BLASTX nr result

ID: Zingiber24_contig00042720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042720
         (217 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006292987.1| hypothetical protein CARUB_v10019265mg [Caps...    59   7e-07
ref|XP_002876855.1| hypothetical protein ARALYDRAFT_484214 [Arab...    59   7e-07
gb|AAC32923.1| predicted by genefinder and genscan [Arabidopsis ...    59   9e-07
ref|NP_178405.2| transcription termination factor family protein...    59   9e-07
ref|XP_006395742.1| hypothetical protein EUTSA_v10004730mg [Eutr...    58   1e-06
ref|XP_002522455.1| conserved hypothetical protein [Ricinus comm...    52   8e-06

>ref|XP_006292987.1| hypothetical protein CARUB_v10019265mg [Capsella rubella]
           gi|482561694|gb|EOA25885.1| hypothetical protein
           CARUB_v10019265mg [Capsella rubella]
          Length = 285

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 12  ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGRVHD 149
           ELK  PQ FSF+LERKIKPRH  LKE+ + M L E+LKVSDG+ ++
Sbjct: 227 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNN 272


>ref|XP_002876855.1| hypothetical protein ARALYDRAFT_484214 [Arabidopsis lyrata subsp.
           lyrata] gi|297322693|gb|EFH53114.1| hypothetical protein
           ARALYDRAFT_484214 [Arabidopsis lyrata subsp. lyrata]
          Length = 284

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 12  ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGRVHD 149
           ELK  PQ FSF+LERKIKPRH  LKE+ + M L E+LKVSDG+ ++
Sbjct: 226 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQFNN 271


>gb|AAC32923.1| predicted by genefinder and genscan [Arabidopsis thaliana]
          Length = 284

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 12  ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGR 140
           ELK  PQ FSF+LERKIKPRH  LKE+ + M L E+LKVSDG+
Sbjct: 226 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQ 268


>ref|NP_178405.2| transcription termination factor family protein [Arabidopsis
           thaliana] gi|28204784|gb|AAO37134.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|50058841|gb|AAT69165.1| hypothetical protein
           At2g03050 [Arabidopsis thaliana]
           gi|330250565|gb|AEC05659.1| transcription termination
           factor family protein [Arabidopsis thaliana]
          Length = 283

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 29/43 (67%), Positives = 34/43 (79%)
 Frame = +3

Query: 12  ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGR 140
           ELK  PQ FSF+LERKIKPRH  LKE+ + M L E+LKVSDG+
Sbjct: 225 ELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQ 267


>ref|XP_006395742.1| hypothetical protein EUTSA_v10004730mg [Eutrema salsugineum]
           gi|557092381|gb|ESQ33028.1| hypothetical protein
           EUTSA_v10004730mg [Eutrema salsugineum]
          Length = 284

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 28/46 (60%), Positives = 36/46 (78%)
 Frame = +3

Query: 12  ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDGRVHD 149
           ELK  PQ FSF+LERKIKPRH  L+E+ + M L E+LKVSDG+ ++
Sbjct: 225 ELKRFPQYFSFSLERKIKPRHRLLREHGILMPLSEMLKVSDGQFNN 270


>ref|XP_002522455.1| conserved hypothetical protein [Ricinus communis]
           gi|223538340|gb|EEF39947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 290

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +3

Query: 12  ELKELPQCFSFNLERKIKPRHPSLKENWVWMLLCEILKVSDG 137
           ELK  PQ FSF+LERKIKPRH  L +  + + L +ILKVSDG
Sbjct: 231 ELKRFPQYFSFSLERKIKPRHRMLADCGIQLPLWKILKVSDG 272



 Score = 23.5 bits (49), Expect(2) = 8e-06
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 136 GEFMTRLMEMRFSVDGQ 186
           GEF  RL+EMR ++ G+
Sbjct: 272 GEFNARLLEMRLAMAGE 288


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