BLASTX nr result

ID: Zingiber24_contig00043714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043714
         (461 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY30719.1| Uncharacterized protein TCM_037833 [Theobroma cacao]    55   7e-06

>gb|EOY30719.1| Uncharacterized protein TCM_037833 [Theobroma cacao]
          Length = 239

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 45/168 (26%)
 Frame = -2

Query: 409 RQPQRGLGVAQLEKIRLQNKM------------------TDLRGQFAYPD--------XX 308
           +QPQRGLGVAQLEKIRL  +M                   D+R Q AYP           
Sbjct: 74  KQPQRGLGVAQLEKIRLHGQMGCSYHPSLHGPYPGNFNQEDMRVQTAYPSMPSSSFSYSS 133

Query: 307 XXXXXXSVFGAHPSFMIG---FEGSTEITYGE-HFSGAAKWS-----------LNDSNSH 173
                 + +G HPS M+G   ++    I YG+   S AA W+              + + 
Sbjct: 134 TSSTSSASYGFHPSMMMGLGEYDQRANIRYGDSQPSTAASWNPGSGILDTQHFAQPNMTR 193

Query: 172 PMLFINEQDNERNNMRQDQQLQLSIGSKGRDSDSA----LDLELKLSL 41
            +L ++ +D++    ++ +    S+GS  ++S+S+    LDLEL+LSL
Sbjct: 194 QLLNLHVEDSQPKKSKKHR--SNSLGSSSQNSESSDTQELDLELRLSL 239


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