BLASTX nr result

ID: Zingiber24_contig00044279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044279
         (325 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458339.1| hypothetical protein SORBIDRAFT_03g031640 [S...    56   6e-06
ref|XP_004235780.1| PREDICTED: probable serine/threonine-protein...    55   1e-05

>ref|XP_002458339.1| hypothetical protein SORBIDRAFT_03g031640 [Sorghum bicolor]
           gi|241930314|gb|EES03459.1| hypothetical protein
           SORBIDRAFT_03g031640 [Sorghum bicolor]
          Length = 692

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
 Frame = +1

Query: 157 SCPNSTPALCGGVNISYPFWKSSDFLQNNNTYCGYQGFNVTCESPYYT--PILLLGND 324
           S   S P LCGGVNISYPF+ +SD   +  +YCGY G  VTC++      P+L LG D
Sbjct: 37  SACRSRPYLCGGVNISYPFYLASD---DGESYCGYPGLAVTCDNNNNNRRPVLKLGGD 91


>ref|XP_004235780.1| PREDICTED: probable serine/threonine-protein kinase At1g18390-like
           [Solanum lycopersicum]
          Length = 663

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/55 (43%), Positives = 31/55 (56%)
 Frame = +1

Query: 160 CPNSTPALCGGVNISYPFWKSSDFLQNNNTYCGYQGFNVTCESPYYTPILLLGND 324
           CP ST   C GV ISYPFW+  ++  +   YCGY GF + C      PI+ L +D
Sbjct: 37  CPKST---CNGVEISYPFWRLDNYNTSAPQYCGYPGFGINCSENQPLPIIYLPSD 88


Top