BLASTX nr result
ID: Zingiber24_contig00042720
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00042720 (217 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006292987.1| hypothetical protein CARUB_v10019265mg [Caps... 59 7e-07 ref|XP_002876855.1| hypothetical protein ARALYDRAFT_484214 [Arab... 59 7e-07 gb|AAC32923.1| predicted by genefinder and genscan [Arabidopsis ... 59 9e-07 ref|NP_178405.2| transcription termination factor family protein... 59 9e-07 ref|XP_006395742.1| hypothetical protein EUTSA_v10004730mg [Eutr... 58 1e-06 ref|XP_002522455.1| conserved hypothetical protein [Ricinus comm... 52 8e-06 >ref|XP_006292987.1| hypothetical protein CARUB_v10019265mg [Capsella rubella] gi|482561694|gb|EOA25885.1| hypothetical protein CARUB_v10019265mg [Capsella rubella] Length = 285 Score = 58.9 bits (141), Expect = 7e-07 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = +3 Query: 12 ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGRVHD 149 ELK PQ FSF+LERKIKPRH LKE+ + M L E+LKVSDG+ ++ Sbjct: 227 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNN 272 >ref|XP_002876855.1| hypothetical protein ARALYDRAFT_484214 [Arabidopsis lyrata subsp. lyrata] gi|297322693|gb|EFH53114.1| hypothetical protein ARALYDRAFT_484214 [Arabidopsis lyrata subsp. lyrata] Length = 284 Score = 58.9 bits (141), Expect = 7e-07 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = +3 Query: 12 ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGRVHD 149 ELK PQ FSF+LERKIKPRH LKE+ + M L E+LKVSDG+ ++ Sbjct: 226 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNN 271 >gb|AAC32923.1| predicted by genefinder and genscan [Arabidopsis thaliana] Length = 284 Score = 58.5 bits (140), Expect = 9e-07 Identities = 29/43 (67%), Positives = 34/43 (79%) Frame = +3 Query: 12 ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGR 140 ELK PQ FSF+LERKIKPRH LKE+ + M L E+LKVSDG+ Sbjct: 226 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQ 268 >ref|NP_178405.2| transcription termination factor family protein [Arabidopsis thaliana] gi|28204784|gb|AAO37134.1| hypothetical protein [Arabidopsis thaliana] gi|50058841|gb|AAT69165.1| hypothetical protein At2g03050 [Arabidopsis thaliana] gi|330250565|gb|AEC05659.1| transcription termination factor family protein [Arabidopsis thaliana] Length = 283 Score = 58.5 bits (140), Expect = 9e-07 Identities = 29/43 (67%), Positives = 34/43 (79%) Frame = +3 Query: 12 ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGR 140 ELK PQ FSF+LERKIKPRH LKE+ + M L E+LKVSDG+ Sbjct: 225 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQ 267 >ref|XP_006395742.1| hypothetical protein EUTSA_v10004730mg [Eutrema salsugineum] gi|557092381|gb|ESQ33028.1| hypothetical protein EUTSA_v10004730mg [Eutrema salsugineum] Length = 284 Score = 57.8 bits (138), Expect = 1e-06 Identities = 28/46 (60%), Positives = 36/46 (78%) Frame = +3 Query: 12 ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGRVHD 149 ELK PQ FSF+LERKIKPRH L+E+ + M L E+LKVSDG+ ++ Sbjct: 225 ELKRFPQYFSFSLERKIKPRHRLLREHGILMPLSEMLKVSDGQFNN 270 >ref|XP_002522455.1| conserved hypothetical protein [Ricinus communis] gi|223538340|gb|EEF39947.1| conserved hypothetical protein [Ricinus communis] Length = 290 Score = 51.6 bits (122), Expect(2) = 8e-06 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = +3 Query: 12 ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDG 137 ELK PQ FSF+LERKIKPRH L + + + L +ILKVSDG Sbjct: 231 ELKRFPQYFSFSLERKIKPRHRMLADCGIQLPLWKILKVSDG 272 Score = 23.5 bits (49), Expect(2) = 8e-06 Identities = 9/17 (52%), Positives = 13/17 (76%) Frame = +1 Query: 136 GEFMTRLMEMRFSVDGQ 186 GEF RL+EMR ++ G+ Sbjct: 272 GEFNARLLEMRLAMAGE 288