BLASTX nr result
ID: Zingiber24_contig00043750
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00043750
(248 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q08183.1|RBS3_MESCR RecName: Full=Ribulose bisphosphate carbo... 83 4e-14
gb|AAA33037.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s... 83 4e-14
gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase s... 82 6e-14
sp|Q08184.1|RBS4_MESCR RecName: Full=Ribulose bisphosphate carbo... 82 6e-14
sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carbo... 82 6e-14
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 81 1e-13
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 81 1e-13
sp|Q9XGX4.1|RBS3_AMAHP RecName: Full=Ribulose bisphosphate carbo... 81 2e-13
sp|Q9XGX5.1|RBS2_AMAHP RecName: Full=Ribulose bisphosphate carbo... 81 2e-13
sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carbo... 79 5e-13
dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 79 5e-13
ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase... 79 6e-13
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 78 1e-12
dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 78 1e-12
gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryan... 78 1e-12
sp|P18960.1|RBS_SILPR RecName: Full=Ribulose bisphosphate carbox... 77 2e-12
ref|XP_006391472.1| hypothetical protein EUTSA_v10019202mg [Eutr... 77 3e-12
gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK4565... 76 4e-12
gb|AFK33868.1| unknown [Lotus japonicus] 76 4e-12
gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides] 76 4e-12
>sp|Q08183.1|RBS3_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|436487|gb|AAA03695.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 183
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKSVSAFPVTRK+NDITSVASNGGRV CMQVWPP
Sbjct: 24 MVAPFNGLKSVSAFPVTRKNNDITSVASNGGRVQCMQVWPP 64
>gb|AAA33037.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum]
Length = 183
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKSVSAFPVTRK+NDITSVASNGGRV CMQVWPP
Sbjct: 24 MVAPFNGLKSVSAFPVTRKNNDITSVASNGGRVQCMQVWPP 64
>gb|AAA33036.1| ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum]
Length = 180
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKSVSAFPVT+KSNDITS+ASNGGRV CMQVWPP
Sbjct: 21 MVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPP 61
>sp|Q08184.1|RBS4_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
chloroplastic; Short=RuBisCO small subunit 4; Flags:
Precursor gi|167274|gb|AAA33038.1| ribulose
1,5-bisphosphate carboxylase/oxygenase small subunit
[Mesembryanthemum crystallinum] gi|436488|gb|AAA03696.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 183
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS+SAFPVTRK+NDITSVASNGGRV CMQVWPP
Sbjct: 24 MVAPFNGLKSISAFPVTRKNNDITSVASNGGRVQCMQVWPP 64
>sp|Q04450.1|RBS2_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|304444|gb|AAA03694.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
Length = 180
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKSVSAFPVT+KSNDITS+ASNGGRV CMQVWPP
Sbjct: 21 MVAPFTGLKSVSAFPVTKKSNDITSIASNGGRVQCMQVWPP 61
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SAFPVTRKSNDITS+ASNGGRV CMQVWPP
Sbjct: 26 MVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPP 66
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SAFPVTRKSNDITS+ASNGGRV CMQVWPP
Sbjct: 22 MVAPFTGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPP 62
>sp|Q9XGX4.1|RBS3_AMAHP RecName: Full=Ribulose bisphosphate carboxylase small chain 3,
chloroplastic; Short=RuBisCO small subunit 3; Flags:
Precursor gi|5002365|gb|AAD37440.1|AF150667_1 ribulose
1,5 bisphosphate carboxylase small subunit precursor
[Amaranthus hypochondriacus]
Length = 180
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS+++FPVTRKSNDITS+ASNGGRV CMQVWPP
Sbjct: 23 MVAPFNGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPP 63
>sp|Q9XGX5.1|RBS2_AMAHP RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
chloroplastic; Short=RuBisCO small subunit 2; Flags:
Precursor gi|5002363|gb|AAD37439.1|AF150666_1 ribulose
1,5 bisphosphate carboxylase small subunit precursor
[Amaranthus hypochondriacus]
Length = 184
Score = 80.9 bits (198), Expect = 2e-13
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS+++FPVTRKSNDITS+ASNGGRV CMQVWPP
Sbjct: 26 MVAPFNGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPP 66
>sp|P16032.2|RBS1_MESCR RecName: Full=Ribulose bisphosphate carboxylase small chain 1,
chloroplastic; Short=RuBisCO small subunit 1; Flags:
Precursor gi|304442|gb|AAA03693.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Mesembryanthemum crystallinum]
gi|228311|prf||1802403A RuBisCO:SUBUNIT=small
Length = 182
Score = 79.3 bits (194), Expect = 5e-13
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKSV+AFPVT+K+NDITSVA+NGGRV CMQVWPP
Sbjct: 23 MVAPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWPP 63
>dbj|BAI53118.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SAFPVTRKSNDITS+ SNGGRV CMQVWPP
Sbjct: 24 MVAPFTGLKSASAFPVTRKSNDITSLPSNGGRVQCMQVWPP 64
>ref|XP_004299075.1| PREDICTED: ribulose bisphosphate carboxylase small chain 1,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 180
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/41 (85%), Positives = 39/41 (95%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SAFPVTRK+NDIT++ASNGGRV CMQVWPP
Sbjct: 23 MVAPFNGLKSASAFPVTRKANDITTLASNGGRVQCMQVWPP 63
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SA PVTRKSNDITS+ASNGGRV CMQVWPP
Sbjct: 26 MVAPFTGLKSSSASPVTRKSNDITSIASNGGRVQCMQVWPP 66
>dbj|BAI53119.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 181
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/41 (87%), Positives = 38/41 (92%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SAFPVTRKS DITS+ASNGGRV CMQVWPP
Sbjct: 24 MVAPFTGLKSASAFPVTRKSADITSLASNGGRVQCMQVWPP 64
>gb|AAA33035.1| ribulose-1-5-bisphosphate carboxylase [Mesembryanthemum
crystallinum]
Length = 182
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/41 (82%), Positives = 39/41 (95%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSNDITSVASNGGRVNCMQVWPP 246
MV PF+GLKSV+AFPVT+K+NDITSVA+NGGRV CMQVWPP
Sbjct: 23 MVVPFNGLKSVAAFPVTKKNNDITSVATNGGRVQCMQVWPP 63
>sp|P18960.1|RBS_SILPR RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|169892|gb|AAB39037.1| ribulose bisphosphate
carboxylase precursor [Silene latifolia subsp. alba]
Length = 177
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/42 (88%), Positives = 40/42 (95%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSN-DITSVASNGGRVNCMQVWPP 246
MVAPFSGLKS SAFPV+RKSN DITS+A+NGGRVNCMQVWPP
Sbjct: 21 MVAPFSGLKSTSAFPVSRKSNVDITSLATNGGRVNCMQVWPP 62
>ref|XP_006391472.1| hypothetical protein EUTSA_v10019202mg [Eutrema salsugineum]
gi|557087906|gb|ESQ28758.1| hypothetical protein
EUTSA_v10019202mg [Eutrema salsugineum]
Length = 181
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/42 (85%), Positives = 40/42 (95%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSN-DITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS +AFPVTRK+N DITS+ASNGGRVNCMQVWPP
Sbjct: 20 MVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVNCMQVWPP 61
>gb|AFK36660.1| unknown [Lotus japonicus] gi|388515177|gb|AFK45650.1| unknown
[Lotus japonicus]
Length = 177
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/42 (83%), Positives = 40/42 (95%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSN-DITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS++ FPVTRK+N DITS+ASNGGRVNCMQVWPP
Sbjct: 19 MVAPFTGLKSMAGFPVTRKANNDITSIASNGGRVNCMQVWPP 60
>gb|AFK33868.1| unknown [Lotus japonicus]
Length = 177
Score = 76.3 bits (186), Expect = 4e-12
Identities = 35/42 (83%), Positives = 40/42 (95%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSN-DITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS++ FPVTRK+N DITS+ASNGGRVNCMQVWPP
Sbjct: 19 MVAPFTGLKSMAGFPVTRKANNDITSIASNGGRVNCMQVWPP 60
>gb|ABK96567.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 181
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/42 (85%), Positives = 39/42 (92%), Gaps = 1/42 (2%)
Frame = +1
Query: 124 MVAPFSGLKSVSAFPVTRKSN-DITSVASNGGRVNCMQVWPP 246
MVAPF+GLKS SAFPVTRK+N DITS+ASNGGRV CMQVWPP
Sbjct: 23 MVAPFNGLKSTSAFPVTRKANNDITSIASNGGRVQCMQVWPP 64