BLASTX nr result
ID: Zingiber24_contig00042764
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00042764
(279 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containi... 80 3e-13
ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu... 70 4e-10
ref|XP_002328495.1| predicted protein [Populus trichocarpa] 70 4e-10
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi... 69 8e-10
ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containi... 69 8e-10
ref|XP_006838873.1| hypothetical protein AMTR_s00002p00267090 [A... 66 4e-09
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr... 62 6e-08
gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily p... 61 1e-07
ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_006470592.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_006847835.1| hypothetical protein AMTR_s00029p00055730 [A... 57 2e-06
gb|EMT08213.1| hypothetical protein F775_15992 [Aegilops tauschii] 57 2e-06
gb|EMJ09516.1| hypothetical protein PRUPE_ppa002960mg [Prunus pe... 57 2e-06
ref|XP_006446101.1| hypothetical protein CICLE_v10017659mg [Citr... 57 3e-06
gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus pe... 57 3e-06
ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 57 3e-06
ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Sela... 57 3e-06
>ref|XP_004304748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 670
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/74 (50%), Positives = 53/74 (71%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL*R*I 180
G WSSSD++RE+ME GVKK GCSS++VDGV+H+F+++DKRH W +I+ L L +
Sbjct: 596 GRWSSSDKIREIMETKGVKKTAGCSSVVVDGVIHDFVAADKRHPRWEDIFHILLCLKSEM 655
Query: 181 QIDEERVQ*FGLET 222
++DE + F L T
Sbjct: 656 KLDETDLANFALFT 669
>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Vitis vinifera]
Length = 654
Score = 72.8 bits (177), Expect = 4e-11
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTL 159
G W SD++RE+ME GVKK GCSS++VDG++HEF+++DKRH W EI L
Sbjct: 578 GRWKHSDKIREIMESRGVKKTAGCSSVVVDGIIHEFVAADKRHPRWIEIQSIL 630
>ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa]
gi|550338164|gb|ERP60591.1| hypothetical protein
POPTR_0005s05510g [Populus trichocarpa]
Length = 648
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL 168
G WS S ++RE ME GVKK GCSS++VDGVVH FIS+DK H W +I LN L
Sbjct: 581 GRWSYSKKIRETMESRGVKKTAGCSSVVVDGVVHNFISADKCHPGWVDISSILNCL 636
>ref|XP_002328495.1| predicted protein [Populus trichocarpa]
Length = 580
Score = 69.7 bits (169), Expect = 4e-10
Identities = 33/56 (58%), Positives = 39/56 (69%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL 168
G WS S ++RE ME GVKK GCSS++VDGVVH FIS+DK H W +I LN L
Sbjct: 513 GRWSYSKKIRETMESRGVKKTAGCSSVVVDGVVHNFISADKCHPGWVDISSILNCL 568
>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 586
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL 168
G WS SD +RE+M GVKKI GCSS+ VDG+VH+F +S+K+H W +I L++L
Sbjct: 512 GRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFL 567
>ref|XP_004139380.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 68.6 bits (166), Expect = 8e-10
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL 168
G WS SD +RE+M GVKKI GCSS+ VDG+VH+F +S+K+H W +I L++L
Sbjct: 577 GRWSYSDSIREVMNSRGVKKIAGCSSVAVDGMVHDFTASNKQHPRWMDICSILSFL 632
>ref|XP_006838873.1| hypothetical protein AMTR_s00002p00267090 [Amborella trichopoda]
gi|548841379|gb|ERN01442.1| hypothetical protein
AMTR_s00002p00267090 [Amborella trichopoda]
Length = 622
Score = 66.2 bits (160), Expect = 4e-09
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +1
Query: 7 WSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTL 159
W + RVRE M+R GV+K+ G SS++VDGVVH FI+SDKRH EIY L
Sbjct: 546 WGEARRVREAMDRRGVRKVAGFSSIIVDGVVHNFIASDKRHPLSDEIYSVL 596
>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
mitochondrial-like [Citrus sinensis]
Length = 655
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +1
Query: 7 WSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTL 159
WS SD++R++ME GVKK G SS++VDG+ H+F+++DK+H W +I TL
Sbjct: 580 WSYSDKIRDIMESRGVKKTAGRSSVVVDGINHDFVAADKQHPRWLDIQSTL 630
>ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina]
gi|557535048|gb|ESR46166.1| hypothetical protein
CICLE_v10000494mg [Citrus clementina]
Length = 681
Score = 62.4 bits (150), Expect = 6e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +1
Query: 7 WSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTL 159
WS SD++R++ME GVKK G SS++VDG+ H+F+++DK+H W +I TL
Sbjct: 580 WSYSDKIRDIMESRGVKKTAGRSSVVVDGINHDFVAADKQHPRWLDIQSTL 630
>gb|EOY30986.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 847
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/54 (51%), Positives = 35/54 (64%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLN 162
G W R+R ++ G+KK+ GCSS+ VD VVHEF+ SDK H EIYD LN
Sbjct: 639 GRWDDVARIRTLLNNKGMKKVPGCSSIEVDSVVHEFLVSDKVHPRCKEIYDMLN 692
>ref|XP_004133915.1| PREDICTED: pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
gi|449480068|ref|XP_004155790.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g45350,
chloroplastic-like [Cucumis sativus]
Length = 638
Score = 58.2 bits (139), Expect = 1e-06
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLN 162
G+WS++ +VR MM++ + K+ GCS + ++GVVHEF+ DK H + EIY L+
Sbjct: 571 GLWSAASKVRMMMKKQNLTKVPGCSWIELEGVVHEFLVRDKSHPYVSEIYSVLD 624
>ref|XP_006470592.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Citrus sinensis]
Length = 661
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 4 MWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL*R 174
MW + +VR+MME GV+K GCSS+ V+G+++EFI DK H +IYD L L R
Sbjct: 603 MWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCLVQLTR 659
>ref|XP_006847835.1| hypothetical protein AMTR_s00029p00055730 [Amborella trichopoda]
gi|548851140|gb|ERN09416.1| hypothetical protein
AMTR_s00029p00055730 [Amborella trichopoda]
Length = 122
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = +1
Query: 7 WSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL*R*IQI 186
W + + REMME GVKK+ G SS+ VDG +H FI+ D+ H E+Y LN L R I++
Sbjct: 49 WDEARKAREMMEMRGVKKVPGFSSVEVDGAIHRFIAHDRTHPCSKEVYLMLNDLGRQIKL 108
Query: 187 DE 192
+
Sbjct: 109 QD 110
>gb|EMT08213.1| hypothetical protein F775_15992 [Aegilops tauschii]
Length = 473
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLN 162
GM +D+VR MM +GV+K+ GCS + ++GVVHEFI DK H IYD L+
Sbjct: 401 GMKKKADKVRVMMRHLGVEKVPGCSCIELNGVVHEFIVKDKSHTDSDAIYDCLH 454
>gb|EMJ09516.1| hypothetical protein PRUPE_ppa002960mg [Prunus persica]
Length = 617
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFI 111
G WS SD++RE+ME GVKK GCSS++VDGV+H+F+
Sbjct: 577 GRWSYSDKIREIMEIRGVKKTAGCSSVIVDGVIHDFV 613
>ref|XP_006446101.1| hypothetical protein CICLE_v10017659mg [Citrus clementina]
gi|557548712|gb|ESR59341.1| hypothetical protein
CICLE_v10017659mg [Citrus clementina]
Length = 658
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +1
Query: 4 MWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTL 159
MW + +VR+MME GV+K GCSS+ V+G+++EFI DK H +IYD L
Sbjct: 603 MWEEAGKVRKMMEERGVEKTPGCSSIEVNGLLYEFIVRDKSHPELEQIYDCL 654
>gb|EMJ05156.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
Length = 714
Score = 57.0 bits (136), Expect = 3e-06
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL*R 174
G W R+R + +G+KK+ GC+S+ +D VVHEF+ SDK H EIY+ L + R
Sbjct: 559 GRWDDVARIRTRLNDLGIKKVPGCTSIEMDSVVHEFLVSDKAHPLSKEIYEMLKEIDR 616
>ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +1
Query: 4 MWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL*R*IQ 183
MW + +VR+MME GV+K GCSS+ ++G+V++FI DK H +IY+ L L R I+
Sbjct: 606 MWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIE 665
Query: 184 IDE 192
+ E
Sbjct: 666 VIE 668
>ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = +1
Query: 4 MWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL*R*IQ 183
MW + +VR+MME GV+K GCSS+ ++G+V++FI DK H +IY+ L L R I+
Sbjct: 606 MWEQARKVRKMMEERGVEKTPGCSSIEMNGLVYDFIIRDKSHPQSEKIYECLTRLTRQIE 665
Query: 184 IDE 192
+ E
Sbjct: 666 VIE 668
>ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
gi|300142387|gb|EFJ09088.1| hypothetical protein
SELMODRAFT_130453 [Selaginella moellendorffii]
Length = 941
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/56 (50%), Positives = 36/56 (64%)
Frame = +1
Query: 1 GMWSSSDRVREMMERMGVKKIGGCSSLLVDGVVHEFISSDKRHRFWPEIYDTLNYL 168
G WS + R+R+MMERM VKK GCS + + G VHEFIS + +H EI + L L
Sbjct: 786 GRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKL 841