BLASTX nr result

ID: Zingiber24_contig00044563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044563
         (258 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001063867.1| Os09g0551300 [Oryza sativa Japonica Group] g...    58   1e-06
gb|EEE70175.1| hypothetical protein OsJ_30252 [Oryza sativa Japo...    58   1e-06
gb|ESW18658.1| hypothetical protein PHAVU_006G059200g [Phaseolus...    56   4e-06
dbj|BAD12915.1| putative proliferating cell nuclear protein P120...    56   6e-06
gb|EEE57719.1| hypothetical protein OsJ_08204 [Oryza sativa Japo...    56   6e-06
gb|EEC73916.1| hypothetical protein OsI_08757 [Oryza sativa Indi...    56   6e-06
ref|XP_006660947.1| PREDICTED: putative ribosomal RNA methyltran...    55   9e-06
ref|XP_002454364.1| hypothetical protein SORBIDRAFT_04g029465 [S...    55   9e-06

>ref|NP_001063867.1| Os09g0551300 [Oryza sativa Japonica Group]
           gi|50726314|dbj|BAD33889.1| putative nucleolar protein
           [Oryza sativa Japonica Group]
           gi|113632100|dbj|BAF25781.1| Os09g0551300 [Oryza sativa
           Japonica Group] gi|218202587|gb|EEC85014.1| hypothetical
           protein OsI_32305 [Oryza sativa Indica Group]
          Length = 699

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
 Frame = +3

Query: 129 PLADDFLGGSDDSEEVE--ELGSDSDESD-LEAKSRAIDEAKARAE 257
           PLADDFL GS D E  E  + G DSDESD LEAKSRAIDEAK +AE
Sbjct: 112 PLADDFLAGSSDDESAEGDDSGVDSDESDDLEAKSRAIDEAKGKAE 157


>gb|EEE70175.1| hypothetical protein OsJ_30252 [Oryza sativa Japonica Group]
          Length = 688

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/46 (71%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
 Frame = +3

Query: 129 PLADDFLGGSDDSEEVE--ELGSDSDESD-LEAKSRAIDEAKARAE 257
           PLADDFL GS D E  E  + G DSDESD LEAKSRAIDEAK +AE
Sbjct: 112 PLADDFLAGSSDDESAEGDDSGVDSDESDDLEAKSRAIDEAKGKAE 157


>gb|ESW18658.1| hypothetical protein PHAVU_006G059200g [Phaseolus vulgaris]
          Length = 622

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/48 (62%), Positives = 34/48 (70%), Gaps = 5/48 (10%)
 Frame = +3

Query: 129 PLADDFLGGSDDSE-----EVEELGSDSDESDLEAKSRAIDEAKARAE 257
           PLADDFL GSDD E       ++ GSDSD+ D+E KSRAIDE KAR E
Sbjct: 64  PLADDFLQGSDDDEGKASGSDKDSGSDSDDDDIEKKSRAIDEEKAREE 111


>dbj|BAD12915.1| putative proliferating cell nuclear protein P120 [Oryza sativa
           Japonica Group] gi|45736012|dbj|BAD13040.1| putative
           proliferating cell nuclear protein P120 [Oryza sativa
           Japonica Group]
          Length = 682

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
 Frame = +3

Query: 129 PLADDFLGGSDD-SEEVEELGSDSDESD-LEAKSRAIDEAKARAE 257
           PLADDFL GSDD S+  ++ G DSDESD LEAKSRAIDE K +AE
Sbjct: 108 PLADDFLAGSDDESDGGDDSGVDSDESDDLEAKSRAIDEEKEKAE 152


>gb|EEE57719.1| hypothetical protein OsJ_08204 [Oryza sativa Japonica Group]
          Length = 713

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
 Frame = +3

Query: 129 PLADDFLGGSDD-SEEVEELGSDSDESD-LEAKSRAIDEAKARAE 257
           PLADDFL GSDD S+  ++ G DSDESD LEAKSRAIDE K +AE
Sbjct: 108 PLADDFLAGSDDESDGGDDSGVDSDESDDLEAKSRAIDEEKEKAE 152


>gb|EEC73916.1| hypothetical protein OsI_08757 [Oryza sativa Indica Group]
          Length = 695

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 2/45 (4%)
 Frame = +3

Query: 129 PLADDFLGGSDD-SEEVEELGSDSDESD-LEAKSRAIDEAKARAE 257
           PLADDFL GSDD S+  ++ G DSDESD LEAKSRAIDE K +AE
Sbjct: 108 PLADDFLAGSDDESDGGDDSGVDSDESDDLEAKSRAIDEEKEKAE 152


>ref|XP_006660947.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
           [Oryza brachyantha]
          Length = 693

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 31/46 (67%), Positives = 34/46 (73%), Gaps = 3/46 (6%)
 Frame = +3

Query: 129 PLADDFLGGSDDSEEVE--ELGSDSDESD-LEAKSRAIDEAKARAE 257
           PLADDFL GS D E  E  + G +SDESD  EAKSRAIDEAK +AE
Sbjct: 102 PLADDFLAGSSDDESAEGHDSGVESDESDDFEAKSRAIDEAKGKAE 147


>ref|XP_002454364.1| hypothetical protein SORBIDRAFT_04g029465 [Sorghum bicolor]
           gi|241934195|gb|EES07340.1| hypothetical protein
           SORBIDRAFT_04g029465 [Sorghum bicolor]
          Length = 640

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 29/44 (65%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
 Frame = +3

Query: 129 PLADDFLGGSDDSEEVEELGSDSDES-DLEAKSRAIDEAKARAE 257
           PLADDFL GSD+  +  + G +SDES DLEAKSRAIDE K +AE
Sbjct: 52  PLADDFLAGSDEGSDGGDSGLESDESDDLEAKSRAIDEQKLKAE 95


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