BLASTX nr result

ID: Zingiber24_contig00042911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042911
         (216 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM54074.1| GTP cyclohydrolase 1 isoform TaA [Triticum aestivum]    59   9e-07
gb|ABM54073.1| GTP cyclohydrolase 1 isoform TaC [Triticum aestivum]    59   9e-07
gb|EAZ32303.1| hypothetical protein OsJ_16511 [Oryza sativa Japo...    57   2e-06
gb|EAY95924.1| hypothetical protein OsI_17791 [Oryza sativa Indi...    57   2e-06
ref|NP_001054158.1| Os04g0662700 [Oryza sativa Japonica Group] g...    57   2e-06
emb|CAE04839.2| OSJNBa0084K01.11 [Oryza sativa Japonica Group]         57   2e-06
ref|XP_006653848.1| PREDICTED: uncharacterized protein LOC102719...    57   3e-06
dbj|BAJ95470.1| predicted protein [Hordeum vulgare subsp. vulgar...    56   6e-06
gb|ACA63886.1| GTP cyclohydrolase 1 isoform TaA [Hordeum vulgare]      56   6e-06

>gb|ABM54074.1| GTP cyclohydrolase 1 isoform TaA [Triticum aestivum]
          Length = 480

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +3

Query: 30  TRSHVSHWCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSR 209
           +RS    WCP R  E+ L NGH  +I+ N  +S+K+ +  ++MV+AV+S+L  +GEDP R
Sbjct: 243 SRSASLTWCPLRPHEVPLCNGHAKKITTNGASSAKSASIPSNMVSAVSSMLLSLGEDPLR 302

Query: 210 KE 215
           KE
Sbjct: 303 KE 304


>gb|ABM54073.1| GTP cyclohydrolase 1 isoform TaC [Triticum aestivum]
          Length = 480

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/62 (45%), Positives = 42/62 (67%)
 Frame = +3

Query: 30  TRSHVSHWCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSR 209
           +RS    WCP R  E+ L NGH  +I+ N  +S+K+ +  ++MV+AV+S+L  +GEDP R
Sbjct: 243 SRSASLAWCPLRPHEVPLCNGHAKRITTNGASSAKSASIPSNMVSAVSSMLLSLGEDPLR 302

Query: 210 KE 215
           KE
Sbjct: 303 KE 304


>gb|EAZ32303.1| hypothetical protein OsJ_16511 [Oryza sativa Japonica Group]
          Length = 483

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 37/55 (67%)
 Frame = +3

Query: 51  WCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSRKE 215
           WCP RS ++ + NGHC + + N   S K+    ++MV+AV+S+L  +GEDP RKE
Sbjct: 253 WCPLRSHDVPVCNGHCKKATTNGAISPKSVPAPSNMVSAVSSMLLSLGEDPFRKE 307


>gb|EAY95924.1| hypothetical protein OsI_17791 [Oryza sativa Indica Group]
          Length = 483

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 37/55 (67%)
 Frame = +3

Query: 51  WCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSRKE 215
           WCP RS ++ + NGHC + + N   S K+    ++MV+AV+S+L  +GEDP RKE
Sbjct: 253 WCPLRSHDVPVCNGHCKKATTNGAISPKSVPAPSNMVSAVSSMLLSLGEDPFRKE 307


>ref|NP_001054158.1| Os04g0662700 [Oryza sativa Japonica Group]
           gi|113565729|dbj|BAF16072.1| Os04g0662700, partial
           [Oryza sativa Japonica Group]
          Length = 399

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 37/55 (67%)
 Frame = +3

Query: 51  WCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSRKE 215
           WCP RS ++ + NGHC + + N   S K+    ++MV+AV+S+L  +GEDP RKE
Sbjct: 169 WCPLRSHDVPVCNGHCKKATTNGAISPKSVPAPSNMVSAVSSMLLSLGEDPFRKE 223


>emb|CAE04839.2| OSJNBa0084K01.11 [Oryza sativa Japonica Group]
          Length = 451

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 25/55 (45%), Positives = 37/55 (67%)
 Frame = +3

Query: 51  WCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSRKE 215
           WCP RS ++ + NGHC + + N   S K+    ++MV+AV+S+L  +GEDP RKE
Sbjct: 221 WCPLRSHDVPVCNGHCKKATTNGAISPKSVPAPSNMVSAVSSMLLSLGEDPFRKE 275


>ref|XP_006653848.1| PREDICTED: uncharacterized protein LOC102719953 [Oryza brachyantha]
          Length = 459

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/71 (43%), Positives = 45/71 (63%)
 Frame = +3

Query: 3   GVVIEKGDTTRSHVSHWCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASIL 182
           G+ +E+ D+  + VS WCP RS E    NGHC + + N   S K+    ++MV+AV+S+L
Sbjct: 215 GIDMER-DSHSASVS-WCPLRSHEAPACNGHCKKAAANGAISPKSVPAPSNMVSAVSSML 272

Query: 183 CCIGEDPSRKE 215
             +GEDP RKE
Sbjct: 273 LSLGEDPFRKE 283


>dbj|BAJ95470.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326528417|dbj|BAJ93397.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 480

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/62 (45%), Positives = 40/62 (64%)
 Frame = +3

Query: 30  TRSHVSHWCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSR 209
           +RS    WCP R  E+ L NGH  +I+ N   S K+ +  ++MV+AV+S+L  +GEDP R
Sbjct: 243 SRSASLTWCPLRPHEVPLCNGHGKRITTNGATSPKSLSSPSNMVSAVSSMLQSLGEDPLR 302

Query: 210 KE 215
           KE
Sbjct: 303 KE 304


>gb|ACA63886.1| GTP cyclohydrolase 1 isoform TaA [Hordeum vulgare]
          Length = 480

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/62 (45%), Positives = 40/62 (64%)
 Frame = +3

Query: 30  TRSHVSHWCPSRSLEIHLSNGHCLQISENDKASSKTTAPQTSMVAAVASILCCIGEDPSR 209
           +RS    WCP R  E+ L NGH  +I+ N   S K+ +  ++MV+AV+S+L  +GEDP R
Sbjct: 243 SRSASLTWCPLRPHEVPLCNGHGKRITTNGATSPKSLSSPSNMVSAVSSMLQSLGEDPLR 302

Query: 210 KE 215
           KE
Sbjct: 303 KE 304


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