BLASTX nr result
ID: Zingiber24_contig00043935
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00043935
(236 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349660.1| PREDICTED: cleavage stimulation factor subun... 144 2e-32
ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256... 144 2e-32
ref|XP_004233220.1| PREDICTED: uncharacterized protein LOC101252... 142 5e-32
ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus comm... 142 5e-32
gb|EXB57416.1| Cleavage stimulation factor subunit 2 [Morus nota... 141 8e-32
gb|EMJ01495.1| hypothetical protein PRUPE_ppa004010mg [Prunus pe... 141 8e-32
ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225... 141 8e-32
ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211... 141 8e-32
ref|XP_006473161.1| PREDICTED: bromodomain-containing protein DD... 140 1e-31
ref|XP_006434570.1| hypothetical protein CICLE_v10000749mg [Citr... 140 1e-31
gb|ESW15599.1| hypothetical protein PHAVU_007G085700g [Phaseolus... 140 2e-31
ref|XP_006663254.1| PREDICTED: cleavage stimulation factor subun... 139 3e-31
gb|EOY17424.1| Cleavage stimulation factor 64 kDa subunit, putat... 139 3e-31
ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group] g... 139 3e-31
gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indi... 139 3e-31
ref|XP_006606194.1| PREDICTED: cleavage stimulation factor subun... 139 4e-31
ref|XP_003555417.1| PREDICTED: cleavage stimulation factor subun... 139 4e-31
ref|XP_003536395.1| PREDICTED: cleavage stimulation factor subun... 139 4e-31
ref|XP_004290457.1| PREDICTED: uncharacterized protein LOC101301... 139 5e-31
tpg|DAA38996.1| TPA: hypothetical protein ZEAMMB73_344937, parti... 138 7e-31
>ref|XP_006349660.1| PREDICTED: cleavage stimulation factor subunit 2-like [Solanum
tuberosum]
Length = 509
Score = 144 bits (362), Expect = 2e-32
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV DRETGKPKGYGFCEYKDEET+LSARRNLQGYEINGRQLRVDFAE
Sbjct: 27 QICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETSLSARRNLQGYEINGRQLRVDFAE 86
Query: 56 NDKNADRNREQ 24
NDKN+DRNREQ
Sbjct: 87 NDKNSDRNREQ 97
>ref|XP_002264617.2| PREDICTED: uncharacterized protein LOC100256296 [Vitis vinifera]
gi|297739347|emb|CBI29337.3| unnamed protein product
[Vitis vinifera]
Length = 562
Score = 144 bits (362), Expect = 2e-32
Identities = 69/71 (97%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 QICEEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 85 NDKGADRNREQ 95
>ref|XP_004233220.1| PREDICTED: uncharacterized protein LOC101252047 [Solanum
lycopersicum]
Length = 509
Score = 142 bits (358), Expect = 5e-32
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV D+ETGKPKGYGFCEYKDEETALSARRNL+GYEINGRQLRVDFAE
Sbjct: 27 QICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNLKGYEINGRQLRVDFAE 86
Query: 56 NDKNADRNREQ 24
NDKN+DRNREQ
Sbjct: 87 NDKNSDRNREQ 97
>ref|XP_002527116.1| mRNA splicing factor, putative [Ricinus communis]
gi|223533539|gb|EEF35279.1| mRNA splicing factor,
putative [Ricinus communis]
Length = 509
Score = 142 bits (358), Expect = 5e-32
Identities = 68/70 (97%), Positives = 68/70 (97%)
Frame = -1
Query: 233 ICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 54
IC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN
Sbjct: 27 ICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAEN 86
Query: 53 DKNADRNREQ 24
DKNADRNREQ
Sbjct: 87 DKNADRNREQ 96
>gb|EXB57416.1| Cleavage stimulation factor subunit 2 [Morus notabilis]
Length = 552
Score = 141 bits (356), Expect = 8e-32
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 26 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 85
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 86 NDKGADRNREQ 96
>gb|EMJ01495.1| hypothetical protein PRUPE_ppa004010mg [Prunus persica]
Length = 535
Score = 141 bits (356), Expect = 8e-32
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 85 NDKGADRNREQ 95
>ref|XP_004159476.1| PREDICTED: uncharacterized protein LOC101225147 [Cucumis sativus]
Length = 527
Score = 141 bits (356), Expect = 8e-32
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 85 NDKGADRNREQ 95
>ref|XP_004141001.1| PREDICTED: uncharacterized protein LOC101211663 [Cucumis sativus]
Length = 527
Score = 141 bits (356), Expect = 8e-32
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 85 NDKGADRNREQ 95
>ref|XP_006473161.1| PREDICTED: bromodomain-containing protein DDB_G0280777-like [Citrus
sinensis]
Length = 553
Score = 140 bits (354), Expect = 1e-31
Identities = 67/71 (94%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 EICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 85 NDKGADRNREQ 95
>ref|XP_006434570.1| hypothetical protein CICLE_v10000749mg [Citrus clementina]
gi|557536692|gb|ESR47810.1| hypothetical protein
CICLE_v10000749mg [Citrus clementina]
Length = 553
Score = 140 bits (354), Expect = 1e-31
Identities = 67/71 (94%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 EICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK ADRNREQ
Sbjct: 85 NDKGADRNREQ 95
>gb|ESW15599.1| hypothetical protein PHAVU_007G085700g [Phaseolus vulgaris]
Length = 539
Score = 140 bits (352), Expect = 2e-31
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 27 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 86
Query: 56 NDKNADRNREQ 24
NDK DRNREQ
Sbjct: 87 NDKGTDRNREQ 97
>ref|XP_006663254.1| PREDICTED: cleavage stimulation factor subunit 2 tau variant-like
[Oryza brachyantha]
Length = 471
Score = 139 bits (351), Expect = 3e-31
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV D+ETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 29 QICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 88
Query: 56 NDKNADRNREQ 24
N +NADRNRE+
Sbjct: 89 NGRNADRNREK 99
>gb|EOY17424.1| Cleavage stimulation factor 64 kDa subunit, putative [Theobroma
cacao]
Length = 521
Score = 139 bits (351), Expect = 3e-31
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 25 EICREVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 84
Query: 56 NDKNADRNREQ 24
NDK +DRNREQ
Sbjct: 85 NDKGSDRNREQ 95
>ref|NP_001065883.1| Os11g0176100 [Oryza sativa Japonica Group]
gi|62733690|gb|AAX95801.1| RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain), putative [Oryza sativa
Japonica Group] gi|77548917|gb|ABA91714.1| RNA
recognition motif family protein, expressed [Oryza
sativa Japonica Group] gi|113644587|dbj|BAF27728.1|
Os11g0176100 [Oryza sativa Japonica Group]
gi|215695427|dbj|BAG90666.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222615613|gb|EEE51745.1| hypothetical protein
OsJ_33161 [Oryza sativa Japonica Group]
Length = 495
Score = 139 bits (351), Expect = 3e-31
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV D+ETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 30 QICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 89
Query: 56 NDKNADRNREQ 24
N +NADRNRE+
Sbjct: 90 NGRNADRNREK 100
>gb|EEC67777.1| hypothetical protein OsI_35315 [Oryza sativa Indica Group]
Length = 495
Score = 139 bits (351), Expect = 3e-31
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV D+ETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 30 QICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 89
Query: 56 NDKNADRNREQ 24
N +NADRNRE+
Sbjct: 90 NGRNADRNREK 100
>ref|XP_006606194.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform X2
[Glycine max]
Length = 552
Score = 139 bits (350), Expect = 4e-31
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 27 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 86
Query: 56 NDKNADRNREQ 24
NDK DRNREQ
Sbjct: 87 NDKGNDRNREQ 97
>ref|XP_003555417.1| PREDICTED: cleavage stimulation factor subunit 2-like isoform X1
[Glycine max]
Length = 544
Score = 139 bits (350), Expect = 4e-31
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 27 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 86
Query: 56 NDKNADRNREQ 24
NDK DRNREQ
Sbjct: 87 NDKGNDRNREQ 97
>ref|XP_003536395.1| PREDICTED: cleavage stimulation factor subunit 2-like [Glycine max]
Length = 545
Score = 139 bits (350), Expect = 4e-31
Identities = 66/71 (92%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 27 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 86
Query: 56 NDKNADRNREQ 24
NDK DRNREQ
Sbjct: 87 NDKGNDRNREQ 97
>ref|XP_004290457.1| PREDICTED: uncharacterized protein LOC101301257 [Fragaria vesca
subsp. vesca]
Length = 538
Score = 139 bits (349), Expect = 5e-31
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
+IC+EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 26 EICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 85
Query: 56 NDKNADRNREQ 24
NDK D+NREQ
Sbjct: 86 NDKGTDKNREQ 96
>tpg|DAA38996.1| TPA: hypothetical protein ZEAMMB73_344937, partial [Zea mays]
Length = 163
Score = 138 bits (348), Expect = 7e-31
Identities = 65/72 (90%), Positives = 69/72 (95%)
Frame = -1
Query: 236 QICEEVGPVVSFRLVSDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 57
QICEEVGPVVSFRLV D+ETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE
Sbjct: 62 QICEEVGPVVSFRLVIDKETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAE 121
Query: 56 NDKNADRNREQM 21
N +N DRNRE++
Sbjct: 122 NGRNTDRNREKV 133