BLASTX nr result

ID: Zingiber24_contig00043125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00043125
         (307 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEB96142.1| E2F protein [Cocos nucifera]                            84   3e-14
gb|AEB96141.1| E2F protein [Cocos nucifera]                            81   2e-13

>gb|AEB96142.1| E2F protein [Cocos nucifera]
          Length = 451

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
 Frame = -3

Query: 305 GSRTSGDRLAQP-CGQIPQPLKHQHLLLSSPRPPSRADN--HCFTAADGQASGAEVADSL 135
           G R +G+R AQ   GQI QPLK +HL   S RPP  A +  H F+AAD +    +VAD+L
Sbjct: 3   GGRAAGNRSAQQQAGQIFQPLK-RHLPFPSVRPPFVAPDEYHRFSAADCRRIADDVADTL 61

Query: 134 IVNSPLKRKPEQGDNEASKLSEWKTTSGSPEVVINPLV 21
            V +PLKRKP+Q DNEA++ SEW T+ G  E V +PL+
Sbjct: 62  AVKTPLKRKPDQEDNEAAESSEWTTSPGYAEAVTSPLL 99


>gb|AEB96141.1| E2F protein [Cocos nucifera]
          Length = 471

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 48/99 (48%), Positives = 67/99 (67%), Gaps = 4/99 (4%)
 Frame = -3

Query: 305 GSRTSGDRLAQP-CGQIPQPLKHQHLLLSSPRPPSRADN--HCFTAADGQA-SGAEVADS 138
           G R +G+R AQ   GQI QPLK +H L  S +PP  A +  H F+AADG+  +  +V+D+
Sbjct: 3   GGRPAGNRSAQQQAGQIFQPLK-RHPLFPSAKPPFVAPDEYHRFSAADGRRITPDDVSDA 61

Query: 137 LIVNSPLKRKPEQGDNEASKLSEWKTTSGSPEVVINPLV 21
           L++ +PLKRKPEQ DNEA++ SEW  + G  E V +PL+
Sbjct: 62  LVIKTPLKRKPEQEDNEAAESSEWTNSPGYAEAVTSPLL 100


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