BLASTX nr result

ID: Zingiber24_contig00043605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043605
         (464 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892846.1| hypothetical protein ARALYDRAFT_471694 [Arab...    52   1e-06
ref|XP_006416948.1| hypothetical protein EUTSA_v10009317mg [Eutr...    49   6e-06

>ref|XP_002892846.1| hypothetical protein ARALYDRAFT_471694 [Arabidopsis lyrata subsp.
           lyrata] gi|297338688|gb|EFH69105.1| hypothetical protein
           ARALYDRAFT_471694 [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 51.6 bits (122), Expect(2) = 1e-06
 Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = -3

Query: 351 VSSFPQFFQ*CKASFLCNDNVTEPLPVANA-SGGLSS*ELDKICHLHASDLTVDHEKKPI 175
           + S  Q F+      LC     +P   A+A S GLS  ++++I  +HA D+T+D EK  I
Sbjct: 56  IHSMLQSFEPIHGVLLCEGEDVDPSLYADAESSGLSPEDMEEIKKVHAGDMTIDREKDSI 115

Query: 174 *RCLAKLYLEHHIPFLCLYCGS 109
              LA+L LE +IPFL +  GS
Sbjct: 116 ELTLARLCLERNIPFLGICRGS 137



 Score = 26.6 bits (57), Expect(2) = 1e-06
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 104 VLNVADGGCLYQDAD 60
           +LNVA GG LYQD D
Sbjct: 139 ILNVAAGGTLYQDID 153


>ref|XP_006416948.1| hypothetical protein EUTSA_v10009317mg [Eutrema salsugineum]
           gi|557094719|gb|ESQ35301.1| hypothetical protein
           EUTSA_v10009317mg [Eutrema salsugineum]
          Length = 394

 Score = 48.5 bits (114), Expect(2) = 6e-06
 Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
 Frame = -3

Query: 351 VSSFPQFFQ*CKASFLCNDNVTEPLPVANAS-GGLSS*ELDKICHLHASDLTVDHEKKPI 175
           + S  Q F+      LC     +P   A+    GLS  ++D+I  LHA D T+D EK  I
Sbjct: 56  IHSLLQSFEPIHGVLLCEGEDVDPSLYADVELPGLSPEDMDEIRRLHAGDTTIDREKDSI 115

Query: 174 *RCLAKLYLEHHIPFLCLYCGS 109
              LA+L LE +IP+L +  GS
Sbjct: 116 ELTLARLCLERNIPYLGICRGS 137



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -1

Query: 104 VLNVADGGCLYQDAD 60
           +LNVA GG LYQD D
Sbjct: 139 ILNVAAGGTLYQDVD 153


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