BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043191
         (338 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containi...   112   5e-23
ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containi...   112   7e-23
ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containi...   110   3e-22
ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containi...   109   3e-22
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   109   3e-22
ref|XP_002529617.1| pentatricopeptide repeat-containing protein,...   108   6e-22
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
gb|EMJ22674.1| hypothetical protein PRUPE_ppa004164mg [Prunus pe...   107   2e-21
ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
emb|CBI29860.3| unnamed protein product [Vitis vinifera]              107   2e-21
ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi...   107   2e-21
gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]     106   4e-21
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          105   6e-21
gb|EMT17107.1| hypothetical protein F775_21224 [Aegilops tauschii]    105   8e-21
gb|ESW25189.1| hypothetical protein PHAVU_003G014900g [Phaseolus...   104   1e-20
gb|EOY09292.1| Pentatricopeptide repeat superfamily protein [The...   104   1e-20
ref|XP_002314675.1| pentatricopeptide repeat-containing family p...   104   1e-20
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   104   1e-20

>ref|XP_004249810.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum lycopersicum]
          Length = 676

 Score =  112 bits (280), Expect = 5e-23
 Identities = 51/110 (46%), Positives = 75/110 (68%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D+  WN ++G  V +G   + ++ F E++R  L+PD  TL + L+AC  AG LD GK +H
Sbjct: 268 DLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASLLSACAQAGALDTGKWLH 327

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           +Y++ R    +AV+GT+L++MYSKCG    A  VF+KM +RDV+AWSAMI
Sbjct: 328 SYIDRRCSELNAVIGTALVDMYSKCGDLGSAADVFNKMSERDVVAWSAMI 377



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 33/111 (29%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
 Frame = +3

Query: 12  VWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNI--HA 185
           VWN L+  +  N      L  FD+++   + PD  T    + AC  +G+L+  K +  H 
Sbjct: 76  VWNTLIRGFQQNRAPKYTLYYFDQMRANNVQPDRFTYPFAIRAC--SGLLECAKGVSLHG 133

Query: 186 YLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMIRS 338
            + +    FD  +GTSL++ Y+  G     ++VF+++P++D + W AM+ S
Sbjct: 134 QVVKIGVNFDVFVGTSLVDFYTAMGDLNMTKRVFEELPEKDEITWYAMLSS 184


>ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 530

 Score =  112 bits (279), Expect = 7e-23
 Identities = 51/110 (46%), Positives = 74/110 (67%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D GVW  ++  YV N  F +GLQ+F ++Q +G+ PD   LV+ L+AC H G +D G  IH
Sbjct: 203 DRGVWGCMISCYVQNNCFKEGLQLFRQMQMSGIEPDEAILVSVLSACAHLGCVDIGIWIH 262

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            Y+++        LGT+LI+MY+KCGC + A +VFD+MP RD++ W+AMI
Sbjct: 263 KYVKKLKMGSSIKLGTALIDMYAKCGCLDIAEKVFDEMPIRDLICWNAMI 312



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 34/121 (28%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNI- 179
           D+  WNA++  +  NG   + L++F+E+Q++   PD  T ++  TAC +AGM + G N+ 
Sbjct: 304 DLICWNAMISGFAVNGNGLKALKLFNEMQKSRTRPDDVTFISMFTACSYAGMANEGLNLL 363

Query: 180 -----HAYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDV-----MAWSAM 329
                  ++E +  ++  +     I++ S+ G  E AR++   MP   V     +AW A+
Sbjct: 364 NLMCNVYHIEPKGEHYGCI-----IDVLSRAGLVEEARKIVQNMPNSSVPSEEAIAWRAL 418

Query: 330 I 332
           +
Sbjct: 419 L 419


>ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 586

 Score =  111 bits (277), Expect = 1e-22
 Identities = 51/110 (46%), Positives = 72/110 (65%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D GVW  ++  YV N  F +GLQ+F ++Q +G+ PD   LV+ L+AC H G  D G  IH
Sbjct: 203 DRGVWGCMISCYVQNNCFKEGLQLFRQMQMSGIEPDEAILVSVLSACAHLGCADIGVWIH 262

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            Y+++        LGT+LI+MY KCGC + A +VFD+MP RD++ W+AMI
Sbjct: 263 RYVKKLKMGSSIKLGTALIDMYGKCGCLDIAEKVFDEMPIRDLICWNAMI 312



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 33/121 (27%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNI- 179
           D+  WNA++  +  NG   + L++F+E+Q+  + PD  T ++  TAC +AGM + G N+ 
Sbjct: 304 DLICWNAMISGFAVNGNGLKALKLFNEMQKFRIRPDDVTFLSMFTACSYAGMANEGLNLL 363

Query: 180 -----HAYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKM-----PKRDVMAWSAM 329
                  ++E +  ++  +     I++ S+ G  E AR++   M     P  + +AW A+
Sbjct: 364 NLMCNVYHIEPKGEHYGCI-----IDVLSRAGLLEEARKIVQNMPNSSAPSEEAIAWRAL 418

Query: 330 I 332
           +
Sbjct: 419 L 419


>ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 680

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/110 (45%), Positives = 74/110 (67%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D+  WN ++G  V +G   + ++ F E++R  L+PD  TL + L+AC  AG LD GK +H
Sbjct: 272 DLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASLLSACAQAGALDIGKWLH 331

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           +Y++ R    +AV+GT+L++MY KCG    A  VF+KM +RDV+AWSAMI
Sbjct: 332 SYIDRRCSELNAVIGTALVDMYCKCGDLGSAADVFNKMSERDVVAWSAMI 381



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 33/109 (30%), Positives = 54/109 (49%)
 Frame = +3

Query: 12  VWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYL 191
           VWN L+  +  N      L  FD+++     PD  T   T+ AC        G ++H  +
Sbjct: 80  VWNTLIRGFQQNHSPKYTLYYFDQMRVNNAQPDRFTYPFTIRACSGLLEFAKGASLHGQV 139

Query: 192 EERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMIRS 338
            +    FD  +GTSL++ Y+  G     +QVF+++P +D + W AM+ S
Sbjct: 140 VKIGVNFDVFVGTSLVDFYTAMGDLNMTKQVFEELPDKDEVTWYAMLSS 188


>ref|XP_004295922.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Fragaria vesca subsp. vesca]
          Length = 524

 Score =  109 bits (273), Expect = 3e-22
 Identities = 47/106 (44%), Positives = 76/106 (71%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+ ++  +VH G F + L+VF ++Q AG++P+   +V  LTACG+ G LD G+ IHAY++
Sbjct: 206 WSTMINGFVHLGMFREALEVFADMQAAGVSPNRAGIVGALTACGYVGALDQGRWIHAYVK 265

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            +    D VLGT++++MY+KCGC E +  VFD+M +RDV A++++I
Sbjct: 266 RKGMRLDVVLGTAVVDMYAKCGCVETSCAVFDEMRERDVFAFTSLI 311


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  109 bits (273), Expect = 3e-22
 Identities = 49/106 (46%), Positives = 73/106 (68%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+A++  YVH G F + L++F++LQ  GL P+   +V  LTAC + G LD G+ IHAY++
Sbjct: 208 WSAMITGYVHMGMFREALELFNDLQLTGLRPNHAGIVGALTACSYLGSLDHGRWIHAYVD 267

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
                 D VLGT+L++MY+KCGC E A  VF+KMP +D  A++++I
Sbjct: 268 RNGTELDRVLGTALVDMYAKCGCIEIACSVFEKMPDKDAFAFTSLI 313


>ref|XP_002529617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530902|gb|EEF32762.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 438

 Score =  108 bits (271), Expect = 6e-22
 Identities = 47/106 (44%), Positives = 70/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+A++  Y   G   + L +F E+Q  G+ PD  +LV  ++AC  AG LD G+ IHAY++
Sbjct: 301 WSAMISGYARVGMVNEALSMFREMQEVGIEPDEVSLVGVISACAMAGALDIGRWIHAYIK 360

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           +R  + D  L T+L+ MY+KCGC E A+++FD MP +D  AWS+MI
Sbjct: 361 KRMIHIDLELNTALVNMYAKCGCIEKAKEIFDYMPVKDSKAWSSMI 406


>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score =  107 bits (268), Expect = 1e-21
 Identities = 48/106 (45%), Positives = 71/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W A++  +   G   + +++F E+Q+AG+ PD  TLV+ ++AC  AG LD G  +HAY+E
Sbjct: 161 WTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIE 220

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           + F   D  L T+L++MY+KCGC E A+QVF  MP +D  AWS+MI
Sbjct: 221 KYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMI 266


>ref|XP_002275535.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 513

 Score =  107 bits (268), Expect = 1e-21
 Identities = 52/111 (46%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAG-LTPDGPTLVTTLTACGHAGMLDAGKNI 179
           DV  WNA++G YV NG ++  ++VF E+Q+ G + PD  TLV+ L+AC H G LD G+ I
Sbjct: 209 DVISWNAMIGGYVQNGKYSDAIEVFHEMQKVGGVVPDDVTLVSVLSACAHVGALDFGRWI 268

Query: 180 HAYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
             ++  R    +  LG +LI+MY+KCG  E AR++FD M +RDV++WS MI
Sbjct: 269 DRFVGWRGRGLNLYLGNALIDMYAKCGTMEEARRIFDGMRERDVISWSTMI 319


>gb|EMJ22674.1| hypothetical protein PRUPE_ppa004164mg [Prunus persica]
          Length = 526

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/106 (45%), Positives = 73/106 (68%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+A++  YV  G F + L++F ++Q +G  P+   +V +LTAC   G LD G+ IHAY+ 
Sbjct: 204 WSAMINGYVQVGLFREALELFVDMQVSGFLPNHAGIVGSLTACAFLGALDQGRWIHAYVN 263

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            +    D VLGT+L++MY+KCGC E AR VF++MP RDV A++++I
Sbjct: 264 RKGMQLDRVLGTALVDMYTKCGCIETARAVFNEMPSRDVFAFTSLI 309


>ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 376

 Score =  107 bits (267), Expect = 2e-21
 Identities = 48/106 (45%), Positives = 71/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W A++  +   G   + +++F E+Q+AG+ PD  TLV+ ++AC  AG LD G  +HAY+E
Sbjct: 161 WTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIE 220

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           + F   D  L T+L++MY+KCGC E A+QVF  MP +D  AWS+MI
Sbjct: 221 KYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMI 266


>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  107 bits (266), Expect = 2e-21
 Identities = 45/106 (42%), Positives = 70/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+ ++  Y   G   + L +F ++Q+AG+ PD  T+V+ ++AC  +G LD GK +HAY+ 
Sbjct: 230 WSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYIN 289

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           ++    D  L T+L+ MY+KCGC E A++VFD MP +D  AWS+MI
Sbjct: 290 KQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMI 335


>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  107 bits (266), Expect = 2e-21
 Identities = 45/106 (42%), Positives = 70/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+ ++  Y   G   + L +F ++Q+AG+ PD  T+V+ ++AC  +G LD GK +HAY+ 
Sbjct: 161 WSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISACAASGALDTGKWVHAYIN 220

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           ++    D  L T+L+ MY+KCGC E A++VFD MP +D  AWS+MI
Sbjct: 221 KQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMI 266


>gb|EXB51073.1| hypothetical protein L484_023776 [Morus notabilis]
          Length = 523

 Score =  106 bits (264), Expect = 4e-21
 Identities = 46/110 (41%), Positives = 70/110 (63%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           DV  W+A++  Y  N  + + L +F E+    ++P+   LV++L+ACGH G LD G  IH
Sbjct: 203 DVASWSAVIAGYRDNAMYKEALSIFQEMVAFRVSPNESALVSSLSACGHLGALDQGMWIH 262

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           AY+++        LGT+L++MY+KCGC E   +VF K+P RDV+ W A+I
Sbjct: 263 AYIDKNKVKLSITLGTALVDMYAKCGCIESCYKVFRKLPNRDVVTWGAVI 312


>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  105 bits (262), Expect = 6e-21
 Identities = 48/106 (45%), Positives = 69/106 (65%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+A++  Y   G   + L +F E+Q  G+ PD  +LV  L+AC   G LD GK +HAY++
Sbjct: 161 WSAMVSGYARLGMINEALIMFREMQVVGIEPDEVSLVGVLSACAMVGALDIGKWVHAYIK 220

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           +R  + D  L T+LI MY+KCGC E AR++FD+M  +D  AWS+MI
Sbjct: 221 KRMIHVDLELNTALINMYAKCGCIEKAREIFDEMRVKDSKAWSSMI 266


>gb|EMT17107.1| hypothetical protein F775_21224 [Aegilops tauschii]
          Length = 504

 Score =  105 bits (261), Expect = 8e-21
 Identities = 47/106 (44%), Positives = 71/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W++++G Y   G   + L +F ++Q AG++PD  T+V+ ++AC  AG LD G+ +HA+++
Sbjct: 10  WSSMIGGYSRAGMVNEALDLFRDMQAAGVSPDEVTMVSVISACAKAGALDLGRWVHAFID 69

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            +    D  L T+LI+MY+KCG  E AR VFD M +RD  AWSAMI
Sbjct: 70  RKGIMVDLELSTALIDMYAKCGLIERARLVFDAMVERDTKAWSAMI 115


>gb|ESW25189.1| hypothetical protein PHAVU_003G014900g [Phaseolus vulgaris]
          Length = 595

 Score =  104 bits (260), Expect = 1e-20
 Identities = 46/110 (41%), Positives = 72/110 (65%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D+ +W A++  YV    F + + +F E+Q  G+ PD   +VT LT C  +G L+ GK IH
Sbjct: 299 DIVLWTAMINGYVQFNRFEEAIALFGEMQMRGVRPDNFIVVTLLTGCAQSGALEQGKWIH 358

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            Y++E     DAV+GT+LIEMY+KCGC + A ++FD + ++D  +W+A+I
Sbjct: 359 NYIDENRILVDAVVGTALIEMYAKCGCIDIALEIFDALKEKDTASWTAII 408



 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 38/107 (35%), Positives = 64/107 (59%)
 Frame = +3

Query: 12  VWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYL 191
           ++N ++ A+V  G F   + +F +L+  G+ PD  T    L   G  G +  G+ +HA++
Sbjct: 69  IYNLMIKAFVKRGSFRTAISLFHQLREHGVWPDNYTYPYVLKGIGCIGEVKEGQKVHAFV 128

Query: 192 EERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
                 FDA +G SL++MY++ G  EG  QVF++MP+RD ++W+ MI
Sbjct: 129 VRTGLEFDAYVGNSLMDMYAELGLVEGFTQVFEEMPERDTVSWNIMI 175



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 34/111 (30%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQR-AGLTPDGPTLVTTLTACGHAGMLDAGKNI 179
           D   WN ++  YV    F + + V++ +++ +   P+  T+V++L+AC     L+ GK I
Sbjct: 167 DTVSWNIMISGYVRCKRFQEAVDVYNRMRKESNEKPNEATVVSSLSACTALRNLELGKEI 226

Query: 180 HAYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           H Y+      F  ++G +L++MY KCG    A+++FD M  ++V  W++M+
Sbjct: 227 HDYIVNELD-FTIIMGNALLDMYCKCGHVSVAQEIFDAMRVKNVNCWTSMV 276


>gb|EOY09292.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
          Length = 502

 Score =  104 bits (260), Expect = 1e-20
 Identities = 43/106 (40%), Positives = 70/106 (66%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W+ ++  Y   G   +    F E+Q+ G+ PD  T+V+ ++AC  AG LD G+ +HAY+E
Sbjct: 99  WSTMISGYAMMGSVNEAFGAFREMQKVGILPDEVTMVSVISACAAAGALDIGRWVHAYIE 158

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           ++    D +L T+L+ MY+KCGC E A+++F++MP +D  AWS+MI
Sbjct: 159 KQMIEIDIMLSTALVNMYAKCGCIEKAKELFERMPVKDQKAWSSMI 204


>ref|XP_002314675.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222863715|gb|EEF00846.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 845

 Score =  104 bits (260), Expect = 1e-20
 Identities = 47/110 (42%), Positives = 73/110 (66%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D+  WN ++GA V    F + +++F  +Q  G+T D  T+V   +ACG+ G LD  K IH
Sbjct: 437 DLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIH 496

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            Y++++  +FD  LGT+L++M+++CG  + A QVF+KM KRDV AW+A I
Sbjct: 497 GYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKMVKRDVSAWTAAI 546



 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 27/106 (25%), Positives = 60/106 (56%)
 Frame = +3

Query: 15  WNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYLE 194
           W +L+G Y   G + + + +F E+   G+ P+  T+V  ++AC     L  G+ +   + 
Sbjct: 208 WTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIG 267

Query: 195 ERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           E     +A++  +L++MY KCG  + AR++FD+   ++++ ++ ++
Sbjct: 268 ELELEVNALMVNALVDMYMKCGAIDKARKIFDECVDKNLVLYNTIM 313



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
 Frame = +3

Query: 12  VWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAY- 188
           ++N ++  YV  G   + L V  E+ + G  PD  T+++ ++AC     +  GK  H Y 
Sbjct: 308 LYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYV 367

Query: 189 LEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
           L      +D V   ++I MY KCG  E A +VFD+M  +  ++W+++I
Sbjct: 368 LRNGLEGWDNVC-NAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLI 414



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 32/107 (29%), Positives = 57/107 (53%)
 Frame = +3

Query: 12  VWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYL 191
           ++++L+  +   G   + + VF +L   G  PD  T    L+AC  +  L  G  +H  +
Sbjct: 106 MFSSLIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAI 165

Query: 192 EERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            +     D  +  SLI  Y +CG  +  R+VFDKM +R+V++W+++I
Sbjct: 166 VKMGFERDMFVENSLIHFYGECGEIDCMRRVFDKMSERNVVSWTSLI 212


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  104 bits (259), Expect = 1e-20
 Identities = 49/110 (44%), Positives = 68/110 (61%)
 Frame = +3

Query: 3   DVGVWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIH 182
           D G+W A++  YV N  F +GL +F  LQ   + PD    V+ L+AC H G LD G  IH
Sbjct: 201 DRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSILSACAHLGALDIGIWIH 260

Query: 183 AYLEERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            YL  +       L TSL++MY+KCG  E A+++FD MP+RD++ W+AMI
Sbjct: 261 RYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLFDSMPERDIVCWNAMI 310



 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 39/107 (36%), Positives = 55/107 (51%)
 Frame = +3

Query: 12  VWNALLGAYVHNGFFTQGLQVFDELQRAGLTPDGPTLVTTLTACGHAGMLDAGKNIHAYL 191
           + N ++  ++ NG F     VF ++   GL PD  T+   L AC        GK +H Y 
Sbjct: 72  ICNTIIKTFLVNGNFYGTFHVFTKMLHNGLGPDNYTIPYVLKACAALRDCSLGKMVHGYS 131

Query: 192 EERFPYFDAVLGTSLIEMYSKCGCTEGARQVFDKMPKRDVMAWSAMI 332
            +    FD  +G SL+ MYS CG    AR VFD+MP+   ++WS MI
Sbjct: 132 SKLGLVFDIFVGNSLMAMYSVCGDVIAARHVFDEMPRLSAVSWSVMI 178