BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043352
         (294 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282154.2| PREDICTED: pentatricopeptide repeat-containi...    85   9e-15
ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containi...    85   1e-14
ref|XP_004505962.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
emb|CBI16275.3| unnamed protein product [Vitis vinifera]               84   2e-14
gb|EXB29453.1| hypothetical protein L484_022124 [Morus notabilis]      83   4e-14
ref|XP_006593024.1| PREDICTED: pentatricopeptide repeat-containi...    82   1e-13
ref|XP_006424630.1| hypothetical protein CICLE_v10028524mg [Citr...    82   1e-13
ref|XP_006338053.1| PREDICTED: pentatricopeptide repeat-containi...    79   5e-13
ref|XP_003606459.1| Pentatricopeptide repeat-containing protein ...    79   5e-13
ref|XP_002324476.2| hypothetical protein POPTR_0018s10150g [Popu...    79   8e-13
gb|EMJ07699.1| hypothetical protein PRUPE_ppa019170mg [Prunus pe...    79   8e-13
ref|XP_004237999.1| PREDICTED: pentatricopeptide repeat-containi...    79   8e-13
gb|EOY33083.1| Tetratricopeptide repeat-like superfamily protein...    76   4e-12
gb|ESW04178.1| hypothetical protein PHAVU_011G073100g [Phaseolus...    75   7e-12
ref|XP_002526356.1| pentatricopeptide repeat-containing protein,...    75   1e-11
ref|XP_006409790.1| hypothetical protein EUTSA_v10016739mg [Eutr...    73   5e-11
ref|XP_004969938.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_004309881.1| PREDICTED: pentatricopeptide repeat-containi...    72   8e-11
ref|XP_002458480.1| hypothetical protein SORBIDRAFT_03g034460 [S...    72   1e-10

>ref|XP_002282154.2| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Vitis vinifera]
          Length = 356

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/94 (41%), Positives = 64/94 (68%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+GKG  PS+++ NS++ A A+ GEV  AV  +WE    +R+ D IT +T+L+++CR+ 
Sbjct: 252 EMKGKGFVPSSKSYNSLVNALALCGEVDEAVNYLWEMTEKQRSADFITYQTVLDQICRQG 311

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEF 284
              DA++LLKE++ + L+D   +  LL  +E+EF
Sbjct: 312 RTQDAMSLLKELQVKDLLDGHTYQKLLSLLEQEF 345


>ref|XP_004167072.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/96 (42%), Positives = 64/96 (66%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+ + NSI+ A A+ GEV  AV  +WE    RR+PD IT +T+L+E+CR+ 
Sbjct: 331 EMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQG 390

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMN 290
            V +A +LL+E++ + LVD   +  LL  +E+++ N
Sbjct: 391 KVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 426


>ref|XP_004147297.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cucumis sativus]
          Length = 428

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 41/96 (42%), Positives = 64/96 (66%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+ + NSI+ A A+ GEV  AV  +WE    RR+PD IT +T+L+E+CR+ 
Sbjct: 331 EMKEKGFVPSSISYNSIVNALALNGEVEDAVNYLWEMIDNRRSPDFITYKTVLDELCRQG 390

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMN 290
            V +A +LL+E++ + LVD   +  LL  +E+++ N
Sbjct: 391 KVVEATSLLRELQEKDLVDGHTYRKLLYVLEDDYGN 426


>ref|XP_004505962.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Cicer arietinum]
          Length = 499

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/97 (39%), Positives = 67/97 (69%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  P++++ NS++ + A+ GEV +AV+ +WE    +++ D IT RT+L+E+CRR 
Sbjct: 386 EMKTKGFTPNSKSYNSLVNSLALGGEVEAAVDYLWEMTRKQKSVDFITYRTVLDEICRRG 445

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
            V DA++ L+E++ + LVD   +  LL  +E+++ NS
Sbjct: 446 RVEDAMSFLQELQEKDLVDGHTYRKLLYVLEDDYGNS 482


>emb|CBI16275.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 39/96 (40%), Positives = 64/96 (66%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+GKG  PS+++ NS++ A A+ GEV  AV  +WE    +R+ D IT +T+L+++CR+ 
Sbjct: 260 EMKGKGFVPSSKSYNSLVNALALCGEVDEAVNYLWEMTEKQRSADFITYQTVLDQICRQG 319

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMN 290
              DA++LLKE++ + L+D   +  LL  +E+E  N
Sbjct: 320 RTQDAMSLLKELQVKDLLDGHTYQKLLSLLEQEAKN 355


>gb|EXB29453.1| hypothetical protein L484_022124 [Morus notabilis]
          Length = 552

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 40/97 (41%), Positives = 64/97 (65%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+++ NS++ A A++GE+  AV+ +WE    RR+ D IT RT+L+E+CRR 
Sbjct: 382 EMKTKGFVPSSKSYNSLVNALALSGEIDEAVKYLWEMIEQRRSADFITYRTILDEVCRRG 441

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
            V +A+ LLKE   + L+D   +  LL  +E++  +S
Sbjct: 442 RVEEAMKLLKEFREKDLLDGHTYKKLLYVLEDDIGHS 478


>ref|XP_006593024.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like, partial [Glycine max]
          Length = 574

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 37/97 (38%), Positives = 63/97 (64%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+++ NS++ + A+ GE+  AV  +WE    +R+ D IT +T+L+E+CRR 
Sbjct: 411 EMKTKGFVPSSKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYKTVLDEICRRG 470

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
           TV +    L+E++ + LVD   +  LL  +E+++ NS
Sbjct: 471 TVQEGTRFLQELQEKDLVDGHAYRKLLYVLEDDYGNS 507


>ref|XP_006424630.1| hypothetical protein CICLE_v10028524mg [Citrus clementina]
           gi|568869886|ref|XP_006488146.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Citrus sinensis]
           gi|557526564|gb|ESR37870.1| hypothetical protein
           CICLE_v10028524mg [Citrus clementina]
          Length = 417

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 40/97 (41%), Positives = 63/97 (64%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+++ NS++ A A+ GEV   V+ +WE    +R  D IT RT+L+E+CRR 
Sbjct: 315 EMKRKGFVPSSKSYNSLVSALALNGEVEETVKNLWEMIEKQRPVDFITYRTVLDEICRRG 374

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
              +A+ LLKE++ + L+D   +  LL  +E++F NS
Sbjct: 375 RAGEAMKLLKELQNKNLIDGYTYTKLLDVLEDDFGNS 411


>ref|XP_006338053.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565341791|ref|XP_006338054.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 451

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/96 (39%), Positives = 65/96 (67%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           +M+ K + PS ++ NS++ + ++ GEV  AV+ +WE    RRT D IT RT+++E+CR+ 
Sbjct: 350 KMKCKRLIPSTKSYNSLVNSLSLGGEVDEAVKFLWEMNENRRTIDFITFRTVIDEVCRQK 409

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMN 290
           ++ DA+ LLKE++ + LVD+  H  LL  +E++  N
Sbjct: 410 SMQDAIDLLKELQDKGLVDSVTHSKLLCELEDDIDN 445


>ref|XP_003606459.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355507514|gb|AES88656.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 418

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/97 (37%), Positives = 64/97 (65%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+++ NS++ + A+ G+V  AV  +WE    +++ D IT RT+L+E+CRR 
Sbjct: 309 EMKAKGFVPSSKSYNSLVNSLALVGDVEEAVNYLWEMTEKQKSVDFITYRTVLDEICRRG 368

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
            V +A+  L+E++ + LVD   +  LL  +E+++ +S
Sbjct: 369 RVQEAMRFLQELQEKDLVDGHTYRKLLYVLEDDYGDS 405


>ref|XP_002324476.2| hypothetical protein POPTR_0018s10150g [Populus trichocarpa]
           gi|550318443|gb|EEF03041.2| hypothetical protein
           POPTR_0018s10150g [Populus trichocarpa]
          Length = 400

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 40/97 (41%), Positives = 63/97 (64%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG   S ++ NS++ A A+ GEV  AV  +WE     R+ DLIT +T+L+E+CR+ 
Sbjct: 296 EMKEKGFVLSNKSFNSLVNALALGGEVGEAVNYLWEMIDKHRSVDLITYKTVLDEICRQG 355

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
            + +A +LLKE + + LVD   + +LL  +E++F NS
Sbjct: 356 RIGEATSLLKEWQEKDLVDGITYRELLHVLEDDFGNS 392


>gb|EMJ07699.1| hypothetical protein PRUPE_ppa019170mg [Prunus persica]
          Length = 369

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 37/97 (38%), Positives = 65/97 (67%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  PS+++ NS++ A A+ GEV  AV+ +WE    +R+ + IT RT+L+E+CR+ 
Sbjct: 266 EMKSKGFIPSSKSYNSLVNALALNGEVEEAVKYLWEMIEKQRSAEFITYRTVLDEICRQG 325

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
            V +A+ LLKE + + L++   +  LL  +E+++ +S
Sbjct: 326 RVGEAMRLLKEFQEKDLLNGHTYRKLLYVLEDDYGDS 362


>ref|XP_004237999.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like isoform 1 [Solanum lycopersicum]
           gi|460384604|ref|XP_004238000.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like isoform 2 [Solanum lycopersicum]
          Length = 451

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 38/96 (39%), Positives = 64/96 (66%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           +M+ K + PS ++ NS++ + ++ GEV  AV+ +WE    RRT D IT RT+++E+CR+ 
Sbjct: 350 KMKCKRLIPSTKSYNSLVNSLSLGGEVDEAVKFLWEMNENRRTIDFITFRTVIDEVCRQK 409

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMN 290
           ++ DA+ LLKE++ + LVD+  H  LL   E++  N
Sbjct: 410 SMQDAIDLLKELQDKGLVDSLTHSKLLREFEDDIDN 445


>gb|EOY33083.1| Tetratricopeptide repeat-like superfamily protein, putative
           [Theobroma cacao]
          Length = 429

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 38/96 (39%), Positives = 61/96 (63%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+  G  PS+++ NS++ A A++GEV  A+  + E    R++ D IT RT+L+E+CRR 
Sbjct: 334 EMKKNGFVPSSKSYNSLVNALALSGEVEEALHYLREMIEKRKSADFITYRTILDEICRRG 393

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMN 290
              +A  LLKE++ + LVD   +  LL  +E++F N
Sbjct: 394 RAEEATGLLKELQDKDLVDGHTYRKLLYAMEDDFGN 429


>gb|ESW04178.1| hypothetical protein PHAVU_011G073100g [Phaseolus vulgaris]
          Length = 439

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/97 (35%), Positives = 62/97 (63%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG  P +++ NS++ + A+ GE+  AV  +WE    +R+ D IT RT+L+E+CRR 
Sbjct: 335 EMKTKGYVPGSKSYNSLVNSLALGGEIEEAVNYLWEMTDKQRSADFITYRTVLDEICRRG 394

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
           T+ +  + L+ ++ + LVD   +  LL  +E+++ +S
Sbjct: 395 TIQEGKSFLQLLQEKDLVDGHAYRKLLYVLEDDYGDS 431


>ref|XP_002526356.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534315|gb|EEF36027.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 415

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           +M  KG   S+R+ NS++ A A+ GE+  AV   WE    +++PD IT RT+L+E CRR 
Sbjct: 302 DMEKKGFVLSSRSYNSLVNALALNGEIEEAVNYFWEMTRKQKSPDFITYRTILDETCRRG 361

Query: 183 T---VADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
           +     +A+ LLKE E + LVD   +  LL  +E++F +S
Sbjct: 362 SGGEAGEAMRLLKEWEQKGLVDGHTYKKLLDVLEDDFGSS 401


>ref|XP_006409790.1| hypothetical protein EUTSA_v10016739mg [Eutrema salsugineum]
           gi|557110959|gb|ESQ51243.1| hypothetical protein
           EUTSA_v10016739mg [Eutrema salsugineum]
          Length = 407

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 34/79 (43%), Positives = 51/79 (64%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+GKG  P+ ++ NS++ A A+ GE+ +AV  +WE     R  D ITCRTL++E CR+ 
Sbjct: 314 EMKGKGFVPNGKSYNSLVNAFALNGEIDNAVSCLWEMVEIGRVVDFITCRTLVDESCRKG 373

Query: 183 TVADAVTLLKEMEAEKLVD 239
            + +A  LL+ M   K+VD
Sbjct: 374 KLNEAKRLLEMMRERKVVD 392


>ref|XP_004969938.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Setaria italica]
          Length = 439

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 41/93 (44%), Positives = 55/93 (59%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EMRGK + P+  ACN+ + A AM+GE   A  +MWE A A R  D IT R L+EE+ R  
Sbjct: 331 EMRGKALLPTEPACNAFVSALAMSGEAEDAELVMWEMARAGRVVDDITRRALVEELWRAG 390

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEE 281
              DA  L +EME   +V+AR    LL +I ++
Sbjct: 391 KREDADRLAREMEERGIVNARELRALLSFIRDD 423


>ref|XP_004309881.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27800,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 441

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/97 (35%), Positives = 61/97 (62%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EM+ KG   S+++ NS++ A A++GE+  AV+ +WE    RR+ + IT +T+L+E CR+ 
Sbjct: 338 EMKTKGFILSSKSYNSLVNALALSGEIEEAVKYLWEMVEKRRSTEFITYKTVLDEFCRQG 397

Query: 183 TVADAVTLLKEMEAEKLVDARMHGDLLLWIEEEFMNS 293
            V  A+ LLKE + + +V    +  L   +E+++ +S
Sbjct: 398 LVGQAMKLLKEFQEKDIVSGHAYRKLRYVLEDDYGDS 434


>ref|XP_002458480.1| hypothetical protein SORBIDRAFT_03g034460 [Sorghum bicolor]
           gi|241930455|gb|EES03600.1| hypothetical protein
           SORBIDRAFT_03g034460 [Sorghum bicolor]
          Length = 387

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 39/81 (48%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   EMRGKGMAPSARACNSIICATAMAGEVRSAVELMWEAALARRTPDLITCRTLLEEMCRRW 182
           EMRG G+ P+  ACN+ + A AMAGE R A  +MWE A A R  D IT R L+EE+ R  
Sbjct: 280 EMRGNGLLPTEPACNAFVGALAMAGEARDAERVMWEMARAGRVVDDITRRALVEELSRVG 339

Query: 183 TVADAVTLLKEMEAEKLVDAR 245
              +A  L +EME + +V AR
Sbjct: 340 KREEADRLAREMEQKGIVSAR 360