BLASTX nr result

ID: Zingiber24_contig00043359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043359
         (273 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGI62058.1| SQUAMOSA promoter-binding-like 10 [Erycina pusilla]     59   7e-07
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...    58   1e-06
dbj|BAJ92814.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06
dbj|BAJ85003.1| predicted protein [Hordeum vulgare subsp. vulgare]     57   3e-06

>gb|AGI62058.1| SQUAMOSA promoter-binding-like 10 [Erycina pusilla]
          Length = 481

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 14/105 (13%)
 Frame = +1

Query: 1   DHNARRRKPRPNIISFSST--HSSFYA------------AFDHGRTTLGATIEEHHNFKF 138
           +HN+RRRKP+P  ISF+S+   SSFY                 GR++      +   F  
Sbjct: 241 EHNSRRRKPQPEAISFNSSVLPSSFYGNGQQMNFFLSRGPVSDGRSSASTMWGKSTGFSL 300

Query: 139 TQMREQWIKPIKEVNIDGQLHLPNTQFLNAFPSLYHEGDKLLPLQ 273
           +     W KP K   +DG LHLP T F +AFP+  H  ++ +P +
Sbjct: 301 STTDGSWPKPTK-TGVDGALHLPFTDFSDAFPASNHGFNRTMPFK 344


>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223545956|gb|EEF47459.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 483

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 39/103 (37%), Positives = 46/103 (44%), Gaps = 14/103 (13%)
 Frame = +1

Query: 1   DHNARRRKPRPNIISFSSTH--SSFY------------AAFDHGRTTLGATIEEHHNFKF 138
           DHNARRRKP+P  I  +S    SS Y            A   H R       E   + KF
Sbjct: 254 DHNARRRKPQPESIQMNSARLSSSSYDERPHMSLVWNRAPLVHARANANLAWEGTSSSKF 313

Query: 139 TQMREQWIKPIKEVNIDGQLHLPNTQFLNAFPSLYHEGDKLLP 267
           T  +E  +KP K   IDGQLHLP  +   + P   H    LLP
Sbjct: 314 TITKEYVLKPAKIGGIDGQLHLPANELTTSIPLHPHNCKSLLP 356


>dbj|BAJ92814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 354

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
 Frame = +1

Query: 1   DHNARRRKPRPNIISFSSTHSSFYAAFD---------------HGRTTLGATIEEHHNFK 135
           DHNARRRKP+P+  SF+         FD               HGR    +  +   +FK
Sbjct: 124 DHNARRRKPQPDAFSFAPARLPSSLMFDDRRQISFVWDKDPLGHGRPFPCSPWDSPSDFK 183

Query: 136 FTQMREQWIKPIKEVNIDGQLHLPNTQFLNAFPSLYHEGDKLLPLQ 273
             Q++E     I+EV+I+GQ+H   +   NA P+L H+  +LLP++
Sbjct: 184 PPQVKE-----IREVSINGQVHFDKSHLPNAVPALSHDIAELLPMK 224


>dbj|BAJ85003.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 224

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 15/106 (14%)
 Frame = +1

Query: 1   DHNARRRKPRPNIISFSSTHSSFYAAFD---------------HGRTTLGATIEEHHNFK 135
           DHNARRRKP+P+  SF+         FD               HGR    +  +   +FK
Sbjct: 22  DHNARRRKPQPDAFSFAPARLPSSLMFDDRRQISFVWDKDPLSHGRPFPCSPWDSPSDFK 81

Query: 136 FTQMREQWIKPIKEVNIDGQLHLPNTQFLNAFPSLYHEGDKLLPLQ 273
             Q++E     I+EV+I+GQ+H   +   NA P+L H+  +LLP++
Sbjct: 82  PPQVKE-----IREVSINGQVHFDKSHLPNAVPALSHDIAELLPMK 122


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