BLASTX nr result

ID: Zingiber24_contig00043267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043267
         (300 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegi...    67   2e-09
ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049...    63   5e-08
ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [A...    62   6e-08
gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus...    59   5e-07
gb|EMJ11418.1| hypothetical protein PRUPE_ppa015814mg [Prunus pe...    58   1e-06
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutr...    57   3e-06
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab...    56   6e-06
gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [The...    55   1e-05

>gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
          Length = 706

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -1

Query: 300 EKLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPV 169
           EKLSRSGRFE A  LW++AT+  ++L CS DLLDP KTEVF+PV
Sbjct: 420 EKLSRSGRFEVAKELWDDATKNGIVLGCSSDLLDPLKTEVFRPV 463


>ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049|gb|ACN25608.1| unknown
           [Zea mays] gi|223944973|gb|ACN26570.1| unknown [Zea
           mays] gi|414871380|tpg|DAA49937.1| TPA: hypothetical
           protein ZEAMMB73_156182 [Zea mays]
           gi|414871381|tpg|DAA49938.1| TPA: hypothetical protein
           ZEAMMB73_156182 [Zea mays]
          Length = 499

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/50 (56%), Positives = 36/50 (72%)
 Frame = -1

Query: 300 EKLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEKKL 151
           EKL R GRFE    LW+EAT   ++L CS+DLLDP KTEVF+P+   ++L
Sbjct: 416 EKLCRIGRFEIGRELWDEATNSGLVLGCSQDLLDPLKTEVFRPICPAQRL 465


>ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [Amborella trichopoda]
           gi|548852840|gb|ERN10900.1| hypothetical protein
           AMTR_s00164p00020970 [Amborella trichopoda]
          Length = 459

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/47 (59%), Positives = 34/47 (72%)
 Frame = -1

Query: 297 KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEK 157
           KL + G+FE    LW+EA ER  +LQCS DLLDPSKTEV+KP   E+
Sbjct: 385 KLCKGGKFEIGRKLWDEALERGAVLQCSVDLLDPSKTEVYKPKRKER 431


>gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus vulgaris]
          Length = 494

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 26/47 (55%), Positives = 32/47 (68%)
 Frame = -1

Query: 297 KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEK 157
           KL   G FE+   LW+EAT   +ILQCS D+LDPS T+V+KP   EK
Sbjct: 408 KLCTGGNFEKGRELWDEATSMGIILQCSEDVLDPSITQVYKPTKPEK 454


>gb|EMJ11418.1| hypothetical protein PRUPE_ppa015814mg [Prunus persica]
          Length = 524

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/49 (57%), Positives = 32/49 (65%)
 Frame = -1

Query: 297 KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEKKL 151
           K  R G FE+   LW+EA    V L+CS DLLDPS TEVFKP   E+KL
Sbjct: 370 KFCRGGDFEKGRELWDEAMAMGVTLRCSSDLLDPSITEVFKPTRNEEKL 418


>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
            [Cicer arietinum]
          Length = 1253

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = -1

Query: 297  KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEK 157
            KL R G FE+   LW+EA    + LQCSRD+LDPS TEV+KP   EK
Sbjct: 1165 KLCRGGAFEKGRELWDEAKCMGITLQCSRDVLDPSITEVYKPKRPEK 1211


>ref|XP_006394515.1| hypothetical protein EUTSA_v10004085mg [Eutrema salsugineum]
           gi|557091154|gb|ESQ31801.1| hypothetical protein
           EUTSA_v10004085mg [Eutrema salsugineum]
          Length = 489

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/48 (56%), Positives = 33/48 (68%)
 Frame = -1

Query: 297 KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEKK 154
           KL + G FE+   LWEEA   +V L CS DLLDPS TEVFKP+  +K+
Sbjct: 401 KLCKGGDFEKGRELWEEAMSLDVTLSCSVDLLDPSLTEVFKPMKKKKE 448


>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
           lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
           ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
          Length = 489

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 26/48 (54%), Positives = 32/48 (66%)
 Frame = -1

Query: 297 KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEKK 154
           KL + G FE+   LWEEA   NV L CS  LLDPS TEVFKP+  +++
Sbjct: 401 KLCKGGNFEKGKELWEEAMSLNVTLSCSISLLDPSVTEVFKPMKKKEE 448


>gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 487

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/49 (53%), Positives = 31/49 (63%)
 Frame = -1

Query: 297 KLSRSGRFEQATNLWEEATERNVILQCSRDLLDPSKTEVFKPVAAEKKL 151
           KL R G FE+   LW+EA    V L CS D+LDPS TEVFKP    +K+
Sbjct: 402 KLCRGGDFEKGRELWDEAVATGVSLSCSSDVLDPSITEVFKPTRKAEKV 450


Top