BLASTX nr result

ID: Zingiber24_contig00042824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042824
         (465 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580485.1| PREDICTED: uncharacterized protein LOC100846...    64   3e-08
gb|EAY95331.1| hypothetical protein OsI_17159 [Oryza sativa Indi...    61   1e-07
ref|NP_001174072.1| Os04g0588000 [Oryza sativa Japonica Group] g...    61   1e-07
ref|XP_004953495.1| PREDICTED: serine/arginine repetitive matrix...    57   3e-06

>ref|XP_003580485.1| PREDICTED: uncharacterized protein LOC100846061 [Brachypodium
           distachyon]
          Length = 282

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/58 (55%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
 Frame = +3

Query: 75  MKCSWHPWERGVGVCASCLRERLLALTTEVQVA-------PSPELPSSMEFPRSVSPY 227
           M+C  HP+E GVGVCASCLR+RLLAL      A       P+P+ P+   FPRSVSPY
Sbjct: 1   MRCKRHPYECGVGVCASCLRDRLLALAAAQNEASSLPPAPPTPDQPAVQLFPRSVSPY 58


>gb|EAY95331.1| hypothetical protein OsI_17159 [Oryza sativa Indica Group]
           gi|222629441|gb|EEE61573.1| hypothetical protein
           OsJ_15946 [Oryza sativa Japonica Group]
          Length = 283

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +3

Query: 75  MKCSWHPWERGVGVCASCLRERLLALT---TEVQVAPSPELPSSMEFPRSVSPY 227
           MKCS HP+E GVGVCA CLR+RLLAL     E    P P  P  + FPRSVSPY
Sbjct: 1   MKCSRHPYEGGVGVCAPCLRDRLLALAAAQNEASSLPPPPEPVPV-FPRSVSPY 53


>ref|NP_001174072.1| Os04g0588000 [Oryza sativa Japonica Group]
           gi|32488772|emb|CAE04325.1| OSJNBb0016D16.16 [Oryza
           sativa Japonica Group] gi|255675732|dbj|BAH92800.1|
           Os04g0588000 [Oryza sativa Japonica Group]
          Length = 152

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 33/54 (61%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +3

Query: 75  MKCSWHPWERGVGVCASCLRERLLALT---TEVQVAPSPELPSSMEFPRSVSPY 227
           MKCS HP+E GVGVCA CLR+RLLAL     E    P P  P  + FPRSVSPY
Sbjct: 1   MKCSRHPYEGGVGVCAPCLRDRLLALAAAQNEASSLPPPPEPVPV-FPRSVSPY 53


>ref|XP_004953495.1| PREDICTED: serine/arginine repetitive matrix protein 1-like
           [Setaria italica]
          Length = 294

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 10/61 (16%)
 Frame = +3

Query: 75  MKCSWHPWERGVGVCASCLRERLLALTTE----------VQVAPSPELPSSMEFPRSVSP 224
           M+C  H ++ G GVCA+CLR+RLLAL  E           Q  P+PE P    FPRSVSP
Sbjct: 1   MRCKQHTYQAGGGVCATCLRDRLLALAAERNGASSPPSPAQAPPAPE-PEPAAFPRSVSP 59

Query: 225 Y 227
           Y
Sbjct: 60  Y 60


Top