BLASTX nr result

ID: Zingiber24_contig00044203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00044203
         (232 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278716.1| PREDICTED: nuclear transcription factor Y su...    66   6e-09
emb|CBI31520.3| unnamed protein product [Vitis vinifera]               63   5e-08
ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y su...    56   6e-06

>ref|XP_002278716.1| PREDICTED: nuclear transcription factor Y subunit B-8-like isoform
           1 [Vitis vinifera] gi|359486707|ref|XP_003633465.1|
           PREDICTED: nuclear transcription factor Y subunit
           B-8-like [Vitis vinifera]
          Length = 178

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 37/76 (48%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
 Frame = +2

Query: 2   DYIEPLKLYLQKYRELE--------GGDGTARREMGGSHPGTTTPGEYQVHQQNSLAQNM 157
           DYIEPLK+YLQ+YRELE        GGDG+ARR+  GS PG       Q   Q S  Q M
Sbjct: 102 DYIEPLKVYLQRYRELEGDTRGSARGGDGSARRDAIGSQPGPNA----QFAHQGSFTQAM 157

Query: 158 NYISSAGVVQFIVVDP 205
           NY++S    Q ++V P
Sbjct: 158 NYMNSQAQGQHLIVSP 173


>emb|CBI31520.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/74 (47%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
 Frame = +2

Query: 2   DYIEPLKLYLQKYRE------LEGGDGTARREMGGSHPGTTTPGEYQVHQQNSLAQNMNY 163
           DYIEPLK+YLQ+YRE        GGDG+ARR+  GS PG       Q   Q S  Q MNY
Sbjct: 102 DYIEPLKVYLQRYREGDTRGSARGGDGSARRDAIGSQPGPNA----QFAHQGSFTQAMNY 157

Query: 164 ISSAGVVQFIVVDP 205
           ++S    Q ++V P
Sbjct: 158 MNSQAQGQHLIVSP 171


>ref|XP_003568278.1| PREDICTED: nuclear transcription factor Y subunit B-like
           [Brachypodium distachyon]
          Length = 182

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 8/63 (12%)
 Frame = +2

Query: 2   DYIEPLKLYLQKYRELEG--------GDGTARREMGGSHPGTTTPGEYQVHQQNSLAQNM 157
           DYIEPLK+YLQKYRE+EG        GDG+ +++  G H GT++     + QQ +  Q M
Sbjct: 109 DYIEPLKVYLQKYREMEGDSKLTSKSGDGSVKKDTLGPHTGTSSSSAQGMGQQVAYNQGM 168

Query: 158 NYI 166
            Y+
Sbjct: 169 GYM 171


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