BLASTX nr result
ID: Zingiber24_contig00044158
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00044158
(258 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002522329.1| Upstream activation factor subunit UAF30, pu... 64 3e-08
ref|XP_004148436.1| PREDICTED: upstream activation factor subuni... 59 7e-07
ref|XP_002306454.2| hypothetical protein POPTR_0005s14110g [Popu... 58 2e-06
gb|EMS67367.1| Upstream activation factor subunit spp27 [Triticu... 58 2e-06
ref|XP_003558998.1| PREDICTED: upstream activation factor subuni... 58 2e-06
ref|XP_003558997.1| PREDICTED: upstream activation factor subuni... 58 2e-06
ref|XP_003611801.1| Upstream activation factor subunit spp27 [Me... 58 2e-06
ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [S... 58 2e-06
ref|NP_001148210.1| SWIB/MDM2 domain containing protein [Zea may... 58 2e-06
ref|XP_006650641.1| PREDICTED: upstream activation factor subuni... 57 2e-06
gb|EOX98181.1| SWIB complex BAF60b domain-containing protein, pu... 57 2e-06
gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, pu... 57 2e-06
gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Jap... 57 2e-06
gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays] 57 3e-06
ref|XP_003632462.1| PREDICTED: upstream activation factor subuni... 57 3e-06
emb|CBI23284.3| unnamed protein product [Vitis vinifera] 57 3e-06
ref|NP_001147426.1| LOC100281035 [Zea mays] gi|195611286|gb|ACG2... 57 3e-06
emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera] 57 3e-06
tpg|DAA51565.1| TPA: hypothetical protein ZEAMMB73_913346, parti... 57 3e-06
ref|XP_006852954.1| hypothetical protein AMTR_s00033p00241730 [A... 56 4e-06
>ref|XP_002522329.1| Upstream activation factor subunit UAF30, putative [Ricinus
communis] gi|223538407|gb|EEF40013.1| Upstream
activation factor subunit UAF30, putative [Ricinus
communis]
Length = 322
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+EL+ERLREF+ LEEDFGIDLS KK FIR+QVDLFL
Sbjct: 1 MVSDSELIERLREFLKNSDLNTTTTGIVRRQLEEDFGIDLSDKKAFIREQVDLFL 55
>ref|XP_004148436.1| PREDICTED: upstream activation factor subunit UAF30-like [Cucumis
sativus]
Length = 332
Score = 58.9 bits (141), Expect = 7e-07
Identities = 31/55 (56%), Positives = 36/55 (65%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+EL+ RLR+F+ LEEDFGIDLS KK FIR+QVDLFL
Sbjct: 1 MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFL 55
>ref|XP_002306454.2| hypothetical protein POPTR_0005s14110g [Populus trichocarpa]
gi|550338891|gb|EEE93450.2| hypothetical protein
POPTR_0005s14110g [Populus trichocarpa]
Length = 316
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+EL ERL+EF+ LEEDF IDLS KK FIR+QVDLFL
Sbjct: 1 MVSDSELTERLKEFLRNADLDKTTTGTVRRKLEEDFAIDLSDKKVFIREQVDLFL 55
>gb|EMS67367.1| Upstream activation factor subunit spp27 [Triticum urartu]
Length = 489
Score = 57.8 bits (138), Expect = 2e-06
Identities = 30/56 (53%), Positives = 36/56 (64%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFLT 219
MVSD+ELVERLRE + LEEDFG+DLS KK F+R+QVDL L+
Sbjct: 1 MVSDSELVERLREVLRESDLTTTTTGALRRRLEEDFGVDLSDKKTFVREQVDLLLS 56
>ref|XP_003558998.1| PREDICTED: upstream activation factor subunit spp27-like isoform 2
[Brachypodium distachyon]
Length = 328
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFLT 219
MVSD+ELVERLRE + LEEDFG+DLS KK F+R+QVD+ L+
Sbjct: 1 MVSDSELVERLREVLKDSDLTTTTTGALRRRLEEDFGVDLSDKKAFVREQVDILLS 56
>ref|XP_003558997.1| PREDICTED: upstream activation factor subunit spp27-like isoform 1
[Brachypodium distachyon]
Length = 334
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFLT 219
MVSD+ELVERLRE + LEEDFG+DLS KK F+R+QVD+ L+
Sbjct: 1 MVSDSELVERLREVLKDSDLTTTTTGALRRRLEEDFGVDLSDKKAFVREQVDILLS 56
>ref|XP_003611801.1| Upstream activation factor subunit spp27 [Medicago truncatula]
gi|355513136|gb|AES94759.1| Upstream activation factor
subunit spp27 [Medicago truncatula]
Length = 361
Score = 57.8 bits (138), Expect = 2e-06
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVS++EL++RLREF+ LE DFGIDLS +K FIR+QVDLFL
Sbjct: 1 MVSESELIDRLREFLRNSDLNTTTTSTVRRQLESDFGIDLSDRKSFIREQVDLFL 55
>ref|XP_002466401.1| hypothetical protein SORBIDRAFT_01g007140 [Sorghum bicolor]
gi|241920255|gb|EER93399.1| hypothetical protein
SORBIDRAFT_01g007140 [Sorghum bicolor]
Length = 326
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+ELVERL+E + LEEDFG DLS KK FIR+QVDLFL
Sbjct: 1 MVSDSELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>ref|NP_001148210.1| SWIB/MDM2 domain containing protein [Zea mays]
gi|195616714|gb|ACG30187.1| SWIB/MDM2 domain containing
protein [Zea mays]
Length = 329
Score = 57.8 bits (138), Expect = 2e-06
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+ELVERL+E + LEEDFG DLS KK FIR+QVDLFL
Sbjct: 1 MVSDSELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>ref|XP_006650641.1| PREDICTED: upstream activation factor subunit spp27-like [Oryza
brachyantha]
Length = 338
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFLT 219
MVSD+ELVERLRE + LEEDFG+DLS KK FIR+QVDL L+
Sbjct: 1 MVSDSELVERLREVLRESDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLS 56
>gb|EOX98181.1| SWIB complex BAF60b domain-containing protein, putative [Theobroma
cacao]
Length = 472
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/55 (49%), Positives = 36/55 (65%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD++LV RLRE + LE+DFG+DLS +KGF+RDQ+D+FL
Sbjct: 1 MVSDSDLVTRLREILRDSDLDTATAGSVRRQLEKDFGVDLSDRKGFVRDQIDIFL 55
>gb|ABF99032.1| SWIB complex BAF60b domain-containing protein, putative, expressed
[Oryza sativa Japonica Group]
gi|218193805|gb|EEC76232.1| hypothetical protein
OsI_13647 [Oryza sativa Indica Group]
gi|222625850|gb|EEE59982.1| hypothetical protein
OsJ_12695 [Oryza sativa Japonica Group]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFLT 219
MVSD+ELVERLRE + LEEDFG+DLS KK FIR+QVDL L+
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLS 56
>gb|AAL34119.1|AC090713_6 putative parathymosin [Oryza sativa Japonica Group]
Length = 303
Score = 57.4 bits (137), Expect = 2e-06
Identities = 31/56 (55%), Positives = 36/56 (64%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFLT 219
MVSD+ELVERLRE + LEEDFG+DLS KK FIR+QVDL L+
Sbjct: 1 MVSDSELVERLREVLRSSDLNTTTTAILRRRLEEDFGVDLSDKKLFIREQVDLLLS 56
>gb|AFW67527.1| hypothetical protein ZEAMMB73_352797 [Zea mays]
Length = 316
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD ELVERL+E + LEEDFG DLS KK FIR+QVDLFL
Sbjct: 1 MVSDLELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>ref|XP_003632462.1| PREDICTED: upstream activation factor subunit spp27-like [Vitis
vinifera]
Length = 296
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+ELV RL EF+ LEEDFGIDLS KK FIR+ VDLFL
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFL 55
>emb|CBI23284.3| unnamed protein product [Vitis vinifera]
Length = 303
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+ELV RL EF+ LEEDFGIDLS KK FIR+ VDLFL
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFL 55
>ref|NP_001147426.1| LOC100281035 [Zea mays] gi|195611286|gb|ACG27473.1| SWIB/MDM2
domain containing protein [Zea mays]
gi|413932975|gb|AFW67526.1| SWIB/MDM2 domain containing
protein [Zea mays]
Length = 328
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD ELVERL+E + LEEDFG DLS KK FIR+QVDLFL
Sbjct: 1 MVSDLELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 55
>emb|CAN83123.1| hypothetical protein VITISV_044372 [Vitis vinifera]
Length = 332
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/55 (56%), Positives = 34/55 (61%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
MVSD+ELV RL EF+ LEEDFGIDLS KK FIR+ VDLFL
Sbjct: 1 MVSDSELVARLHEFLRSSDLNTTTTAIVRRKLEEDFGIDLSGKKAFIREHVDLFL 55
>tpg|DAA51565.1| TPA: hypothetical protein ZEAMMB73_913346, partial [Zea mays]
Length = 249
Score = 56.6 bits (135), Expect = 3e-06
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLFL 216
+VSD+ELVERL+E + LEEDFG DLS KK FIR+QVDLFL
Sbjct: 3 LVSDSELVERLQEVLRSSDLNTTTTAALRRRLEEDFGADLSHKKAFIREQVDLFL 57
>ref|XP_006852954.1| hypothetical protein AMTR_s00033p00241730 [Amborella trichopoda]
gi|548856568|gb|ERN14421.1| hypothetical protein
AMTR_s00033p00241730 [Amborella trichopoda]
Length = 287
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +1
Query: 52 MVSDAELVERLREFVXXXXXXXXXXXXXXXXLEEDFGIDLSQKKGFIRDQVDLF 213
MVSD+ELVERL+EF+ LE +FG+DLS+KK FIRDQ++L+
Sbjct: 1 MVSDSELVERLKEFLSTADLNTTTNSTVRKHLENEFGVDLSEKKAFIRDQINLY 54