BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044370
         (831 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chl...   365   1e-98
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   364   2e-98
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl...   362   7e-98
gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indi...   362   9e-98
ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group] g...   360   4e-97
gb|AFW75755.1| hypothetical protein ZEAMMB73_425131 [Zea mays]        358   1e-96
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S...   358   1e-96
gb|ACG41877.1| RNA binding protein [Zea mays]                         358   1e-96
ref|NP_001140404.1| RNA binding protein [Zea mays] gi|194699356|...   358   1e-96
ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citr...   358   2e-96
ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citr...   358   2e-96
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl...   357   2e-96
gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [...   355   8e-96
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   352   7e-95
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   350   4e-94
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor...   350   5e-94
ref|XP_002301949.1| pseudouridine synthase family protein [Popul...   348   1e-93
ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutr...   348   1e-93
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A...   348   2e-93
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   348   2e-93

>ref|XP_006656497.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Oryza
           brachyantha]
          Length = 442

 Score =  365 bits (936), Expect = 1e-98
 Identities = 187/279 (67%), Positives = 220/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V  G  ++RID+WISSR+ G  VSRAR+Q+SI++GLV+VNGR V+K SH+VKGGDMV 
Sbjct: 61  EAVPAGEGRSRIDAWISSRLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDMVS 120

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAEPEDIPLDIVYED+H+LVVNKPAHMVVHPAPGN NGTLVNAILHHC++ 
Sbjct: 121 CTVSELQPLRAEPEDIPLDIVYEDQHLLVVNKPAHMVVHPAPGNANGTLVNAILHHCKIS 180

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  N +                  +Q+T   +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 181 TFTCLARN-STDDECPDSSDDDIDVFHVDQFTTGEVSSEVREALVRPGIVHRLDKGTSGL 239

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G PNP+SGRIEVPIARD NNRIRM A  G
Sbjct: 240 LVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPG 299

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR+AASRYKV E FA GG+A+V+W+LETGRTHQ
Sbjct: 300 -SGHRYARHAASRYKVREVFAGGGSALVEWKLETGRTHQ 337


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  364 bits (934), Expect = 2e-98
 Identities = 182/271 (67%), Positives = 213/271 (78%), Gaps = 2/271 (0%)
 Frame = +1

Query: 25  KTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCMVSKLQPLR 204
           K R+DSWISSRI G+SRAR+QSSI+SGLVSVN R V+K SHV++ GD V C +S+LQPLR
Sbjct: 76  KLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGDKVNCTISELQPLR 135

Query: 205 AEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTMACVKSNQA 384
           AEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGN +GTLVN ILHHC LPT+A    +  
Sbjct: 136 AEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHCSLPTVALPNRDSE 195

Query: 385 XXXXXXXXXXXXXXXLCTEQYT--AEGIDLENCDALIRPGIVHRLDKGTSGLLVVAKDDH 558
                          +  +++   A G +   C+  IRPGIVHRLDKGTSGLLVVAKD+H
Sbjct: 196 EDD------------ISDDEFNSFAAGQNCGTCETNIRPGIVHRLDKGTSGLLVVAKDEH 243

Query: 559 SHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLNNSRHAR 738
           SH+HL+EQFK H+IHRVYISLTSG+P P SGR+E+P+ RD NNRIRM AV G +NS  AR
Sbjct: 244 SHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGPSNSGQAR 303

Query: 739 YAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
           +AASRYKVIE  A GG+A+V+WRLETGRTHQ
Sbjct: 304 HAASRYKVIEILAAGGSALVEWRLETGRTHQ 334


>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
           [Setaria italica]
          Length = 437

 Score =  362 bits (930), Expect = 7e-98
 Identities = 184/279 (65%), Positives = 221/279 (79%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V  G  ++R+D+WIS+R+ G  VSRAR+Q+SI++GLV+VNGR V+K SH+VKGGD+V 
Sbjct: 59  EAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHMVKGGDLVS 118

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN NGTLVNAILHHCR+ 
Sbjct: 119 CTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCRIS 178

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  N +                  +Q+T E +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 179 TFTCLARN-STGDECPDSSDDDVDVFDVDQFTTEDVSSEVRNALVRPGIVHRLDKGTSGL 237

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G+P+P+SGRIE  IARD NNRIRM A++G
Sbjct: 238 LVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGVPHPNSGRIEASIARDPNNRIRMIAIAG 297

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR+AASRYKV E FA GG+A+V+WRLETGRTHQ
Sbjct: 298 -SGQRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQ 335


>gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indica Group]
          Length = 445

 Score =  362 bits (929), Expect = 9e-98
 Identities = 187/279 (67%), Positives = 219/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V  G  ++RID+WIS+R+ G  VSRARIQ+SI++GLV VNGR V+K SH+VKGGD+V 
Sbjct: 63  EAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGDIVS 122

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAEPEDIPLDIVYED+H+LVVNKPAHMVVHPAPGN NGTLVNAILHHC++ 
Sbjct: 123 CTVSELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNAILHHCKIS 182

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  N +                  +Q+T   +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 183 TFTCLARN-SIDDECPDSSDDDIDVFDIDQFTTGEVSSEVREALVRPGIVHRLDKGTSGL 241

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G PNP+SGRIEVPIARD NNRIRM A  G
Sbjct: 242 LVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPG 301

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR+AASRYKV E FA GG+A+V+WRLETGRTHQ
Sbjct: 302 -SGHRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQ 339


>ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group]
           gi|75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA
           pseudouridine synthase 2, chloroplastic; AltName:
           Full=RNA pseudouridylate synthase 2; AltName:
           Full=RNA-uridine isomerase 2; Flags: Precursor
           gi|53791796|dbj|BAD53590.1| ribosomal large subunit
           pseudouridine synthase-like [Oryza sativa Japonica
           Group] gi|54291043|dbj|BAD61720.1| ribosomal large
           subunit pseudouridine synthase-like [Oryza sativa
           Japonica Group] gi|113596634|dbj|BAF20508.1|
           Os06g0717400 [Oryza sativa Japonica Group]
           gi|215706335|dbj|BAG93191.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222636236|gb|EEE66368.1| hypothetical protein
           OsJ_22675 [Oryza sativa Japonica Group]
          Length = 445

 Score =  360 bits (923), Expect = 4e-97
 Identities = 186/279 (66%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V  G  ++RID+WIS+R+ G  VSRARIQ+SI++GLV VNGR V+K SH+VKGGD+V 
Sbjct: 63  EAVPAGEGRSRIDAWISARLGGGGVSRARIQASIRAGLVVVNGRPVSKVSHMVKGGDIVS 122

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C V +LQPLRAEPEDIPLDIVYED+H+LVVNKPAHMVVHPAPGN NGTLVNAILHHC++ 
Sbjct: 123 CTVLELQPLRAEPEDIPLDIVYEDDHLLVVNKPAHMVVHPAPGNANGTLVNAILHHCKIS 182

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  N +                  +Q+T   +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 183 TFTCLARN-SIDDECPDSSDDDIDVFDIDQFTTGEVSSEVREALVRPGIVHRLDKGTSGL 241

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G PNP+SGRIEVPIARD NNRIRM A  G
Sbjct: 242 LVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGAPNPNSGRIEVPIARDPNNRIRMIATPG 301

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR+AASRYKV E FA GG+A+V+WRLETGRTHQ
Sbjct: 302 -SGHRYARHAASRYKVREVFAGGGSALVEWRLETGRTHQ 339


>gb|AFW75755.1| hypothetical protein ZEAMMB73_425131 [Zea mays]
          Length = 350

 Score =  358 bits (919), Expect = 1e-96
 Identities = 184/279 (65%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V VG  ++R+D+WIS+R+ G  VSRAR+Q+SI++GLV+VNGR V+K SH VKGGD+V 
Sbjct: 61  EAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVS 120

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN  GTLVNAILHHC++ 
Sbjct: 121 CTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNAILHHCKIS 180

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  + A                  +Q+ AE +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 181 TFTCLARSSA-GDECPDSTDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRLDKGTSGL 239

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G PNP+SGRIE  IARD NNRIRM A++G
Sbjct: 240 LVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRIRMTAIAG 299

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR AASRYKV E FA GG+A+V+WRLETGRTHQ
Sbjct: 300 -SGHRYARNAASRYKVREVFAGGGSALVEWRLETGRTHQ 337


>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
           gi|241917257|gb|EER90401.1| hypothetical protein
           SORBIDRAFT_10g030300 [Sorghum bicolor]
          Length = 441

 Score =  358 bits (919), Expect = 1e-96
 Identities = 183/279 (65%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V VG  ++RID+WIS+R+ G  VSRAR+Q+SI++GLV+VNGR V+K SH VKGGD+V 
Sbjct: 64  EAVPVGEGRSRIDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVS 123

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN NGTLVNAILHHC++ 
Sbjct: 124 CTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNANGTLVNAILHHCKIS 183

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+ +  +                  +Q+  E    E  +AL+RPGIVHRLDKGTSGL
Sbjct: 184 TFTCL-ARSSTGDECLDSSDDDIDVFNVDQFATEDASSEVRNALVRPGIVHRLDKGTSGL 242

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G+PNP+SGRIE  IARD NNRIRM A++G
Sbjct: 243 LVVAKDEHSHAQLAEQFKLHTIRRVYISLTCGVPNPNSGRIEASIARDPNNRIRMIAIAG 302

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR+AASRYKV E F  GG+A+V+WRLETGRTHQ
Sbjct: 303 -SGHRYARHAASRYKVREVFVGGGSALVEWRLETGRTHQ 340


>gb|ACG41877.1| RNA binding protein [Zea mays]
          Length = 439

 Score =  358 bits (919), Expect = 1e-96
 Identities = 184/279 (65%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V VG  ++R+D+WIS+R+ G  VSRAR+Q+SI++GLV+VNGR V+K SH VKGGD+V 
Sbjct: 61  EAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVS 120

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN  GTLVNAILHHC++ 
Sbjct: 121 CTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNAILHHCKIS 180

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  + A                  +Q+ AE +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 181 TFTCLARSSA-GDECPDSSDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRLDKGTSGL 239

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G PNP+SGRIE  IARD NNRIRM A++G
Sbjct: 240 LVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRIRMTAIAG 299

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR AASRYKV E FA GG+A+V+WRLETGRTHQ
Sbjct: 300 -SGHRYARNAASRYKVREVFAGGGSALVEWRLETGRTHQ 337


>ref|NP_001140404.1| RNA binding protein [Zea mays] gi|194699356|gb|ACF83762.1| unknown
           [Zea mays] gi|413943105|gb|AFW75754.1| RNA binding
           protein [Zea mays]
          Length = 419

 Score =  358 bits (919), Expect = 1e-96
 Identities = 184/279 (65%), Positives = 218/279 (78%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V VG  ++R+D+WIS+R+ G  VSRAR+Q+SI++GLV+VNGR V+K SH VKGGD+V 
Sbjct: 61  EAVPVGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVKGGDLVS 120

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAE EDIPLDIVYED+HVLVVNKPAHMVVHPAPGN  GTLVNAILHHC++ 
Sbjct: 121 CTVSELQPLRAEAEDIPLDIVYEDDHVLVVNKPAHMVVHPAPGNAKGTLVNAILHHCKIS 180

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  + A                  +Q+ AE +  E  +AL+RPGIVHRLDKGTSGL
Sbjct: 181 TFTCLARSSA-GDECPDSTDEDTDVFHVDQFAAEDVSSEVRNALVRPGIVHRLDKGTSGL 239

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI RVYISLT G PNP+SGRIE  IARD NNRIRM A++G
Sbjct: 240 LVVAKDEHSHARLAEQFKLHTIRRVYISLTCGAPNPNSGRIEASIARDPNNRIRMTAIAG 299

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR AASRYKV E FA GG+A+V+WRLETGRTHQ
Sbjct: 300 -SGHRYARNAASRYKVREVFAGGGSALVEWRLETGRTHQ 337


>ref|XP_006435255.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537377|gb|ESR48495.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 341

 Score =  358 bits (918), Expect = 2e-96
 Identities = 187/277 (67%), Positives = 215/277 (77%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCM 180
           E V+    K R+D+WISSRI G+SRAR+QSSI+SGLVSVNG+ V+K SH VKGGDMV C 
Sbjct: 62  ETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVKGGDMVNCT 121

Query: 181 VSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTM 360
           +S+LQPLRAE EDIPLDIVYED++VLVVNKPAHMVVHPAPGN  GTLVN ILHHC LPT+
Sbjct: 122 ISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTL 181

Query: 361 ACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLV 540
           A   SNQ                +  ++  +  I      A IRPGIVHRLDKGTSGLLV
Sbjct: 182 A--SSNQ--------EAFSDAEDISDDEEFSSSIS----GASIRPGIVHRLDKGTSGLLV 227

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAKD+HSH+HL+EQFK HTI RVYISLTSG+P+ SSGRIEVPI+RD NNRIRMAA+ G N
Sbjct: 228 VAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSN 287

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
               AR+AASRYKVIE  A GG+A+V+WRLETGRTHQ
Sbjct: 288 KHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQ 324


>ref|XP_006435254.1| hypothetical protein CICLE_v10001736mg [Citrus clementina]
           gi|557537376|gb|ESR48494.1| hypothetical protein
           CICLE_v10001736mg [Citrus clementina]
          Length = 324

 Score =  358 bits (918), Expect = 2e-96
 Identities = 187/277 (67%), Positives = 215/277 (77%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCM 180
           E V+    K R+D+WISSRI G+SRAR+QSSI+SGLVSVNG+ V+K SH VKGGDMV C 
Sbjct: 62  ETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSVNGQVVSKVSHNVKGGDMVNCT 121

Query: 181 VSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTM 360
           +S+LQPLRAE EDIPLDIVYED++VLVVNKPAHMVVHPAPGN  GTLVN ILHHC LPT+
Sbjct: 122 ISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTL 181

Query: 361 ACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLV 540
           A   SNQ                +  ++  +  I      A IRPGIVHRLDKGTSGLLV
Sbjct: 182 A--SSNQ--------EAFSDAEDISDDEEFSSSIS----GASIRPGIVHRLDKGTSGLLV 227

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAKD+HSH+HL+EQFK HTI RVYISLTSG+P+ SSGRIEVPI+RD NNRIRMAA+ G N
Sbjct: 228 VAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSN 287

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
               AR+AASRYKVIE  A GG+A+V+WRLETGRTHQ
Sbjct: 288 KHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQ 324


>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
           sinensis]
          Length = 421

 Score =  357 bits (917), Expect = 2e-96
 Identities = 186/277 (67%), Positives = 215/277 (77%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCM 180
           E V+    K R+D+WISSRI G+SRAR+QSSI+SGLVS+NG+ V+K SH VKGGDMV C 
Sbjct: 62  ETVDTKAGKLRLDAWISSRIDGISRARVQSSIRSGLVSINGQVVSKVSHNVKGGDMVNCT 121

Query: 181 VSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTM 360
           +S+LQPLRAE EDIPLDIVYED++VLVVNKPAHMVVHPAPGN  GTLVN ILHHC LPT+
Sbjct: 122 ISELQPLRAEAEDIPLDIVYEDDNVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTL 181

Query: 361 ACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLV 540
           A   SNQ                +  ++  +  I      A IRPGIVHRLDKGTSGLLV
Sbjct: 182 A--SSNQ--------EAFSDAEDISDDEEFSSSIS----GASIRPGIVHRLDKGTSGLLV 227

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAKD+HSH+HL+EQFK HTI RVYISLTSG+P+ SSGRIEVPI+RD NNRIRMAA+ G N
Sbjct: 228 VAKDEHSHAHLSEQFKLHTIERVYISLTSGVPSQSSGRIEVPISRDPNNRIRMAAIPGSN 287

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
               AR+AASRYKVIE  A GG+A+V+WRLETGRTHQ
Sbjct: 288 KHGQARHAASRYKVIEILAGGGSALVEWRLETGRTHQ 324


>gb|EOY15125.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
          Length = 433

 Score =  355 bits (912), Expect = 8e-96
 Identities = 179/269 (66%), Positives = 209/269 (77%)
 Frame = +1

Query: 25  KTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCMVSKLQPLR 204
           K R+DSWISSRI+G+SRAR+QSSIKSGLV+VNGR V+K SH ++ GD V C++S+LQPLR
Sbjct: 79  KLRLDSWISSRIQGISRARVQSSIKSGLVTVNGRVVDKVSHGLRHGDKVNCVISELQPLR 138

Query: 205 AEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTMACVKSNQA 384
           AEPEDIPLDIVYED+HVLVVNKP HMVVHPAPGN  GTLVN ILHHC LPT+A    ++ 
Sbjct: 139 AEPEDIPLDIVYEDDHVLVVNKPPHMVVHPAPGNATGTLVNGILHHCSLPTVAL---SEK 195

Query: 385 XXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLVVAKDDHSH 564
                           C     A         A +RPGIVHRLDKGTSGLLVVAKD+HSH
Sbjct: 196 EVLSDTEDVSDDDEGFCYGASAA---------ASVRPGIVHRLDKGTSGLLVVAKDEHSH 246

Query: 565 SHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLNNSRHARYA 744
           SHL+EQFKQHTI RVYISLT G+P+PS+GR+++ I RDSNNR+RM AV GLN+   AR+A
Sbjct: 247 SHLSEQFKQHTIQRVYISLTCGVPSPSAGRVDISIGRDSNNRVRMIAVPGLNHHGRARHA 306

Query: 745 ASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
           ASRYKVIE  A GG+A++QWRLETGRTHQ
Sbjct: 307 ASRYKVIEVLAGGGSALIQWRLETGRTHQ 335


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  352 bits (904), Expect = 7e-95
 Identities = 174/277 (62%), Positives = 213/277 (76%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCM 180
           E V+V   K R+DSWIS RI G+SRAR+QSSI++GLVSVNGR ++K SH VK GD++ C 
Sbjct: 68  ETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCT 127

Query: 181 VSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTM 360
           +S+LQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGN  GTLVNAIL+HC LP +
Sbjct: 128 ISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV 187

Query: 361 ACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLV 540
           A                      +  +++++ G+     +A IRPGIVHRLDKGTSGLLV
Sbjct: 188 ATSTGEN-----------ESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLV 236

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAKD+HSH+HL+ QFKQH+I RVYISLT G+P  ++GRIE+PI RD NNRIRM A+ G  
Sbjct: 237 VAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTK 296

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
           N+ HA+YAASRY V+E  A+GG+++V+WRLETGRTHQ
Sbjct: 297 NNPHAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQ 333


>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
           chloroplastic-like [Cucumis sativus]
          Length = 452

 Score =  350 bits (898), Expect = 4e-94
 Identities = 175/277 (63%), Positives = 213/277 (76%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCM 180
           E V+V   K R+DSWIS RI G+SRAR+QSSI++GLVSVNGR ++K SH VK GD++ C 
Sbjct: 68  ETVDVNPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCT 127

Query: 181 VSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTM 360
           +S+LQPLRAEPEDI LDIVYEDEHVLVVNKPAHMVVHPAPGN  GTLVNAIL+HC LP +
Sbjct: 128 ISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMV 187

Query: 361 ACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLV 540
           A                      +  +++++ G+     +A IRPGIVHRLDKGTSGLLV
Sbjct: 188 ATSTGEN-----------ESDSDVSDDEFSSIGVFSRVSEAPIRPGIVHRLDKGTSGLLV 236

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAKD+HSH+HL+ QFKQH+I RVYISLT G+P  ++GRIE+PI RD NNRIRM A+ G N
Sbjct: 237 VAKDEHSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTN 296

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
           N  HA+YAASRY V+E  A+GG+++V+WRLETGRTHQ
Sbjct: 297 NP-HAKYAASRYNVMEILAQGGSSLVEWRLETGRTHQ 332


>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
           [Brachypodium distachyon]
          Length = 439

 Score =  350 bits (897), Expect = 5e-94
 Identities = 179/279 (64%), Positives = 215/279 (77%), Gaps = 2/279 (0%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRG--VSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVY 174
           E V  G  ++R+D+WIS+R+ G  VSRAR+Q+SI++GLV+VNGR V+K S  VKGGD V 
Sbjct: 59  EAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSQTVKGGDTVS 118

Query: 175 CMVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLP 354
           C VS+LQPLRAE EDIPLDIVYEDEH+LVVNKPAHMVVHPAPGN NGTLVNAILHHC++ 
Sbjct: 119 CTVSELQPLRAEAEDIPLDIVYEDEHLLVVNKPAHMVVHPAPGNANGTLVNAILHHCKIS 178

Query: 355 TMACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGL 534
           T  C+  N +                  +Q+  E +  E  DA++RPGIVHRLDKGTSGL
Sbjct: 179 TFTCLARN-SIDDECPESSDDDIDVFDVDQFNGE-VSSEVRDAIVRPGIVHRLDKGTSGL 236

Query: 535 LVVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSG 714
           LVVAKD+HSH+ LAEQFK HTI R+YISLT G+PNP+S RIEVPI+RD NNRIRM A  G
Sbjct: 237 LVVAKDEHSHAQLAEQFKLHTIRRIYISLTCGVPNPNSARIEVPISRDPNNRIRMIAAPG 296

Query: 715 LNNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +  R+AR+AASRYKV E F  GG+A+V+W+LETGRTHQ
Sbjct: 297 -SGHRYARHAASRYKVREVFCSGGSALVEWKLETGRTHQ 334


>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
           gi|222843675|gb|EEE81222.1| pseudouridine synthase
           family protein [Populus trichocarpa]
          Length = 444

 Score =  348 bits (894), Expect = 1e-93
 Identities = 180/277 (64%), Positives = 211/277 (76%)
 Frame = +1

Query: 1   EKVEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCM 180
           E V+    K+R+DSWISSRI G+SRAR+QSSIKSGLVSVNG+ ++K SH VK GD V C+
Sbjct: 85  ESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVSVNGKVIDKVSHNVKAGDKVNCV 144

Query: 181 VSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTM 360
           +S+LQPLRAEPE+IPLDIVYEDE+VLVVNKPAHMVVHPAPGN  GTLVN ILHHC LPT+
Sbjct: 145 ISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHPAPGNATGTLVNGILHHCSLPTV 204

Query: 361 ACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLV 540
               S+Q                LC+  Y A           +RPGIVHRLDKGTSGLLV
Sbjct: 205 ----SSQEVLSGAEDVSDDDDEGLCSSSYAAS----------VRPGIVHRLDKGTSGLLV 250

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAKD+HSH+HL+EQFK HTI RVY+SLT G+P P +GRI+VPI RD +NRIRMAA+   N
Sbjct: 251 VAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVPIGRDVSNRIRMAAIVEPN 310

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
             + AR+AASRYKVIE  A GG+A+V+WRLETGRTHQ
Sbjct: 311 RGQ-ARHAASRYKVIEILAGGGSALVEWRLETGRTHQ 346


>ref|XP_006390244.1| hypothetical protein EUTSA_v10018588mg [Eutrema salsugineum]
           gi|557086678|gb|ESQ27530.1| hypothetical protein
           EUTSA_v10018588mg [Eutrema salsugineum]
          Length = 432

 Score =  348 bits (893), Expect = 1e-93
 Identities = 180/278 (64%), Positives = 210/278 (75%), Gaps = 1/278 (0%)
 Frame = +1

Query: 1   EKVEVGLQ-KTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYC 177
           E VE  ++ K R+DSWISSR+ GVSRAR+QSSI+ GLVSVNGR V+K SH VK GD V C
Sbjct: 73  ETVEAAVKAKIRLDSWISSRVHGVSRARVQSSIRLGLVSVNGRVVDKVSHNVKAGDEVNC 132

Query: 178 MVSKLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPT 357
            +S+LQPL+AEPEDIPLDIVYED+H+LVVNKPAHMVVHPAPGN  GTLVN ILHHC LP 
Sbjct: 133 TISELQPLKAEPEDIPLDIVYEDKHLLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPC 192

Query: 358 MACVKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLL 537
           +A                         E+ T+      +  A +RPGIVHRLDKGTSGLL
Sbjct: 193 VAYSNPEDDSDEETLSDD---------EEMTSSS----SLAASVRPGIVHRLDKGTSGLL 239

Query: 538 VVAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGL 717
           VVAKD+HSH+HLAEQFK HTI RVYISLTSG+P+PS GR+++PI RD NNRIRMAA+ G 
Sbjct: 240 VVAKDEHSHAHLAEQFKLHTIERVYISLTSGVPSPSQGRVDIPIGRDPNNRIRMAAIPGS 299

Query: 718 NNSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
            +   AR+AASRYKVIE  A GG+A+V+WRLETGRTHQ
Sbjct: 300 LSRGKARHAASRYKVIETLAGGGSALVEWRLETGRTHQ 337


>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
           gi|548833830|gb|ERM96267.1| hypothetical protein
           AMTR_s00001p00157430 [Amborella trichopoda]
          Length = 452

 Score =  348 bits (892), Expect = 2e-93
 Identities = 179/277 (64%), Positives = 204/277 (73%), Gaps = 2/277 (0%)
 Frame = +1

Query: 7   VEVGLQKTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCMVS 186
           V VG +K RIDSW+S+RI  VSRARIQSSI+ G V VNG  + K SH+VK GDMV C VS
Sbjct: 76  VAVGSKKERIDSWLSARIGDVSRARIQSSIRQGFVKVNGLPITKVSHIVKVGDMVDCTVS 135

Query: 187 KLQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTMAC 366
            LQPL+AEPED+PLDI+YED+HVLVVNKPAHMVVHPAPGN NGTLVN ILHHC LP    
Sbjct: 136 HLQPLKAEPEDMPLDIIYEDDHVLVVNKPAHMVVHPAPGNANGTLVNGILHHCTLPAFGL 195

Query: 367 VKSNQAXXXXXXXXXXXXXXXLCTEQYTAEGID--LENCDALIRPGIVHRLDKGTSGLLV 540
                                 C    T    D     C + IRPGIVHRLDKGTSGLLV
Sbjct: 196 PDGELTSESDDE----------CDNGLTMFNPDPISTQCRSSIRPGIVHRLDKGTSGLLV 245

Query: 541 VAKDDHSHSHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLN 720
           VAK++HSH+HL+EQFK HTIHR YISLT G+P+PS+G IE+PIARD NNRIRMAAVSG N
Sbjct: 246 VAKNEHSHAHLSEQFKLHTIHRQYISLTCGVPSPSNGCIEIPIARDMNNRIRMAAVSGQN 305

Query: 721 NSRHARYAASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
           N+R AR A SRY V+E  A GG+A+V+WRL+TGRTHQ
Sbjct: 306 NTRKARLATSRYHVMEVLAGGGSALVEWRLQTGRTHQ 342


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  348 bits (892), Expect = 2e-93
 Identities = 176/269 (65%), Positives = 208/269 (77%)
 Frame = +1

Query: 25  KTRIDSWISSRIRGVSRARIQSSIKSGLVSVNGRTVNKASHVVKGGDMVYCMVSKLQPLR 204
           K R+DSWISSRI G+SRAR+QSSIKSGLVSVNGR V+K SH VK GD V C +S+LQPLR
Sbjct: 71  KLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSHNVKFGDKVTCTISELQPLR 130

Query: 205 AEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNLNGTLVNAILHHCRLPTMACVKSNQA 384
           AEPED+PLDIVYEDEH+LVVNKP HMVVHPAPGN  GTLVN ILHHC LPT+A + S + 
Sbjct: 131 AEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLVNGILHHCNLPTVA-ISSQEV 189

Query: 385 XXXXXXXXXXXXXXXLCTEQYTAEGIDLENCDALIRPGIVHRLDKGTSGLLVVAKDDHSH 564
                               Y++      +C++ IRPGIVHRLDKGTSGLLVVAKD+H+H
Sbjct: 190 LSDAEDRSDDD------ERSYSS------SCESSIRPGIVHRLDKGTSGLLVVAKDEHAH 237

Query: 565 SHLAEQFKQHTIHRVYISLTSGIPNPSSGRIEVPIARDSNNRIRMAAVSGLNNSRHARYA 744
           +HL+EQFKQHTI RVYISLTSG+P+  +GRI++PI RD NNRIRM A+ G      AR+A
Sbjct: 238 AHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMTAIPGPIKQGRARHA 297

Query: 745 ASRYKVIEDFARGGAAMVQWRLETGRTHQ 831
           ASR+KV+E  A GG+A+V+WRLETGRTHQ
Sbjct: 298 ASRFKVVETLAGGGSALVEWRLETGRTHQ 326