BLASTX nr result

ID: Zingiber24_contig00044782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044782
         (294 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002436975.1| hypothetical protein SORBIDRAFT_10g013010 [S...    57   2e-06
ref|NP_001130404.1| uncharacterized protein LOC100191500 [Zea ma...    57   3e-06
ref|XP_004966964.1| PREDICTED: uncharacterized protein LOC101757...    56   4e-06
ref|XP_003560772.1| PREDICTED: uncharacterized protein LOC100838...    56   6e-06

>ref|XP_002436975.1| hypothetical protein SORBIDRAFT_10g013010 [Sorghum bicolor]
           gi|241915198|gb|EER88342.1| hypothetical protein
           SORBIDRAFT_10g013010 [Sorghum bicolor]
          Length = 522

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 42/111 (37%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
 Frame = +1

Query: 1   VLTLVMAMWQLHPYESLLSSR--SVACPLPXXXXXXXRLHKSAISLPLDPSSNSTAFAGP 174
           +LTLVMA+WQLHPY+ LLS+   S  CPL            +A   P  PS NS+A A  
Sbjct: 32  LLTLVMALWQLHPYQPLLSASRPSTTCPLLPRPPISASSRAAATVAPF-PSGNSSANAAS 90

Query: 175 PPKSN-----------XXXXXXXXXXXXXXXXIFQAYGSAAALFVLMGAYR 294
              ++                            F++YGSAAALFV MGAYR
Sbjct: 91  TKAASSAVPAVTTTKPAASVVPAARPRDPNKREFRSYGSAAALFVQMGAYR 141


>ref|NP_001130404.1| uncharacterized protein LOC100191500 [Zea mays]
           gi|194689036|gb|ACF78602.1| unknown [Zea mays]
           gi|194700262|gb|ACF84215.1| unknown [Zea mays]
           gi|194702894|gb|ACF85531.1| unknown [Zea mays]
           gi|223945121|gb|ACN26644.1| unknown [Zea mays]
           gi|224031215|gb|ACN34683.1| unknown [Zea mays]
           gi|413954752|gb|AFW87401.1| hypothetical protein
           ZEAMMB73_107903 [Zea mays]
          Length = 501

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 42/102 (41%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
 Frame = +1

Query: 1   VLTLVMAMWQLHPYESLLSSR-SVACPLPXXXXXXXR---LHKSAISLPLDPSSNSTAFA 168
           VLTL+ A WQL PY+SLL+S  S ACP P       R   +H    S     ++NST  +
Sbjct: 32  VLTLLAAAWQLRPYQSLLASPFSAACPQPTAGVSLPRALAVHAKKAS----SATNSTVSS 87

Query: 169 GPPPKSNXXXXXXXXXXXXXXXXIFQAYGSAAALFVLMGAYR 294
            P P                    F A GSAAALFV MGAYR
Sbjct: 88  SPSPPPGPERRE------------FHAVGSAAALFVQMGAYR 117


>ref|XP_004966964.1| PREDICTED: uncharacterized protein LOC101757183 [Setaria italica]
          Length = 490

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 44/110 (40%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
 Frame = +1

Query: 1   VLTLVMAMWQLHPYESLLS-SRSVACPL-PXXXXXXXRLHKSAISLPLDPSSN------- 153
           +LTLVMA+WQLHPY+ LLS SRS +CPL P           +A +LP   S+        
Sbjct: 34  LLTLVMALWQLHPYQPLLSTSRSSSCPLLPSQPISASSRAATAAALPTANSTTADAADTK 93

Query: 154 ---STAFAGPPPKSNXXXXXXXXXXXXXXXXIFQAYGSAAALFVLMGAYR 294
              ST  A    K +                + + YGSAAALFV MGAYR
Sbjct: 94  TAPSTVPAATATKPDAAVLPAARPRDPNKRDL-RPYGSAAALFVQMGAYR 142


>ref|XP_003560772.1| PREDICTED: uncharacterized protein LOC100838543 [Brachypodium
           distachyon]
          Length = 502

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1   VLTLVMAMWQLHPYESLLS-SRSVACPLPXXXXXXXRLHKSAISLPLDPSSNSTAFAGPP 177
           +LTL+MA+WQLHP + LL+ +RS +CP+               S    PSSN T    PP
Sbjct: 33  LLTLIMALWQLHPCQPLLAITRSPSCPILPLSHTTNATAALPSSTTKLPSSNFTTDRAPP 92

Query: 178 PKSNXXXXXXXXXXXXXXXXIFQAYGSAAALFVLMGAYR 294
             +                   + YGSAAALFV MGAYR
Sbjct: 93  TAAAARPAPLRDPNKRE----LRPYGSAAALFVQMGAYR 127


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