHHFIAN 182

Query: 153 PALLPRSATALISRASRHVVFCP--ACGFLGIS 61
              LP S+++ +  AS  ++        FLG S
Sbjct: 183 ---LPSSSSSSLFSASSDLILSTTRVIDFLGFS 212


>gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]
          Length = 347

 Score = 50.4 bits (119), Expect(2) = 6e-06
 Identities = 29/70 (41%), Positives = 37/70 (52%)
 Frame = -2

Query: 333 VAAKMEETHVXXXXXXXXXXXPFVFHPRTIRRMEXXXXXXXXXXXXAVTPFDFLHHFAAS 154
           +AAKMEE  V            +VF P+T++RME            AVTPFDFLHHF + 
Sbjct: 130 LAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISD 189

Query: 153 PALLPRSATA 124
              LP S++A
Sbjct: 190 ---LPTSSSA 196



 Score = 25.0 bits (53), Expect(2) = 6e-06
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 98  LSFAQLVDFLEYPPS 54
           LS  +++DFLE+PPS
Sbjct: 219 LSTTRVIDFLEFPPS 233


>ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
           gi|449521665|ref|XP_004167850.1| PREDICTED:
           cyclin-D1-1-like [Cucumis sativus]
          Length = 330

 Score = 50.4 bits (119), Expect(2) = 8e-06
 Identities = 29/70 (41%), Positives = 37/70 (52%)
 Frame = -2

Query: 333 VAAKMEETHVXXXXXXXXXXXPFVFHPRTIRRMEXXXXXXXXXXXXAVTPFDFLHHFAAS 154
           +AAKMEE  V            +VF P+T++RME            AVTPFDFLHHF + 
Sbjct: 122 LAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELWVMSILNWRLRAVTPFDFLHHFISD 181

Query: 153 PALLPRSATA 124
              LP S++A
Sbjct: 182 ---LPSSSSA 188



 Score = 24.6 bits (52), Expect(2) = 8e-06
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -3

Query: 98  LSFAQLVDFLEYPPS 54
           LS  +++DFLE+PPS
Sbjct: 211 LSTIRVIDFLEFPPS 225


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