BLASTX nr result
ID: Zingiber24_contig00044388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00044388
(653 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002453863.1| hypothetical protein SORBIDRAFT_04g019800 [S... 79 2e-12
gb|EOY27137.1| Root hair defective 3 GTP-binding protein (RHD3) ... 77 3e-12
gb|EOY27136.1| Root hair defective 3 GTP-binding protein (RHD3) ... 77 3e-12
dbj|BAD45217.1| root hair defective 3 GTP-binding protein-like [... 77 4e-12
gb|EEE54847.1| hypothetical protein OsJ_02311 [Oryza sativa Japo... 77 4e-12
gb|EEC70935.1| hypothetical protein OsI_02526 [Oryza sativa Indi... 77 4e-12
ref|NP_001043388.1| Os01g0575000 [Oryza sativa Japonica Group] g... 77 4e-12
ref|XP_006644304.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik... 77 6e-12
ref|NP_974308.1| protein ROOT HAIR DEFECTIVE 3 [Arabidopsis thal... 77 6e-12
ref|NP_188003.1| protein ROOT HAIR DEFECTIVE 3 [Arabidopsis thal... 77 6e-12
dbj|BAF02124.1| root hair defective 3 [Arabidopsis thaliana] 77 6e-12
ref|XP_006342985.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik... 76 8e-12
ref|XP_006858355.1| hypothetical protein AMTR_s00064p00178110 [A... 76 1e-11
ref|XP_004235599.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik... 76 1e-11
ref|XP_004235598.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik... 76 1e-11
ref|XP_004952515.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-lik... 75 1e-11
ref|XP_006298948.1| hypothetical protein CARUB_v10015073mg [Caps... 75 1e-11
gb|EPS65304.1| hypothetical protein M569_09474, partial [Genlise... 74 3e-11
gb|EMT32595.1| hypothetical protein F775_05472 [Aegilops tauschii] 74 3e-11
gb|EMS46326.1| Protein ROOT HAIR DEFECTIVE 3 [Triticum urartu] 74 3e-11
>ref|XP_002453863.1| hypothetical protein SORBIDRAFT_04g019800 [Sorghum bicolor]
gi|241933694|gb|EES06839.1| hypothetical protein
SORBIDRAFT_04g019800 [Sorghum bicolor]
Length = 798
Score = 78.6 bits (192), Expect = 2e-12
Identities = 46/108 (42%), Positives = 59/108 (54%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
FLV KA+WVQLD+A FQNG LP IL+LST+F+PT+MN+L++LADEG R
Sbjct: 711 FLVGKAIWVQLDIASEFQNGFLPAILSLSTKFVPTIMNILKRLADEGQR----------- 759
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQSCVEYPTANE 325
D QR + Q N SS SS+T + S +E
Sbjct: 760 ------PAASDRQR---EMELQPTNRSSYSSVTSAGSSSITATENGSE 798
>gb|EOY27137.1| Root hair defective 3 GTP-binding protein (RHD3) isoform 2
[Theobroma cacao]
Length = 813
Score = 77.4 bits (189), Expect = 3e-12
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEG 142
FL+ KALWVQLD++ F+NG LPG+L+LST+FLPTVMNLLRKLA+EG
Sbjct: 715 FLIMKALWVQLDISGEFRNGALPGLLSLSTKFLPTVMNLLRKLAEEG 761
>gb|EOY27136.1| Root hair defective 3 GTP-binding protein (RHD3) isoform 1
[Theobroma cacao]
Length = 822
Score = 77.4 bits (189), Expect = 3e-12
Identities = 35/47 (74%), Positives = 43/47 (91%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEG 142
FL+ KALWVQLD++ F+NG LPG+L+LST+FLPTVMNLLRKLA+EG
Sbjct: 724 FLIMKALWVQLDISGEFRNGALPGLLSLSTKFLPTVMNLLRKLAEEG 770
>dbj|BAD45217.1| root hair defective 3 GTP-binding protein-like [Oryza sativa
Japonica Group]
Length = 524
Score = 77.0 bits (188), Expect = 4e-12
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
FLV KA+WVQLD+A+ FQNG LP +L+LST+F+PT+MN+L++LADEG R
Sbjct: 428 FLVGKAMWVQLDIAKEFQNGFLPAVLSLSTKFVPTIMNILKRLADEGQRPAAPERQREME 487
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQ 295
L +S R S +V S +SS++S ++S P+
Sbjct: 488 --LQPKSTRNGSHSNVTS-----AGSSSITS-SESGPE 517
>gb|EEE54847.1| hypothetical protein OsJ_02311 [Oryza sativa Japonica Group]
Length = 806
Score = 77.0 bits (188), Expect = 4e-12
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
FLV KA+WVQLD+A+ FQNG LP +L+LST+F+PT+MN+L++LADEG R
Sbjct: 710 FLVGKAMWVQLDIAKEFQNGFLPAVLSLSTKFVPTIMNILKRLADEGQRPAAPERQREME 769
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQ 295
L +S R S +V S +SS++S ++S P+
Sbjct: 770 --LQPKSTRNGSHSNVTS-----AGSSSITS-SESGPE 799
>gb|EEC70935.1| hypothetical protein OsI_02526 [Oryza sativa Indica Group]
Length = 806
Score = 77.0 bits (188), Expect = 4e-12
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
FLV KA+WVQLD+A+ FQNG LP +L+LST+F+PT+MN+L++LADEG R
Sbjct: 710 FLVGKAMWVQLDIAKEFQNGFLPAVLSLSTKFVPTIMNILKRLADEGQRPAAPERQREME 769
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQ 295
L +S R S +V S +SS++S ++S P+
Sbjct: 770 --LQPKSTRNGSHSNVTS-----AGSSSITS-SESGPE 799
>ref|NP_001043388.1| Os01g0575000 [Oryza sativa Japonica Group]
gi|122228672|sp|Q0JLS6.1|RHD3_ORYSJ RecName:
Full=Protein ROOT HAIR DEFECTIVE 3; AltName:
Full=Protein SEY1 homolog 1 gi|113532919|dbj|BAF05302.1|
Os01g0575000 [Oryza sativa Japonica Group]
Length = 806
Score = 77.0 bits (188), Expect = 4e-12
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
FLV KA+WVQLD+A+ FQNG LP +L+LST+F+PT+MN+L++LADEG R
Sbjct: 710 FLVGKAMWVQLDIAKEFQNGFLPAVLSLSTKFVPTIMNILKRLADEGQRPAAPERQREME 769
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQ 295
L +S R S +V S +SS++S ++S P+
Sbjct: 770 --LQPKSTRNGSHSNVTS-----AGSSSITS-SESGPE 799
>ref|XP_006644304.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Oryza brachyantha]
Length = 806
Score = 76.6 bits (187), Expect = 6e-12
Identities = 44/98 (44%), Positives = 63/98 (64%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
FLV KA+WVQLD+A+ FQNG LP +L+LST+F+PT+MN+L++LADEG R
Sbjct: 710 FLVGKAMWVQLDIAKEFQNGFLPALLSLSTKFVPTIMNILKRLADEGQRPAAPERQREME 769
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQ 295
L +S R S +V S +SS++S ++S P+
Sbjct: 770 --LQPKSTRNGSHSNVTS-----AGSSSITS-SESGPE 799
>ref|NP_974308.1| protein ROOT HAIR DEFECTIVE 3 [Arabidopsis thaliana]
gi|332641907|gb|AEE75428.1| Root hair defective 3
[Arabidopsis thaliana]
Length = 738
Score = 76.6 bits (187), Expect = 6e-12
Identities = 48/106 (45%), Positives = 64/106 (60%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
+LV KALWVQL+++ FQNG+LPG+L+LST+F+PTVMNLL+KLA+EG
Sbjct: 647 YLVSKALWVQLNISGEFQNGVLPGLLSLSTKFIPTVMNLLKKLAEEGQAPPTN------- 699
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQSCVEYPTA 319
QS+ +Q V TT ++SS SS SSP V T+
Sbjct: 700 ---SNQSMNSTAQSEV---TTNGESSSSSSS--GSSPAKNVPIDTS 737
>ref|NP_188003.1| protein ROOT HAIR DEFECTIVE 3 [Arabidopsis thaliana]
gi|75279781|sp|P93042.1|RHD3_ARATH RecName: Full=Protein
ROOT HAIR DEFECTIVE 3; AltName: Full=Protein FRAGILE
FIBER 4; AltName: Full=Protein SEY1 homolog 1
gi|1839188|gb|AAB58375.1| root hair defective 3
[Arabidopsis thaliana] gi|20260178|gb|AAM12987.1|
unknown protein [Arabidopsis thaliana]
gi|22136246|gb|AAM91201.1| unknown protein [Arabidopsis
thaliana] gi|332641908|gb|AEE75429.1| Root hair
defective 3 [Arabidopsis thaliana]
Length = 802
Score = 76.6 bits (187), Expect = 6e-12
Identities = 48/106 (45%), Positives = 64/106 (60%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
+LV KALWVQL+++ FQNG+LPG+L+LST+F+PTVMNLL+KLA+EG
Sbjct: 711 YLVSKALWVQLNISGEFQNGVLPGLLSLSTKFIPTVMNLLKKLAEEGQAPPTN------- 763
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQSCVEYPTA 319
QS+ +Q V TT ++SS SS SSP V T+
Sbjct: 764 ---SNQSMNSTAQSEV---TTNGESSSSSSS--GSSPAKNVPIDTS 801
>dbj|BAF02124.1| root hair defective 3 [Arabidopsis thaliana]
Length = 585
Score = 76.6 bits (187), Expect = 6e-12
Identities = 48/106 (45%), Positives = 64/106 (60%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
+LV KALWVQL+++ FQNG+LPG+L+LST+F+PTVMNLL+KLA+EG
Sbjct: 494 YLVSKALWVQLNISGEFQNGVLPGLLSLSTKFIPTVMNLLKKLAEEGQAPPTN------- 546
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQSCVEYPTA 319
QS+ +Q V TT ++SS SS SSP V T+
Sbjct: 547 ---SNQSMNSTAQSEV---TTNGESSSSSSS--GSSPAKNVPIDTS 584
>ref|XP_006342985.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Solanum tuberosum]
Length = 815
Score = 76.3 bits (186), Expect = 8e-12
Identities = 32/47 (68%), Positives = 45/47 (95%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEG 142
+L+FKALWVQ+D++ F+NG+LPG+L+LST+FLPTVMNLL++LA+EG
Sbjct: 714 YLLFKALWVQMDISGEFRNGVLPGLLSLSTKFLPTVMNLLKRLAEEG 760
>ref|XP_006858355.1| hypothetical protein AMTR_s00064p00178110 [Amborella trichopoda]
gi|548862462|gb|ERN19822.1| hypothetical protein
AMTR_s00064p00178110 [Amborella trichopoda]
Length = 801
Score = 75.9 bits (185), Expect = 1e-11
Identities = 39/90 (43%), Positives = 61/90 (67%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
+L+ KALWVQLD++ F+NG LPGIL+LST+ +PT+MNLL++LADEG +
Sbjct: 713 YLLSKALWVQLDISGEFRNGALPGILSLSTKLVPTIMNLLKRLADEGQK--FAPPEPPRN 770
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLS 271
+LD+QS +++ + + S + +SSL+
Sbjct: 771 PMLDSQSFKKELHKDLSSDSFGVEYSSSLT 800
>ref|XP_004235599.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like isoform 2 [Solanum
lycopersicum]
Length = 815
Score = 75.9 bits (185), Expect = 1e-11
Identities = 31/47 (65%), Positives = 45/47 (95%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEG 142
+L+FKALWVQ+D++ F+NG+LPG+L+LST+FLPT+MNLL++LA+EG
Sbjct: 714 YLLFKALWVQMDISGEFRNGVLPGLLSLSTKFLPTIMNLLKRLAEEG 760
>ref|XP_004235598.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like isoform 1 [Solanum
lycopersicum]
Length = 817
Score = 75.9 bits (185), Expect = 1e-11
Identities = 31/47 (65%), Positives = 45/47 (95%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEG 142
+L+FKALWVQ+D++ F+NG+LPG+L+LST+FLPT+MNLL++LA+EG
Sbjct: 716 YLLFKALWVQMDISGEFRNGVLPGLLSLSTKFLPTIMNLLKRLAEEG 762
>ref|XP_004952515.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3-like [Setaria italica]
Length = 805
Score = 75.5 bits (184), Expect = 1e-11
Identities = 33/49 (67%), Positives = 43/49 (87%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGAR 148
FLV KA+WVQLD+A FQNG LP +L+LST+F+PT+MN+L++LADEG R
Sbjct: 711 FLVGKAIWVQLDIAAEFQNGFLPALLSLSTKFVPTIMNILKRLADEGQR 759
>ref|XP_006298948.1| hypothetical protein CARUB_v10015073mg [Capsella rubella]
gi|482567657|gb|EOA31846.1| hypothetical protein
CARUB_v10015073mg [Capsella rubella]
Length = 818
Score = 75.5 bits (184), Expect = 1e-11
Identities = 47/106 (44%), Positives = 64/106 (60%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGARXXXXXXXXXXX 181
+L+ KALWVQL+++ F+NG LPG+L+LST+FLPTVMNLL+KLA+EG
Sbjct: 726 YLISKALWVQLNISGEFRNGALPGLLSLSTKFLPTVMNLLKKLAEEGQAPPTN------- 778
Query: 182 XLLDAQSLRRDSQRHVPSLTTQAPNASSLSSITDSSPQSCVEYPTA 319
QS+ +Q V TT ++SS SS + SSP V T+
Sbjct: 779 ---SNQSMNSSAQSEV---TTNGESSSS-SSSSGSSPVKTVPIDTS 817
>gb|EPS65304.1| hypothetical protein M569_09474, partial [Genlisea aurea]
Length = 853
Score = 74.3 bits (181), Expect = 3e-11
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEG 142
FL+ KALWVQ+D++ F+NG LPGIL+LST+FLP VMNLLRKLA+EG
Sbjct: 740 FLLVKALWVQMDISGEFRNGALPGILSLSTKFLPAVMNLLRKLAEEG 786
>gb|EMT32595.1| hypothetical protein F775_05472 [Aegilops tauschii]
Length = 764
Score = 74.3 bits (181), Expect = 3e-11
Identities = 32/48 (66%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGA 145
FLV KA+WVQLD+A F+NG LP +L+LST+F+PT+MN+L++LADEGA
Sbjct: 670 FLVGKAMWVQLDIANEFRNGFLPALLSLSTKFVPTIMNILKRLADEGA 717
>gb|EMS46326.1| Protein ROOT HAIR DEFECTIVE 3 [Triticum urartu]
Length = 862
Score = 74.3 bits (181), Expect = 3e-11
Identities = 32/48 (66%), Positives = 43/48 (89%)
Frame = +2
Query: 2 FLVFKALWVQLDVAEMFQNGILPGILTLSTRFLPTVMNLLRKLADEGA 145
FLV KA+WVQLD+A F+NG LP +L+LST+F+PT+MN+L++LADEGA
Sbjct: 670 FLVGKAMWVQLDIANEFRNGFLPALLSLSTKFVPTIMNILKRLADEGA 717