BLASTX nr result
ID: Zingiber24_contig00044280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00044280
(248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY22976.1| Cleavage and polyadenylation specificity factor s... 108 6e-22
gb|EOY22975.1| Cleavage and polyadenylation specificity factor 1... 108 6e-22
gb|EOY22974.1| Cleavage and polyadenylation specificity factor 1... 108 6e-22
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 108 7e-22
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 108 7e-22
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 108 7e-22
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 108 7e-22
gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus pe... 107 2e-21
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 107 2e-21
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 107 2e-21
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 106 3e-21
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s... 105 8e-21
ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation spec... 102 4e-20
ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 102 5e-20
ref|XP_006587381.1| PREDICTED: cleavage and polyadenylation spec... 102 7e-20
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 102 7e-20
gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus... 100 3e-19
ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation spec... 99 8e-19
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 99 8e-19
ref|XP_002318462.2| cleavage and polyadenylation specificity fac... 97 3e-18
>gb|EOY22976.1| Cleavage and polyadenylation specificity factor subunit 1 isoform 3
[Theobroma cacao]
Length = 1195
Score = 108 bits (271), Expect = 6e-22
Identities = 57/74 (77%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS SSD+T+ T G DKTN F LLF TLD SIGCI
Sbjct: 1041 WKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDRTSATAGSDKTNRFALLFGTLDGSIGCI 1100
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1101 APLDELTFRRLQSL 1114
>gb|EOY22975.1| Cleavage and polyadenylation specificity factor 160 isoform 2
[Theobroma cacao]
Length = 1257
Score = 108 bits (271), Expect = 6e-22
Identities = 57/74 (77%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS SSD+T+ T G DKTN F LLF TLD SIGCI
Sbjct: 1103 WKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDRTSATAGSDKTNRFALLFGTLDGSIGCI 1162
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1163 APLDELTFRRLQSL 1176
>gb|EOY22974.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 108 bits (271), Expect = 6e-22
Identities = 57/74 (77%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS SSD+T+ T G DKTN F LLF TLD SIGCI
Sbjct: 1303 WKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDRTSATAGSDKTNRFALLFGTLDGSIGCI 1362
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1363 APLDELTFRRLQSL 1376
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 108 bits (270), Expect = 7e-22
Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML+ SSD+T PG DKTN F LLF TLD SIGCI
Sbjct: 1303 WKGQKLLSRAEFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCI 1362
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1363 APLDELTFRRLQSL 1376
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 108 bits (270), Expect = 7e-22
Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML+ SSD+T PG DKTN F LLF TLD SIGCI
Sbjct: 1304 WKGQKLLSRAEFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCI 1363
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1364 APLDELTFRRLQSL 1377
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 108 bits (270), Expect = 7e-22
Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML+ SSD+T PG DKTN F LLF TLD SIGCI
Sbjct: 1303 WKGQKLLSRAEFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCI 1362
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1363 APLDELTFRRLQSL 1376
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 108 bits (270), Expect = 7e-22
Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML+ SSD+T PG DKTN F LLF TLD SIGCI
Sbjct: 1304 WKGQKLLSRAEFHVGAHVTKFLRLQMLATSSDRTGAAPGSDKTNRFALLFGTLDGSIGCI 1363
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1364 APLDELTFRRLQSL 1377
>gb|EMJ21509.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 107 bits (266), Expect = 2e-21
Identities = 55/74 (74%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH G HVTKFL+L MLS SSD+T PG DKTN + LLF TLD SIGCI
Sbjct: 1305 WKGQKLLSRAEFHVGTHVTKFLRLQMLSTSSDRTGTNPGSDKTNRYALLFGTLDGSIGCI 1364
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1365 APLDELTFRRLQSL 1378
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 107 bits (266), Expect = 2e-21
Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML SSD+T+ T G DKTN F LLF TLD SIGCI
Sbjct: 1294 WKGQKLLSRAEFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCI 1353
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1354 APLDELTFRRLQSL 1367
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 107 bits (266), Expect = 2e-21
Identities = 56/74 (75%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML SSD+T+ T G DKTN F LLF TLD SIGCI
Sbjct: 1288 WKGQKLLSRAEFHVGAHVTKFLRLQMLPASSDRTSATQGSDKTNRFALLFGTLDGSIGCI 1347
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1348 APLDELTFRRLQSL 1361
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 106 bits (265), Expect = 3e-21
Identities = 54/74 (72%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAH+TKF++L MLS SSD++ PG DKTN F LLF TLD SIGCI
Sbjct: 1307 WKGQKLLSRAEFHVGAHITKFIRLSMLSTSSDRSGAAPGPDKTNRFALLFGTLDGSIGCI 1366
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1367 APLDELTFRRLQSL 1380
>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 105 bits (261), Expect = 8e-21
Identities = 54/74 (72%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQ+LLSR EFH GAHVTKFL+L ML S+D+T TPG DKTN F LLF LD SIGCI
Sbjct: 1325 WKGQRLLSRAEFHVGAHVTKFLRLQMLPTSTDRTGSTPGSDKTNRFALLFGALDGSIGCI 1384
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1385 APLDELTFRRLQSL 1398
>ref|XP_004514987.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cicer arietinum]
Length = 1447
Score = 102 bits (255), Expect = 4e-20
Identities = 55/74 (74%), Positives = 60/74 (81%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAH+TKFL+L MLS +SD+T PG DKTN F LLF TLD SIGCI
Sbjct: 1294 WKGQKLLSRAEFHVGAHITKFLRLQMLS-TSDKTGSGPGSDKTNRFALLFGTLDGSIGCI 1352
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1353 APLDEITFRRLQSL 1366
>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Glycine max]
Length = 1447
Score = 102 bits (254), Expect = 5e-20
Identities = 55/74 (74%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS +SD+ PG DKTN F LLF TLD SIGCI
Sbjct: 1294 WKGQKLLSRAEFHVGAHVTKFLRLQMLS-TSDRAGAVPGSDKTNRFALLFGTLDGSIGCI 1352
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1353 APLDEITFRRLQSL 1366
>ref|XP_006587381.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Glycine max]
Length = 1217
Score = 102 bits (253), Expect = 7e-20
Identities = 55/74 (74%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS +SD+ PG DKTN F LLF TLD SIGCI
Sbjct: 1064 WKGQKLLSRAEFHVGAHVTKFLRLQMLS-TSDRAGSVPGSDKTNRFALLFGTLDGSIGCI 1122
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1123 APLDEITFRRLQSL 1136
>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Glycine max]
Length = 1449
Score = 102 bits (253), Expect = 7e-20
Identities = 55/74 (74%), Positives = 59/74 (79%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS +SD+ PG DKTN F LLF TLD SIGCI
Sbjct: 1296 WKGQKLLSRAEFHVGAHVTKFLRLQMLS-TSDRAGSVPGSDKTNRFALLFGTLDGSIGCI 1354
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1355 APLDEITFRRLQSL 1368
>gb|ESW24391.1| hypothetical protein PHAVU_004G126600g [Phaseolus vulgaris]
Length = 1445
Score = 100 bits (248), Expect = 3e-19
Identities = 54/74 (72%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L ML +SD+ PG DKTN F LLF TLD SIGCI
Sbjct: 1292 WKGQKLLSRAEFHVGAHVTKFLRLQMLP-TSDRAGSAPGSDKTNRFALLFGTLDGSIGCI 1350
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1351 APLDEITFRRLQSL 1364
>ref|XP_004169296.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like, partial [Cucumis sativus]
Length = 741
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/74 (74%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS SSD+ T DKTN F LLF TLD SIGCI
Sbjct: 588 WKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVS-DKTNRFALLFGTLDGSIGCI 646
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 647 APLDELTFRRLQSL 660
>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/74 (74%), Positives = 58/74 (78%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GAHVTKFL+L MLS SSD+ T DKTN F LLF TLD SIGCI
Sbjct: 1351 WKGQKLLSRAEFHVGAHVTKFLRLQMLSTSSDKACSTVS-DKTNRFALLFGTLDGSIGCI 1409
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1410 APLDELTFRRLQSL 1423
>ref|XP_002318462.2| cleavage and polyadenylation specificity factor family protein
[Populus trichocarpa] gi|550326263|gb|EEE96682.2|
cleavage and polyadenylation specificity factor family
protein [Populus trichocarpa]
Length = 1455
Score = 96.7 bits (239), Expect = 3e-18
Identities = 52/74 (70%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +1
Query: 28 WKGQKLLSRVEFHAGAHVTKFLKL*MLSISSDQTNITPGYDKTNWFTLLFRTLDVSIGCI 207
WKGQKLLSR EFH GA VTKF++L MLS S D++ P DKTN F LLF TLD SIGCI
Sbjct: 1301 WKGQKLLSRAEFHVGALVTKFMRLQMLSPSLDRSGAAPVSDKTNRFALLFGTLDGSIGCI 1360
Query: 208 APLDE-PFRRLQTL 246
APLDE FRRLQ+L
Sbjct: 1361 APLDELTFRRLQSL 1374