BLASTX nr result

ID: Zingiber24_contig00043386 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043386
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ92510.1| predicted protein [Hordeum vulgare subsp. vulgar...    65   1e-08
ref|XP_004972467.1| PREDICTED: probable VAMP-like protein At1g33...    64   2e-08
ref|NP_001144749.1| uncharacterized protein LOC100277798 [Zea ma...    64   2e-08
ref|XP_003573285.1| PREDICTED: probable VAMP-like protein At1g33...    64   2e-08
gb|EEC82794.1| hypothetical protein OsI_27556 [Oryza sativa Indi...    64   3e-08
ref|NP_001060818.1| Os08g0110300 [Oryza sativa Japonica Group] g...    63   5e-08
ref|XP_002444899.1| hypothetical protein SORBIDRAFT_07g001080 [S...    62   6e-08
ref|NP_001131754.1| hypothetical protein [Zea mays] gi|194692436...    62   8e-08
ref|XP_004972269.1| PREDICTED: probable VAMP-like protein At1g33...    62   1e-07
gb|AFW84414.1| hypothetical protein ZEAMMB73_668553 [Zea mays]         61   2e-07
ref|XP_006659046.1| PREDICTED: probable VAMP-like protein At1g33...    60   4e-07
ref|XP_001753533.1| VAMP-like protein [Physcomitrella patens] gi...    59   7e-07
ref|XP_004138657.1| PREDICTED: probable VAMP-like protein At1g33...    57   2e-06
ref|XP_001784046.1| VAMP-like protein [Physcomitrella patens] gi...    57   3e-06
gb|EMT32382.1| hypothetical protein F775_18627 [Aegilops tauschii]     56   6e-06
ref|XP_002456728.1| hypothetical protein SORBIDRAFT_03g041520 [S...    56   6e-06
ref|XP_001774973.1| VAMP-like protein [Physcomitrella patens] gi...    55   7e-06

>dbj|BAJ92510.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326521608|dbj|BAK00380.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326528015|dbj|BAJ89059.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 277

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 184 MPMEQANLMSS-SREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           M +E++   S   R+     LW RHVK+I+ +D++ CLVLF+ WLAVC GFQCVS
Sbjct: 222 MSLERSTSQSRLRRQQSSRSLWMRHVKIIIIIDVVICLVLFAAWLAVCKGFQCVS 276


>ref|XP_004972467.1| PREDICTED: probable VAMP-like protein At1g33475-like [Setaria
           italica]
          Length = 280

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 49/148 (33%)
 Frame = -2

Query: 319 HDELVSVIKHLVSSLEYTAPHSS-------------EGNYASPSTNQPLLKDGM------ 197
           HD LV  ++ LV+SLE   PH++             EG+  + S    L K G       
Sbjct: 133 HDSLVPAVQRLVASLE-KMPHAALVLEESAERGGTNEGSGCTSSKVPLLGKSGSRKEKKK 191

Query: 196 ---------------------LMIDMPMEQANLMSSSREMIGYKL---------WWRHVK 107
                                + ID+P E+   MS  R +   +L         W RHVK
Sbjct: 192 KSKDKLASTGDGEDERHGTRGVRIDVPAEEVGGMSLERSLSQSRLRRQQPSRSLWMRHVK 251

Query: 106 LIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           +I+ VD + CL+LF+ WLAVC GF+CVS
Sbjct: 252 IIIVVDAVICLLLFAAWLAVCKGFRCVS 279


>ref|NP_001144749.1| uncharacterized protein LOC100277798 [Zea mays]
           gi|195646508|gb|ACG42722.1| hypothetical protein [Zea
           mays]
          Length = 293

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -2

Query: 184 MPMEQANLMSS-SREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           M +E++   S   R+     LW RHVK+IV+VD + CLVLF+ WLAVC GFQCVS
Sbjct: 238 MSLERSGSQSRLRRQQSSRSLWMRHVKVIVAVDAVVCLVLFAAWLAVCKGFQCVS 292


>ref|XP_003573285.1| PREDICTED: probable VAMP-like protein At1g33475-like [Brachypodium
           distachyon]
          Length = 279

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/148 (32%), Positives = 64/148 (43%), Gaps = 48/148 (32%)
 Frame = -2

Query: 322 LHDELVSVIKHLVSSLEY---TAPHSSEGNY--------ASPSTNQPLLKDGM------- 197
           LHD LV  ++ LV+SLE     A    +GN         +  S+  PLL  G        
Sbjct: 131 LHDALVPAVQRLVASLEKMPRVAIVLEDGNRRGGSNESSSCTSSKVPLLGKGGGRKDKKK 190

Query: 196 ---------------------LMIDMPMEQANLMSSSR---------EMIGYKLWWRHVK 107
                                + ID+P E  + MS  R         +     LW RHVK
Sbjct: 191 GKEKGASMGDDDEDEHHGTRGVRIDVPPEDVSGMSLERSTSQSRLRRQQSSRSLWMRHVK 250

Query: 106 LIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           +I+ VD + C++LF+ WLAVC GFQCVS
Sbjct: 251 IIIIVDAVICVILFAAWLAVCKGFQCVS 278


>gb|EEC82794.1| hypothetical protein OsI_27556 [Oryza sativa Indica Group]
          Length = 277

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 9/65 (13%)
 Frame = -2

Query: 190 IDMPMEQANLMSSSR---------EMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNG 38
           ID+P EQ   MS  R         +     LW RHVK+I+ VD I C++LF+ WLAVC G
Sbjct: 212 IDVPPEQVGGMSLERSASQSRLRRQHSSRSLWVRHVKIIIVVDAIICILLFAAWLAVCKG 271

Query: 37  FQCVS 23
           FQCVS
Sbjct: 272 FQCVS 276


>ref|NP_001060818.1| Os08g0110300 [Oryza sativa Japonica Group]
           gi|42408385|dbj|BAD09536.1| zinc finger (C3HC4-type RING
           finger) protein family -like [Oryza sativa Japonica
           Group] gi|113622787|dbj|BAF22732.1| Os08g0110300 [Oryza
           sativa Japonica Group] gi|215695194|dbj|BAG90385.1|
           unnamed protein product [Oryza sativa Japonica Group]
           gi|222639786|gb|EEE67918.1| hypothetical protein
           OsJ_25783 [Oryza sativa Japonica Group]
          Length = 277

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 48/147 (32%), Positives = 65/147 (44%), Gaps = 48/147 (32%)
 Frame = -2

Query: 319 HDELVSVIKHLVSSLEYTAPHSS------------EGNYASPSTNQPLL------KDGM- 197
           HD LV  ++ LV+SLE   PH++              + +  S+  PLL      KD   
Sbjct: 131 HDSLVPAVQRLVASLE-KMPHATFDLEESVEKGEPSDSSSCTSSKVPLLGRSGSRKDKKK 189

Query: 196 --------------------LMIDMPMEQANLMSSSR---------EMIGYKLWWRHVKL 104
                               + ID+P E+   MS  R         +     LW RHVK+
Sbjct: 190 AKEKAASAAVCEDEQHGTRGVRIDVPPEEVGGMSLERSASQSRLRRQHSSRSLWVRHVKI 249

Query: 103 IVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           I+ VD I C++LF+ WLAVC GFQCVS
Sbjct: 250 IIVVDAIICILLFAAWLAVCKGFQCVS 276


>ref|XP_002444899.1| hypothetical protein SORBIDRAFT_07g001080 [Sorghum bicolor]
           gi|241941249|gb|EES14394.1| hypothetical protein
           SORBIDRAFT_07g001080 [Sorghum bicolor]
          Length = 294

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -2

Query: 202 GMLMIDMPMEQANLMSSSREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           G + ++  + Q+ L    ++     LW RHVK+I+ VD + CLVLF+ WLAVC GFQCVS
Sbjct: 235 GGMSLERSLSQSRLRRQQQQP-SRSLWMRHVKVIIIVDAVVCLVLFAAWLAVCKGFQCVS 293


>ref|NP_001131754.1| hypothetical protein [Zea mays] gi|194692436|gb|ACF80302.1| unknown
           [Zea mays] gi|413941624|gb|AFW74273.1| hypothetical
           protein ZEAMMB73_171498 [Zea mays]
          Length = 291

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -2

Query: 184 MPMEQANLMSS-SREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           M +E++   S   R+     LW RHVK+IV+VD + CLVL + WLAVC GFQCVS
Sbjct: 236 MSLERSGSQSRLRRQQSSRSLWMRHVKVIVAVDAVVCLVLLAAWLAVCKGFQCVS 290


>ref|XP_004972269.1| PREDICTED: probable VAMP-like protein At1g33475-like [Setaria
           italica]
          Length = 245

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 19/39 (48%), Positives = 32/39 (82%)
 Frame = -2

Query: 136 GYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVSK 20
           G++ WWRH  +++ VD++ CLVLF+VW+ VC GF+C+++
Sbjct: 207 GWRSWWRHAVVVIGVDVVLCLVLFAVWMGVCKGFRCLTR 245


>gb|AFW84414.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
          Length = 239

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 20/45 (44%), Positives = 34/45 (75%)
 Frame = -2

Query: 154 SSREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVSK 20
           S+  + G++ WWRH  +++ VD++ CLVLF+VW+ VC GF C+++
Sbjct: 195 SASALPGWRPWWRHASVVIVVDVVLCLVLFAVWMGVCKGFGCLTR 239


>ref|XP_006659046.1| PREDICTED: probable VAMP-like protein At1g33475-like [Oryza
           brachyantha]
          Length = 277

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 46/147 (31%), Positives = 65/147 (44%), Gaps = 48/147 (32%)
 Frame = -2

Query: 319 HDELVSVIKHLVSSLEYTAPHSS------------EGNYASPSTNQPLL------KDGM- 197
           HD LV  ++ LV+SLE   PH++              + +  S+  PLL      KD   
Sbjct: 131 HDSLVPAVQRLVASLE-KMPHAAFVLEESVEKGDPSDSSSCTSSKVPLLGRSGSRKDKKK 189

Query: 196 --------------------LMIDMPMEQANLMSSSR---------EMIGYKLWWRHVKL 104
                               + ID+P ++   MS  R         +     LW RHVK+
Sbjct: 190 AKEKAASAAVCDDEQHGTRGVRIDVPPDEVGGMSLERSPSQSRLRRQHSSRSLWVRHVKI 249

Query: 103 IVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           I+ VD I C++LF+ WLAVC GF+CVS
Sbjct: 250 IIVVDAIICVLLFAAWLAVCKGFRCVS 276


>ref|XP_001753533.1| VAMP-like protein [Physcomitrella patens]
           gi|162695412|gb|EDQ81756.1| VAMP-like protein
           [Physcomitrella patens]
          Length = 243

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 23/53 (43%), Positives = 37/53 (69%)
 Frame = -2

Query: 178 MEQANLMSSSREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVSK 20
           M+  N    +RE+   K+WWR+VK ++ +D+I C VLF++WL +C GF+CV +
Sbjct: 192 MDLNNKKLRARELAS-KMWWRNVKFVLVLDLIVCCVLFAIWLGICRGFKCVHR 243


>ref|XP_004138657.1| PREDICTED: probable VAMP-like protein At1g33475-like [Cucumis
           sativus] gi|449525079|ref|XP_004169547.1| PREDICTED:
           probable VAMP-like protein At1g33475-like [Cucumis
           sativus]
          Length = 276

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/52 (44%), Positives = 33/52 (63%)
 Frame = -2

Query: 181 PMEQANLMSSSREMIGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCV 26
           P+ ++N  S  R       WWRHV++ ++VD + CL+LF +WL VCNG  CV
Sbjct: 230 PLRRSNSQSIRRR------WWRHVRIALAVDAVVCLILFVIWLIVCNGVSCV 275


>ref|XP_001784046.1| VAMP-like protein [Physcomitrella patens]
           gi|162664432|gb|EDQ51152.1| VAMP-like protein
           [Physcomitrella patens]
          Length = 265

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 18/38 (47%), Positives = 30/38 (78%)
 Frame = -2

Query: 139 IGYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCV 26
           I  ++WW++VKL++ +D++ C VLF++WL +C GF CV
Sbjct: 227 IASQMWWKNVKLVLILDLVVCFVLFAIWLGICGGFSCV 264


>gb|EMT32382.1| hypothetical protein F775_18627 [Aegilops tauschii]
          Length = 222

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = -2

Query: 130 KLWWR-HVKLIVSVDIIFCLVLFSVWLAVCNGFQCVSK 20
           + WWR H   ++ VD++ CLVLF VW+AVC+GF CV +
Sbjct: 185 RTWWRRHAMAVIGVDVVLCLVLFGVWMAVCHGFSCVQR 222


>ref|XP_002456728.1| hypothetical protein SORBIDRAFT_03g041520 [Sorghum bicolor]
           gi|241928703|gb|EES01848.1| hypothetical protein
           SORBIDRAFT_03g041520 [Sorghum bicolor]
          Length = 442

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 18/39 (46%), Positives = 31/39 (79%)
 Frame = -2

Query: 136 GYKLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVSK 20
           G++ W RH  +++ VD++ CLVLF+VW+ VC GF+C+++
Sbjct: 404 GWRSWSRHATVVIVVDVVLCLVLFAVWMGVCKGFRCLTR 442


>ref|XP_001774973.1| VAMP-like protein [Physcomitrella patens]
           gi|162673720|gb|EDQ60239.1| VAMP-like protein
           [Physcomitrella patens]
          Length = 217

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 17/36 (47%), Positives = 30/36 (83%)
 Frame = -2

Query: 130 KLWWRHVKLIVSVDIIFCLVLFSVWLAVCNGFQCVS 23
           ++WW++VKL+  +D++ C VLF++WL +C GF+CV+
Sbjct: 182 QMWWKNVKLVFILDLVVCCVLFAIWLGICGGFRCVN 217


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