BLASTX nr result
ID: Zingiber24_contig00042533
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00042533
(343 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004987425.1| PREDICTED: uncharacterized protein LOC101774... 73 4e-11
ref|NP_001061517.1| Os08g0315200 [Oryza sativa Japonica Group] g... 69 5e-10
gb|ABA97516.1| retrotransposon protein, putative, Ty3-gypsy subc... 69 8e-10
gb|ABB47435.2| retrotransposon protein, putative, Ty3-gypsy subc... 67 3e-09
emb|CAE75883.1| B1234D02.7 [Oryza sativa Japonica Group] gi|3860... 65 7e-09
gb|AAD38284.1|AC007789_10 putative polyprotein [Oryza sativa Jap... 65 9e-09
ref|XP_004974592.1| PREDICTED: uncharacterized protein LOC101769... 65 9e-09
gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subc... 65 9e-09
gb|AAT69668.1| hypothetical protein [Oryza sativa Japonica Group] 65 9e-09
gb|AAM00970.1|AC021892_34 Putative retroelement [Oryza sativa Ja... 64 2e-08
gb|EEC75663.1| hypothetical protein OsI_12452 [Oryza sativa Indi... 64 2e-08
emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group] 64 2e-08
gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subc... 64 2e-08
gb|AAX95377.1| Retrotransposon gag protein, putative [Oryza sati... 64 2e-08
gb|AAL69437.1|AC098565_19 Putative polyprotein [Oryza sativa] gi... 64 2e-08
gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group... 64 2e-08
gb|AAK92543.1|AC051624_1 Putative retroelement [Oryza sativa Jap... 64 2e-08
ref|XP_003562014.1| PREDICTED: uncharacterized protein LOC100838... 64 2e-08
emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group] 64 2e-08
gb|AAV43822.1| hypothetical protein [Oryza sativa Japonica Group... 64 2e-08
>ref|XP_004987425.1| PREDICTED: uncharacterized protein LOC101774209, partial [Setaria
italica]
Length = 536
Score = 72.8 bits (177), Expect = 4e-11
Identities = 34/88 (38%), Positives = 60/88 (68%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+FLSL Q+ ++ EY +F +L+R+ PE VA D + F++GLDGH+Q +LV ++
Sbjct: 136 EFLSLKQEGMSVNEYRDKFIQLSRYAPEKVATDEKKQDHFLEGLDGHIQYQLVAHTFANF 195
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQPSQ 273
+++D+AL++E+ ++R ++KRK SQ
Sbjct: 196 QQLVDKALLVEN-KRRELQEKKRKFNSQ 222
>ref|NP_001061517.1| Os08g0315200 [Oryza sativa Japonica Group]
gi|113623486|dbj|BAF23431.1| Os08g0315200 [Oryza sativa
Japonica Group]
Length = 295
Score = 69.3 bits (168), Expect = 5e-10
Identities = 31/90 (34%), Positives = 57/90 (63%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+FLSL Q N+++ EY EF+ LAR+ P+ V D+ + +F+ GL +QL L +
Sbjct: 172 EFLSLTQGNKSVMEYLCEFNHLARYAPDDVKTDTRKQNRFMNGLSAEMQLELAAHSFLDF 231
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQPSQTS 279
++++R++++ES + + +RKRK+ +Q S
Sbjct: 232 QDLVNRSVVVESKMKNLEAERKRKKAAQIS 261
>gb|ABA97516.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1113
Score = 68.6 bits (166), Expect = 8e-10
Identities = 37/84 (44%), Positives = 53/84 (63%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ G T +
Sbjct: 35 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFLAGLDDELTNQLISGGYTDF 94
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A I QR DRKRK
Sbjct: 95 ERLVDKA--IRQEDQRNKMDRKRK 116
>gb|ABB47435.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1755
Score = 66.6 bits (161), Expect = 3e-09
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 447 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLISGDYADF 506
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQP-----SQTSG 282
++D+A I QR DRKRK P S+T+G
Sbjct: 507 ERLVDKA--IRQEDQRNKMDRKRKSPEAALHSRTAG 540
>emb|CAE75883.1| B1234D02.7 [Oryza sativa Japonica Group]
gi|38605872|emb|CAD39998.3| OSJNBb0052B05.1 [Oryza
sativa Japonica Group]
Length = 873
Score = 65.5 bits (158), Expect = 7e-09
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V + + ++F+ GLD L +L+ T +
Sbjct: 78 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTGAEKQEKFLAGLDDELTNQLISRDYTDF 137
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
+++D+A+ E Q ++ DRKRK
Sbjct: 138 KKLVDKAIRQEDQQNKM--DRKRK 159
>gb|AAD38284.1|AC007789_10 putative polyprotein [Oryza sativa Japonica Group]
Length = 1220
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/84 (40%), Positives = 52/84 (61%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EFDRLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 187 EFRALHQGNRTVTEYLHEFDRLARYAPEDVRTDAKKQEKFLAGLDDELTNQLISGDYADF 246
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A+ E ++ DRKRK
Sbjct: 247 ERLVDKAIRQEDQHNKM--DRKRK 268
>ref|XP_004974592.1| PREDICTED: uncharacterized protein LOC101769666 [Setaria italica]
Length = 190
Score = 65.1 bits (157), Expect = 9e-09
Identities = 32/87 (36%), Positives = 55/87 (63%)
Frame = +1
Query: 13 FLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSYA 192
FLSL Q+ ++ EY +F +L+R+ PE VA + + F++GLDGH+Q RLV ++
Sbjct: 88 FLSLKQEEMSVNEYRDKFIQLSRYAPEKVATNEKKQDHFLEGLDGHIQYRLVAHTFLNFQ 147
Query: 193 EMLDRALIIESAQQRVFPDRKRKQPSQ 273
+++D+AL++ + ++KRK SQ
Sbjct: 148 QLVDKALLVVDKCHEL-QEKKRKFNSQ 173
>gb|ABA93462.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1687
Score = 65.1 bits (157), Expect = 9e-09
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRTMTEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 399 EFRALHQGNRTMTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLISGDYADF 458
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A I QR DRKRK
Sbjct: 459 ERLVDKA--IRQEDQRNKMDRKRK 480
>gb|AAT69668.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 371
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/84 (39%), Positives = 54/84 (64%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q +RT+TEY EF+RLAR+ PE V D R ++F++GL L + L+ +
Sbjct: 151 EFRALKQKDRTVTEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDF 210
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
E++D+A+ +E + R+ +RKRK
Sbjct: 211 QELVDKAIRLEDKKNRM-DNRKRK 233
>gb|AAM00970.1|AC021892_34 Putative retroelement [Oryza sativa Japonica Group]
gi|78708151|gb|ABB47126.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1425
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/91 (39%), Positives = 52/91 (57%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 187 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFLAGLDDELTNQLISGDYADF 246
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQPSQTSG 282
++D+A I QR DRK P SG
Sbjct: 247 ERLVDKA--IRQEDQRNKMDRKSNFPQGASG 275
>gb|EEC75663.1| hypothetical protein OsI_12452 [Oryza sativa Indica Group]
Length = 249
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q +RT+TEY EF+RLAR+ PE V D R ++F++GL L + L+ +
Sbjct: 34 EFRALKQKDRTVTEYLHEFNRLARYAPEYVRTDEERQEKFLEGLKDELSVMLISHDYEDF 93
Query: 190 AEMLDRALIIESAQQRVFPDRKR 258
E++D+A+ +E + R+ +RKR
Sbjct: 94 QELVDKAIRLEDKKNRM-DNRKR 115
>emb|CAH66138.1| H0616A11.2 [Oryza sativa Indica Group]
Length = 1510
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/87 (41%), Positives = 52/87 (59%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 187 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLISGDYADF 246
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQPS 270
++D+A I QR DRKRK S
Sbjct: 247 ERLVDKA--IRQEDQRNKMDRKRKAAS 271
>gb|ABA98204.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1521
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 187 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTKQLISGDYADF 246
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A I QR DRKRK
Sbjct: 247 ERLVDKA--IRQEDQRNKMDRKRK 268
>gb|AAX95377.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
gi|62733997|gb|AAX96106.1| retrotransposon protein,
putative, Ty3-gypsy sub-class [Oryza sativa Japonica
Group] gi|77550108|gb|ABA92905.1| retrotransposon
protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1261
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 185 EFRILHQGNRTVTEYLHEFNRLARYSPEDVRTDAEKQEKFLAGLDDELTNQLISRDYADF 244
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
+++D+A+ E + ++ DRKRK
Sbjct: 245 EKLVDKAICQEDQRNKM--DRKRK 266
>gb|AAL69437.1|AC098565_19 Putative polyprotein [Oryza sativa] gi|22725908|gb|AAN04918.1|
Putative polyprotein [Oryza sativa Japonica Group]
gi|31430211|gb|AAP52157.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 333
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/91 (36%), Positives = 55/91 (60%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q +RT+TEY EF+RLAR+ PE V D R ++F++GL L + L+ +
Sbjct: 151 EFRALKQKDRTVTEYLHEFNRLARYAPEDVRTDEERQEKFLEGLKDELSVMLISHDYEDF 210
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQPSQTSG 282
E++D+A+ +E + R+ D ++ Q SG
Sbjct: 211 QELVDKAIRLEDKKNRM--DNRQSQQLGISG 239
>gb|AAN16322.1| putative polyprotein [Oryza sativa Japonica Group]
gi|31430814|gb|AAP52680.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1796
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 462 EFRALHQGNRTVTEYLQEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLISGDYADF 521
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A I QR DRKRK
Sbjct: 522 ERLVDKA--IRQEDQRNKMDRKRK 543
>gb|AAK92543.1|AC051624_1 Putative retroelement [Oryza sativa Japonica Group]
gi|31431042|gb|AAP52880.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1773
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/84 (39%), Positives = 53/84 (63%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 443 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMAGLDDELTNQLISGDYADF 502
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A+ E + ++ DRKRK
Sbjct: 503 ERLVDKAIRQEDQRNKI--DRKRK 524
>ref|XP_003562014.1| PREDICTED: uncharacterized protein LOC100838358 [Brachypodium
distachyon]
Length = 361
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/86 (34%), Positives = 58/86 (67%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F L Q NRT++EY F++L+R+ P+ V D+ R ++F+ GL+ L ++L + I +Y
Sbjct: 148 EFHKLRQSNRTVSEYIETFNKLSRYAPDDVNTDAKRRERFLDGLNDELAVQLAVVYIPTY 207
Query: 190 AEMLDRALIIESAQQRVFPDRKRKQP 267
++D+A+I+E+ Q ++ + +RK+P
Sbjct: 208 QSLMDKAIILENKQNQM--ENRRKRP 231
>emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
Length = 1421
Score = 63.9 bits (154), Expect = 2e-08
Identities = 35/84 (41%), Positives = 51/84 (60%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F +L Q NRT+TEY EF+RLAR+ PE V D+ + ++F+ GLD L +L+ +
Sbjct: 187 EFRALHQGNRTVTEYLHEFNRLARYAPEDVRTDAEKQEKFMSGLDDELTNQLISGDYADF 246
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
++D+A I QR DRKRK
Sbjct: 247 ERLVDKA--IRQEDQRNKMDRKRK 268
>gb|AAV43822.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55168236|gb|AAV44102.1| hypothetical protein [Oryza
sativa Japonica Group]
Length = 319
Score = 63.9 bits (154), Expect = 2e-08
Identities = 32/84 (38%), Positives = 54/84 (64%)
Frame = +1
Query: 10 DFLSL*QDNRTMTEYNAEFDRLARFCPELVAEDSSRMQQFIQGLDGHLQLRLVGLGITSY 189
+F L QD RT+TE+ EF+RLAR+ PE V D + ++F++GL+ L ++L+ +
Sbjct: 145 EFRELKQDGRTVTEFLHEFNRLARYAPEGVRTDEEKQEKFLEGLNDELSVQLISGDYEDF 204
Query: 190 AEMLDRALIIESAQQRVFPDRKRK 261
+++DRAL +E ++R +KRK
Sbjct: 205 QKLVDRALRLED-KRRKMESKKRK 227