BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043843
         (889 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vi...   280   7e-73
ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like ...   279   1e-72
gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indi...   276   6e-72
ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group] g...   276   6e-72
gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   273   6e-71
gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus...   273   6e-71
ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like ...   273   6e-71
ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [S...   270   4e-70
tpg|DAA55515.1| TPA: hypothetical protein ZEAMMB73_032156 [Zea m...   268   2e-69
ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like ...   268   2e-69
gb|ACN26906.1| unknown [Zea mays]                                     268   2e-69
ref|NP_001146958.1| pseudouridylate synthase [Zea mays] gi|19560...   268   2e-69
ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-lik...   266   1e-68
ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycin...   265   1e-68
ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-lik...   264   3e-68
ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Popu...   260   5e-67
gb|EMJ23285.1| hypothetical protein PRUPE_ppa007576m1g, partial ...   260   5e-67
ref|XP_002331109.1| predicted protein [Populus trichocarpa]           260   5e-67
ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus ...   258   3e-66
ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-lik...   256   8e-66

>ref|XP_002263416.1| PREDICTED: tRNA pseudouridine synthase A [Vitis vinifera]
           gi|297739525|emb|CBI29707.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  280 bits (715), Expect = 7e-73
 Identities = 137/207 (66%), Positives = 166/207 (80%), Gaps = 4/207 (1%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KA ERTY+YRL SGPEPLS+FEKDRAWH+ EDLD+LAM+KAC +LVG HDFSSFRA+G
Sbjct: 176 RYKARERTYFYRLLSGPEPLSSFEKDRAWHVPEDLDLLAMQKACRVLVGCHDFSSFRAAG 235

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTD----GCLIHSEKSGHGSPPSSLD 540
           CQAKSPI+TLDEL ++E  P+ +FPS+ ER+Q   T+     C  ++E     SP ++  
Sbjct: 236 CQAKSPIRTLDELCVSEVLPTPYFPSITERAQNNFTEENPLACSNNAEVP--DSPSTANH 293

Query: 539 ITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERIL 360
               G  G  QGFG + RHRC+++ ARARSFLYHQVRL+VGV+K VGTG+LT+SDVERIL
Sbjct: 294 DRLDGFNGAGQGFGVRRRHRCFLVTARARSFLYHQVRLLVGVIKCVGTGDLTVSDVERIL 353

Query: 359 NAKTVTAASPMAPSCGLYLGNVKYDLP 279
           NAKTVTAASPMAP+CGLYLGNV YDLP
Sbjct: 354 NAKTVTAASPMAPACGLYLGNVNYDLP 380


>ref|XP_006663893.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Oryza
           brachyantha]
          Length = 397

 Score =  279 bits (713), Expect = 1e-72
 Identities = 142/209 (67%), Positives = 166/209 (79%), Gaps = 7/209 (3%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SG EPLS FEK  AWHI+EDL++ AMKKAC+ILVG HDFSSFRA+G
Sbjct: 191 RYKALERTYHYRLLSGSEPLSVFEKSSAWHIAEDLNVQAMKKACSILVGHHDFSSFRAAG 250

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDEL++TE FPS+ FPS LERS +E  DG LI+S     E SG GS  S+ 
Sbjct: 251 CQANSPMRTLDELTVTEVFPSMFFPSSLERSDMEPLDGPLIYSRTSVVESSGKGSDASNT 310

Query: 542 DITWVGLQGCNQG--FGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVE 369
                    C  G  FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT +DVE
Sbjct: 311 ----TSESRCESGGEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVE 366

Query: 368 RILNAKTVTAASPMAPSCGLYLGNVKYDL 282
           RILN+KTVTAA PMAP+CGLYL NVKYDL
Sbjct: 367 RILNSKTVTAAPPMAPACGLYLANVKYDL 395


>gb|EEC68990.1| hypothetical protein OsI_37759 [Oryza sativa Indica Group]
          Length = 391

 Score =  276 bits (707), Expect = 6e-72
 Identities = 141/207 (68%), Positives = 164/207 (79%), Gaps = 5/207 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SG EPLS FEK  AWHI EDL++ AMKKAC+ILVG HDFSSFRA+G
Sbjct: 185 RYKALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSFRATG 244

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDELS+TE FPS+ FPS +ERS++ES DG L++S     E SG GS  SS 
Sbjct: 245 CQANSPMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKGSDASST 304

Query: 542 DITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
                   G  + FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT  DVERI
Sbjct: 305 SEQSRFENG--EEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERI 362

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYDL 282
           LN K VTAA PMAP+CGLYL NVKYDL
Sbjct: 363 LNLKAVTAAPPMAPACGLYLANVKYDL 389


>ref|NP_001066352.1| Os12g0194800 [Oryza sativa Japonica Group]
           gi|108862288|gb|ABA96079.2| tRNA pseudouridine synthase
           family protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113648859|dbj|BAF29371.1|
           Os12g0194800 [Oryza sativa Japonica Group]
           gi|215678805|dbj|BAG95242.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222616774|gb|EEE52906.1| hypothetical protein
           OsJ_35509 [Oryza sativa Japonica Group]
          Length = 391

 Score =  276 bits (707), Expect = 6e-72
 Identities = 141/207 (68%), Positives = 164/207 (79%), Gaps = 5/207 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SG EPLS FEK  AWHI EDL++ AMKKAC+ILVG HDFSSFRA+G
Sbjct: 185 RYKALERTYHYRLLSGSEPLSVFEKTSAWHIPEDLNVQAMKKACSILVGHHDFSSFRATG 244

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDELS+TE FPS+ FPS +ERS++ES DG L++S     E SG GS  SS 
Sbjct: 245 CQANSPMRTLDELSVTEVFPSMFFPSSMERSEMESLDGHLVYSRTSVVESSGKGSDASST 304

Query: 542 DITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
                   G  + FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT  DVERI
Sbjct: 305 SEQSRFENG--EEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTEDVERI 362

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYDL 282
           LN K VTAA PMAP+CGLYL NVKYDL
Sbjct: 363 LNLKAVTAAPPMAPACGLYLANVKYDL 389


>gb|ESW20555.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 373

 Score =  273 bits (698), Expect = 6e-71
 Identities = 137/205 (66%), Positives = 165/205 (80%), Gaps = 2/205 (0%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SGPEPLSTFEKDRAWH+SE+L++ AM++AC +LVGSHDFSSFRA+G
Sbjct: 167 RYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSFRAAG 226

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLE--STDGCLIHSEKSGHGSPPSSLDIT 534
           CQAKSPI+TLDEL+++E   SLHFPS+++R   +  S+D     S       P SS  I 
Sbjct: 227 CQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSSPCID 286

Query: 533 WVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNA 354
            V     + GFG++ RHRC V+ ARARSFLYHQVRL+VGVLK+VGTG LTI DVERILNA
Sbjct: 287 KVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNA 346

Query: 353 KTVTAASPMAPSCGLYLGNVKYDLP 279
           K+VT+ASPMAP+CGLYLG VKYDLP
Sbjct: 347 KSVTSASPMAPACGLYLGEVKYDLP 371


>gb|ESW20554.1| hypothetical protein PHAVU_006G218900g [Phaseolus vulgaris]
          Length = 372

 Score =  273 bits (698), Expect = 6e-71
 Identities = 137/205 (66%), Positives = 165/205 (80%), Gaps = 2/205 (0%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SGPEPLSTFEKDRAWH+SE+L++ AM++AC +LVGSHDFSSFRA+G
Sbjct: 166 RYKALERTYFYRLLSGPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSFRAAG 225

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLE--STDGCLIHSEKSGHGSPPSSLDIT 534
           CQAKSPI+TLDEL+++E   SLHFPS+++R   +  S+D     S       P SS  I 
Sbjct: 226 CQAKSPIRTLDELNVSEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSSPCID 285

Query: 533 WVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNA 354
            V     + GFG++ RHRC V+ ARARSFLYHQVRL+VGVLK+VGTG LTI DVERILNA
Sbjct: 286 KVTTSSEDVGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNA 345

Query: 353 KTVTAASPMAPSCGLYLGNVKYDLP 279
           K+VT+ASPMAP+CGLYLG VKYDLP
Sbjct: 346 KSVTSASPMAPACGLYLGEVKYDLP 370


>ref|XP_004977156.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Setaria
           italica]
          Length = 385

 Score =  273 bits (698), Expect = 6e-71
 Identities = 139/206 (67%), Positives = 161/206 (78%), Gaps = 4/206 (1%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SGPE  S FEK+ AWHISEDLDI AMKKAC+ILVG HDFSSFRA+G
Sbjct: 178 RYKALERTYHYRLLSGPESTSVFEKNSAWHISEDLDIQAMKKACSILVGHHDFSSFRAAG 237

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHSEKSG--HGSPPSSLDIT 534
           CQA SP++TLDEL++TE FP + FPS +ERS++ES+DG LI+S           S    T
Sbjct: 238 CQANSPMRTLDELNVTEVFPFMFFPSSIERSEMESSDGSLIYSRTPALEPSRKESDDSCT 297

Query: 533 WVGLQGCNQG--FGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERIL 360
             G      G  FG + RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT +DVERIL
Sbjct: 298 SSGKSESENGKEFGSRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERIL 357

Query: 359 NAKTVTAASPMAPSCGLYLGNVKYDL 282
           NAK VTAA PMAP+CGLYL NVKYDL
Sbjct: 358 NAKKVTAAPPMAPACGLYLANVKYDL 383


>ref|XP_002441964.1| hypothetical protein SORBIDRAFT_08g005650 [Sorghum bicolor]
           gi|241942657|gb|EES15802.1| hypothetical protein
           SORBIDRAFT_08g005650 [Sorghum bicolor]
          Length = 387

 Score =  270 bits (691), Expect = 4e-70
 Identities = 139/207 (67%), Positives = 164/207 (79%), Gaps = 5/207 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YRL SGPE  S FE + AWHISEDLDI AMKKAC+ILVG HDFSSFRA+G
Sbjct: 180 RYKALERTYHYRLLSGPESTSVFETNSAWHISEDLDIQAMKKACSILVGHHDFSSFRAAG 239

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDELS+TE FP + FPS +ERSQLES++G L++S     E SG GS     
Sbjct: 240 CQANSPMRTLDELSVTEVFPFMFFPSSVERSQLESSNGSLVYSRTPDIESSGKGSDLCCT 299

Query: 542 DITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
                 L+   + FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT +DVERI
Sbjct: 300 SSVKSELEN-GEDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERI 358

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYDL 282
           L+AKTVTAA  MAP+ GLYL NVKYDL
Sbjct: 359 LDAKTVTAAPRMAPAYGLYLANVKYDL 385


>tpg|DAA55515.1| TPA: hypothetical protein ZEAMMB73_032156 [Zea mays]
          Length = 443

 Score =  268 bits (685), Expect = 2e-69
 Identities = 135/207 (65%), Positives = 163/207 (78%), Gaps = 5/207 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+K+LERTY+YRL +GPE  S FEK+  WHISEDLDI +MKKAC+ILVG HDFSSFRA+G
Sbjct: 236 RYKSLERTYHYRLLAGPESTSVFEKNSVWHISEDLDIQSMKKACSILVGHHDFSSFRAAG 295

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDELS+TE FP + FPS +ERS+LE ++  L++S     E SG GS  S  
Sbjct: 296 CQANSPVRTLDELSVTEVFPFMFFPSSVERSELELSNVSLVYSRKPDMESSGKGSDGSCT 355

Query: 542 DITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
                  +   + FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT +DVERI
Sbjct: 356 SSVKSDFEN-GKDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERI 414

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYDL 282
           L+AKTVTAA  MAPSCGLYL NVKYDL
Sbjct: 415 LDAKTVTAAPSMAPSCGLYLANVKYDL 441


>ref|XP_003540148.1| PREDICTED: tRNA pseudouridine synthase-like 1-like [Glycine max]
          Length = 369

 Score =  268 bits (685), Expect = 2e-69
 Identities = 137/205 (66%), Positives = 159/205 (77%), Gaps = 2/205 (0%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           RFKA ERTY+YRL SGPEPLSTFEKDRAWH+ E+L + AM++AC +LVG HDFSSFRA+G
Sbjct: 163 RFKAQERTYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGCHDFSSFRAAG 222

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIH-SEKSGHGSPP-SSLDIT 534
           CQAKSPI+TLDELS+ E   S +FPSL++R Q     G L   S  +    PP S+  I 
Sbjct: 223 CQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCSNNTETDIPPISNPSID 282

Query: 533 WVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNA 354
            V     + GFG++ RHRC V+ ARARSFLYHQVRL+VGVLK+ GTG LTI DVERILNA
Sbjct: 283 KVITSSQDAGFGKRRRHRCLVVTARARSFLYHQVRLLVGVLKAAGTGNLTIPDVERILNA 342

Query: 353 KTVTAASPMAPSCGLYLGNVKYDLP 279
           KTVTAASPMAP+CGLYLG VKYDLP
Sbjct: 343 KTVTAASPMAPACGLYLGEVKYDLP 367


>gb|ACN26906.1| unknown [Zea mays]
          Length = 222

 Score =  268 bits (685), Expect = 2e-69
 Identities = 135/207 (65%), Positives = 163/207 (78%), Gaps = 5/207 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+K+LERTY+YRL +GPE  S FEK+  WHISEDLDI +MKKAC+ILVG HDFSSFRA+G
Sbjct: 15  RYKSLERTYHYRLLAGPESTSVFEKNSVWHISEDLDIQSMKKACSILVGHHDFSSFRAAG 74

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDELS+TE FP + FPS +ERS+LE ++  L++S     E SG GS  S  
Sbjct: 75  CQANSPVRTLDELSVTEVFPFMFFPSSVERSELELSNVSLVYSRKPDMESSGKGSDGSCT 134

Query: 542 DITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
                  +   + FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT +DVERI
Sbjct: 135 SSVKSDFEN-GKDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERI 193

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYDL 282
           L+AKTVTAA  MAPSCGLYL NVKYDL
Sbjct: 194 LDAKTVTAAPSMAPSCGLYLANVKYDL 220


>ref|NP_001146958.1| pseudouridylate synthase [Zea mays] gi|195605848|gb|ACG24754.1|
           pseudouridylate synthase [Zea mays]
          Length = 386

 Score =  268 bits (685), Expect = 2e-69
 Identities = 135/207 (65%), Positives = 163/207 (78%), Gaps = 5/207 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+K+LERTY+YRL +GPE  S FEK+  WHISEDLDI +MKKAC+ILVG HDFSSFRA+G
Sbjct: 179 RYKSLERTYHYRLLAGPESTSVFEKNSVWHISEDLDIQSMKKACSILVGHHDFSSFRAAG 238

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGSPPSSL 543
           CQA SP++TLDELS+TE FP + FPS +ERS+LE ++  L++S     E SG GS  S  
Sbjct: 239 CQANSPVRTLDELSVTEVFPFMFFPSSVERSELELSNVSLVYSRKPDMESSGKGSDGSCT 298

Query: 542 DITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
                  +   + FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVGTG+LT +DVERI
Sbjct: 299 SSVKSDFEN-GKDFGKRSRHRCFVVTARARSFLYHQVRLMVGLLKSVGTGDLTTADVERI 357

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYDL 282
           L+AKTVTAA  MAPSCGLYL NVKYDL
Sbjct: 358 LDAKTVTAAPSMAPSCGLYLANVKYDL 384


>ref|XP_004309887.1| PREDICTED: tRNA pseudouridine synthase A-like [Fragaria vesca
           subsp. vesca]
          Length = 350

 Score =  266 bits (679), Expect = 1e-68
 Identities = 132/203 (65%), Positives = 163/203 (80%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           RFKA ERTY+YRL SGPEPLSTFEKDRAWHI E+LD+LAM++AC ILVG HDFSSFRA+G
Sbjct: 156 RFKAQERTYFYRLLSGPEPLSTFEKDRAWHIPEELDVLAMQEACKILVGHHDFSSFRAAG 215

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHSEKSGHGSPPSSLDITWV 528
           CQAKSPI+TLDEL+++E   S +FP++ ER++       L+  +     +P +    ++ 
Sbjct: 216 CQAKSPIRTLDELNVSEVVSSPNFPTIAERTR------NLVQKDIQCTNNPEADCHSSFN 269

Query: 527 GLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNAKT 348
           G  G +QGFG + +HRC V+ ARAR+FLYHQVRL+VGVLK VGTG+L I DVERILNAKT
Sbjct: 270 G--GTDQGFGLRKKHRCIVVTARARAFLYHQVRLLVGVLKCVGTGDLKIPDVERILNAKT 327

Query: 347 VTAASPMAPSCGLYLGNVKYDLP 279
           VTAASPMAP+CGLYLG+V+YDLP
Sbjct: 328 VTAASPMAPACGLYLGHVRYDLP 350


>ref|NP_001242177.1| uncharacterized protein LOC100799818 [Glycine max]
           gi|255637177|gb|ACU18919.1| unknown [Glycine max]
          Length = 370

 Score =  265 bits (678), Expect = 1e-68
 Identities = 133/205 (64%), Positives = 157/205 (76%), Gaps = 2/205 (0%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           RFKA ER Y+YRL SGPEPLSTFEKDRAWH+ E+L + AM++AC +LVG HDFSSFRA+G
Sbjct: 164 RFKAQERIYFYRLLSGPEPLSTFEKDRAWHVPEELSLPAMQEACRVLVGFHDFSSFRAAG 223

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHSEKSGHGS--PPSSLDIT 534
           CQAKSPI+TLDELS+ E   S +FPSL++R Q     G L     +      P S+  I 
Sbjct: 224 CQAKSPIRTLDELSVNEVIESPYFPSLMDREQHNKVSGDLRSCPNNSETDIPPTSNPSID 283

Query: 533 WVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNA 354
            V     + GFG++ RHRC V+ ARAR+FLYHQVRL+VGVLK+VGTG LTI DVERILNA
Sbjct: 284 KVMASSQDVGFGKRRRHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERILNA 343

Query: 353 KTVTAASPMAPSCGLYLGNVKYDLP 279
           +TVTAASPMAP+CGLYLG VKYDLP
Sbjct: 344 RTVTAASPMAPACGLYLGEVKYDLP 368


>ref|XP_003578802.1| PREDICTED: tRNA pseudouridine synthase A-like [Brachypodium
           distachyon]
          Length = 386

 Score =  264 bits (675), Expect = 3e-68
 Identities = 136/208 (65%), Positives = 163/208 (78%), Gaps = 6/208 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KALERTY+YR+ SGPE  S FEK+ AWHI EDL+I AMKKAC +LVG HDFSSFRA+G
Sbjct: 179 RYKALERTYHYRILSGPERQSVFEKNSAWHIPEDLNIQAMKKACDLLVGHHDFSSFRATG 238

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS-----EKSGHGS-PPSS 546
           CQAKSP++TLDEL++TE FP + FPS +ERS++ES DG L++S       S  GS  PS+
Sbjct: 239 CQAKSPVRTLDELTVTEVFPFMFFPSSVERSEMESPDGSLVYSRTSLMRASAEGSDAPST 298

Query: 545 LDITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVER 366
                V   G  Q FG++ RHRC+V+ ARARSFLYHQVRLMVG+LKSVG G+LT +DVER
Sbjct: 299 ASGKSVSENG--QEFGKRLRHRCFVVTARARSFLYHQVRLMVGLLKSVGIGDLTTADVER 356

Query: 365 ILNAKTVTAASPMAPSCGLYLGNVKYDL 282
           IL+AK VTAA PMAP+ GLYL NVKYDL
Sbjct: 357 ILDAKAVTAAPPMAPASGLYLANVKYDL 384


>ref|XP_006389535.1| hypothetical protein POPTR_0022s00690g [Populus trichocarpa]
           gi|550312358|gb|ERP48449.1| hypothetical protein
           POPTR_0022s00690g [Populus trichocarpa]
          Length = 370

 Score =  260 bits (664), Expect = 5e-67
 Identities = 132/206 (64%), Positives = 164/206 (79%), Gaps = 5/206 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           RFKA ERTY+YRL  GPE LSTFEKDRAWH+SE+LD+++M++AC +LVG HDFSSFRASG
Sbjct: 164 RFKAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASG 223

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS--EKSGHGSPPSSLDIT 534
           CQAKSP +TL+ELS+ E   + +FPS+ ER Q  S++G   HS   K   G P  S+   
Sbjct: 224 CQAKSPFRTLEELSVLEVVSTPYFPSITEREQ-NSSNGEGPHSFHNKCKTGLPTGSISNG 282

Query: 533 WV---GLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
           ++      G + GFG + RHRCYVI AR+RSFLYHQVRL+VGVLKSVGTG+LT+SDVERI
Sbjct: 283 FMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERI 342

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYD 285
           LNA+++TAASPMAP+CGLYLG+VKY+
Sbjct: 343 LNARSITAASPMAPACGLYLGHVKYE 368


>gb|EMJ23285.1| hypothetical protein PRUPE_ppa007576m1g, partial [Prunus persica]
          Length = 234

 Score =  260 bits (664), Expect = 5e-67
 Identities = 128/203 (63%), Positives = 159/203 (78%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KA ERTY+YRL SG EPLSTFEKDRAWH+ E+L++ AM++AC +LVG HDFSSFRA+G
Sbjct: 39  RYKAQERTYFYRLLSGAEPLSTFEKDRAWHVPEELNLRAMQEACKVLVGHHDFSSFRAAG 98

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHSEKSGHGSPPSSLDITWV 528
           CQAKSPI+TLDEL+++E   +  FPS++ER Q    +     + KS    PPS       
Sbjct: 99  CQAKSPIRTLDELNVSEVVSTPCFPSIMERKQNNLGEDPHAGTNKSETDPPPSFNG---- 154

Query: 527 GLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNAKT 348
              G + GFG + +HRC+V+ ARAR+FLYHQVRL+VGVLK+VGTG+L + DVERILNAKT
Sbjct: 155 ---GADLGFGLRKKHRCFVVTARARAFLYHQVRLLVGVLKAVGTGDLKVPDVERILNAKT 211

Query: 347 VTAASPMAPSCGLYLGNVKYDLP 279
           VTAASPMAP+CGLYLG+VKYDLP
Sbjct: 212 VTAASPMAPACGLYLGHVKYDLP 234


>ref|XP_002331109.1| predicted protein [Populus trichocarpa]
          Length = 326

 Score =  260 bits (664), Expect = 5e-67
 Identities = 132/206 (64%), Positives = 164/206 (79%), Gaps = 5/206 (2%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           RFKA ERTY+YRL  GPE LSTFEKDRAWH+SE+LD+++M++AC +LVG HDFSSFRASG
Sbjct: 120 RFKAQERTYFYRLLIGPELLSTFEKDRAWHVSEELDLVSMQEACKVLVGHHDFSSFRASG 179

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQLESTDGCLIHS--EKSGHGSPPSSLDIT 534
           CQAKSP +TL+ELS+ E   + +FPS+ ER Q  S++G   HS   K   G P  S+   
Sbjct: 180 CQAKSPFRTLEELSVLEVVSTPYFPSITEREQ-NSSNGEGPHSFHNKCKTGLPTGSISNG 238

Query: 533 WV---GLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERI 363
           ++      G + GFG + RHRCYVI AR+RSFLYHQVRL+VGVLKSVGTG+LT+SDVERI
Sbjct: 239 FMAGGSNSGTDLGFGIRRRHRCYVITARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERI 298

Query: 362 LNAKTVTAASPMAPSCGLYLGNVKYD 285
           LNA+++TAASPMAP+CGLYLG+VKY+
Sbjct: 299 LNARSITAASPMAPACGLYLGHVKYE 324


>ref|XP_002526453.1| pseudouridylate synthase, putative [Ricinus communis]
           gi|223534233|gb|EEF35948.1| pseudouridylate synthase,
           putative [Ricinus communis]
          Length = 372

 Score =  258 bits (658), Expect = 3e-66
 Identities = 130/205 (63%), Positives = 158/205 (77%), Gaps = 2/205 (0%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           RFKA ERTY+YR  SGPEPLSTFEKDRAWH+ EDLDI+AM++AC +LVG HDFSSFRASG
Sbjct: 168 RFKAQERTYFYRFLSGPEPLSTFEKDRAWHVLEDLDIVAMQEACKVLVGHHDFSSFRASG 227

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERSQ--LESTDGCLIHSEKSGHGSPPSSLDIT 534
           CQAKSPI+TL E+S++E   +L+FPS+ ER Q      + C    +        S+ ++ 
Sbjct: 228 CQAKSPIRTLAEISVSEVASTLYFPSITEREQNCENGENSCCKKFKTDLPMGSHSNTNVA 287

Query: 533 WVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERILNA 354
                  + GFG + RHRC+V+ ARARSFLYHQVRL+VGVLKSVG G+LT SDVERIL+A
Sbjct: 288 ESSFGETDLGFGIRRRHRCFVVTARARSFLYHQVRLLVGVLKSVGIGDLTTSDVERILSA 347

Query: 353 KTVTAASPMAPSCGLYLGNVKYDLP 279
           K+VTAASPMAP+ GLYLG+VKYDLP
Sbjct: 348 KSVTAASPMAPARGLYLGHVKYDLP 372


>ref|XP_004485453.1| PREDICTED: tRNA pseudouridine synthase A-like isoform X1 [Cicer
           arietinum]
          Length = 374

 Score =  256 bits (654), Expect = 8e-66
 Identities = 131/207 (63%), Positives = 161/207 (77%), Gaps = 4/207 (1%)
 Frame = -3

Query: 887 RFKALERTYYYRLFSGPEPLSTFEKDRAWHISEDLDILAMKKACTILVGSHDFSSFRASG 708
           R+KA ERTY+YRL SG EPLST EKDRAWH+ E+L++ AM++AC +LVG HDFSSFRA+G
Sbjct: 169 RYKAQERTYFYRLLSGSEPLSTLEKDRAWHVPEELNLPAMQEACRVLVGHHDFSSFRAAG 228

Query: 707 CQAKSPIKTLDELSITETFPSLHFPSLLERS-QLESTD---GCLIHSEKSGHGSPPSSLD 540
           CQAKSPI+TLDELS+ E   S +FPS+++R  Q++  D   GC  ++E     S  + +D
Sbjct: 229 CQAKSPIRTLDELSVVEVIQSPYFPSVMDRERQIKVADDLHGCGSNAEAVIPVSSSARID 288

Query: 539 ITWVGLQGCNQGFGQKPRHRCYVIAARARSFLYHQVRLMVGVLKSVGTGELTISDVERIL 360
                 +G   GFG++  HRC V+ ARAR+FLYHQVRL+VGVLK+VGTG LTI DVERIL
Sbjct: 289 KVRASNEGV--GFGKRRYHRCLVVTARARAFLYHQVRLLVGVLKAVGTGNLTIPDVERIL 346

Query: 359 NAKTVTAASPMAPSCGLYLGNVKYDLP 279
           NAKTVTAASPMAP+CGLYLG VKYDLP
Sbjct: 347 NAKTVTAASPMAPACGLYLGEVKYDLP 373