BLASTX nr result

ID: Zingiber24_contig00044631 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044631
         (353 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACF21695.1| NBS-type resistance protein RGC5 [Musa acuminata ...    73   3e-11

>gb|ACF21695.1| NBS-type resistance protein RGC5 [Musa acuminata subsp. malaccensis]
          Length = 1442

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
 Frame = +1

Query: 58   LEIQKTTNNLELLRIKGCPNLLLHIIHN----LPVLELEIDDTAFMKQPLIKNSLSSVCE 225
            L++ K+   LE++   GCP LLL+        L +LEL +D TA +K   IKN+L  +  
Sbjct: 1279 LQVLKSLKRLEII---GCPRLLLNEGDEQGEVLSLLELSVDKTALLKLSFIKNTLPFIQS 1335

Query: 226  LTISSSREAVMFEGEDQESLQSLTSLHSLCFSDCKNLQSLPT 351
            L I  S + V+F+ E+QE + S T+L  L F  CKNLQSLPT
Sbjct: 1336 LRIILSPQKVLFDWEEQELVHSFTALRRLEFLSCKNLQSLPT 1377


Top