BLASTX nr result

ID: Zingiber24_contig00043610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043610
         (338 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium di...    60   3e-07
ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group] g...    60   4e-07
gb|EAZ27746.1| hypothetical protein OsJ_11693 [Oryza sativa Japo...    60   4e-07
gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indi...    60   4e-07
sp|Q75I54.1|CCA31_ORYSJ RecName: Full=Cyclin-A3-1; AltName: Full...    60   4e-07
ref|XP_006651594.1| PREDICTED: cyclin-A3-1-like [Oryza brachyantha]    59   9e-07
ref|XP_002442399.1| hypothetical protein SORBIDRAFT_08g019410 [S...    59   9e-07
dbj|BAK05525.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   1e-06
ref|NP_001067137.1| Os12g0581800 [Oryza sativa Japonica Group] g...    56   4e-06
gb|EAY83668.1| hypothetical protein OsI_38893 [Oryza sativa Indi...    56   4e-06
ref|NP_001147065.1| cyclin-A2 [Zea mays] gi|195607004|gb|ACG2533...    55   1e-05

>ref|XP_003578446.1| PREDICTED: cyclin-A3-2-like [Brachypodium distachyon]
          Length = 381

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/32 (81%), Positives = 29/32 (90%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDE 241
           L AIRDKYKQHRFKCVSTL+PP EIPA+YF +
Sbjct: 348 LTAIRDKYKQHRFKCVSTLLPPVEIPASYFQD 379


>ref|NP_001050640.2| Os03g0607600 [Oryza sativa Japonica Group]
           gi|255674696|dbj|BAF12554.2| Os03g0607600 [Oryza sativa
           Japonica Group]
          Length = 395

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L+AIRDKYKQHRFK VSTL+PP EIPA+YF++ NE
Sbjct: 339 LMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 373


>gb|EAZ27746.1| hypothetical protein OsJ_11693 [Oryza sativa Japonica Group]
          Length = 392

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L+AIRDKYKQHRFK VSTL+PP EIPA+YF++ NE
Sbjct: 358 LMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 392


>gb|EAY90961.1| hypothetical protein OsI_12575 [Oryza sativa Indica Group]
          Length = 373

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L+AIRDKYKQHRFK VSTL+PP EIPA+YF++ NE
Sbjct: 339 LMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 373


>sp|Q75I54.1|CCA31_ORYSJ RecName: Full=Cyclin-A3-1; AltName: Full=G2/mitotic-specific
           cyclin-A3-1; Short=CycA3;1 gi|40538955|gb|AAR87212.1|
           putative A-type cyclin [Oryza sativa Japonica Group]
           gi|108709751|gb|ABF97546.1| G2/mitotic-specific cyclin
           C13-1, putative, expressed [Oryza sativa Japonica Group]
           gi|125544825|gb|EAY90964.1| hypothetical protein
           OsI_12578 [Oryza sativa Indica Group]
          Length = 373

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L+AIRDKYKQHRFK VSTL+PP EIPA+YF++ NE
Sbjct: 339 LMAIRDKYKQHRFKGVSTLLPPVEIPASYFEDLNE 373


>ref|XP_006651594.1| PREDICTED: cyclin-A3-1-like [Oryza brachyantha]
          Length = 342

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 27/35 (77%), Positives = 30/35 (85%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           LVAIRDKYKQHRFK VS L+PP EIPA+YF + NE
Sbjct: 308 LVAIRDKYKQHRFKGVSALLPPVEIPASYFQDRNE 342


>ref|XP_002442399.1| hypothetical protein SORBIDRAFT_08g019410 [Sorghum bicolor]
           gi|241943092|gb|EES16237.1| hypothetical protein
           SORBIDRAFT_08g019410 [Sorghum bicolor]
          Length = 428

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 25/35 (71%), Positives = 32/35 (91%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L+AIRDKYKQH+FKCVSTL+PP  IPA+YF++ +E
Sbjct: 394 LMAIRDKYKQHKFKCVSTLLPPVVIPASYFEDLDE 428


>dbj|BAK05525.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 376

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L AIRDKYKQHRFKCVS L+PP EIPA+YF +  E
Sbjct: 342 LPAIRDKYKQHRFKCVSMLLPPVEIPASYFQDLTE 376


>ref|NP_001067137.1| Os12g0581800 [Oryza sativa Japonica Group]
           gi|122248531|sp|Q2QN26.1|CCA32_ORYSJ RecName:
           Full=Cyclin-A3-2; AltName: Full=G2/mitotic-specific
           cyclin-A3-2; Short=CycA3;2 gi|77556341|gb|ABA99137.1|
           G2/mitotic-specific cyclin C13-1, putative, expressed
           [Oryza sativa Japonica Group]
           gi|113649644|dbj|BAF30156.1| Os12g0581800 [Oryza sativa
           Japonica Group] gi|125579867|gb|EAZ21013.1| hypothetical
           protein OsJ_36663 [Oryza sativa Japonica Group]
          Length = 385

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L AIRDKYKQH+FKCVSTL+PP +IPA+Y  +  E
Sbjct: 351 LTAIRDKYKQHKFKCVSTLLPPVDIPASYLQDLTE 385


>gb|EAY83668.1| hypothetical protein OsI_38893 [Oryza sativa Indica Group]
          Length = 385

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 24/35 (68%), Positives = 29/35 (82%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDEPNE 232
           L AIRDKYKQH+FKCVSTL+PP +IPA+Y  +  E
Sbjct: 351 LTAIRDKYKQHKFKCVSTLLPPVDIPASYLQDLTE 385


>ref|NP_001147065.1| cyclin-A2 [Zea mays] gi|195607004|gb|ACG25332.1| cyclin-A2 [Zea
           mays] gi|414868688|tpg|DAA47245.1| TPA: cyclin
           superfamily protein, putative [Zea mays]
          Length = 423

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 22/32 (68%), Positives = 28/32 (87%)
 Frame = -3

Query: 336 LVAIRDKYKQHRFKCVSTLVPPPEIPANYFDE 241
           L AIRDKYKQH+FKCVSTL+PP  +P +YF++
Sbjct: 389 LTAIRDKYKQHKFKCVSTLLPPVVVPTSYFED 420


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