BLASTX nr result

ID: Zingiber24_contig00042528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042528
         (633 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19366.3| unnamed protein product [Vitis vinifera]               75   2e-11
ref|XP_002310885.1| hypothetical protein POPTR_0007s14730g [Popu...    66   7e-09
ref|XP_006426134.1| hypothetical protein CICLE_v10026641mg [Citr...    66   1e-08

>emb|CBI19366.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 47/152 (30%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
 Frame = +2

Query: 50  NMSKSYSLVNIPFSWENQPGISKVIPQEEDDDDNKGNTASPMQEGLYXXXXXXXXXXXXX 229
           N SK +S  N+PF+WEN+PG+ K    +ED   + G+    +Q                 
Sbjct: 2   NQSKIHSQGNVPFAWENKPGVCKARRDDEDCPTDTGHFVIKLQP---------------- 45

Query: 230 XXXXXXXXXXXLHGGAIYVPLPPCAFQSMPMTIMTTEGG---GGDPFLAAYMECTKSRRR 400
                      +HG  I  PLPPC FQ  P    + +G      DPFLAAY ECTK+ R+
Sbjct: 46  PPCPLEKGRPSVHGSQI--PLPPCTFQGPPSRNSSKKGHLRKQEDPFLAAYKECTKNTRK 103

Query: 401 KMDAWSKIRKRISLGFGCGSKWACEVKEDTMI 496
             D  + + +       C  K +C V++D ++
Sbjct: 104 GHDGKTHLGRSSMFNLSC--KHSCNVRDDNLV 133


>ref|XP_002310885.1| hypothetical protein POPTR_0007s14730g [Populus trichocarpa]
           gi|222853788|gb|EEE91335.1| hypothetical protein
           POPTR_0007s14730g [Populus trichocarpa]
          Length = 163

 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 56/162 (34%), Positives = 75/162 (46%), Gaps = 14/162 (8%)
 Frame = +2

Query: 59  KSYSLVNIPFSWENQPGISKVIPQEEDDDD--NKGNTASPMQEGLYXXXXXXXXXXXXXX 232
           K YS  +IPFSWE+ PG+SKVI +E   D   N  N +SP    L+              
Sbjct: 5   KVYSQGSIPFSWEDSPGVSKVIHKEYTIDIGLNAVNISSPTSPILF-------------- 50

Query: 233 XXXXXXXXXXLHGGAIYVPLPPCAFQSM--PMTIMTTEG---GGGDPFLAAYMECTKSRR 397
                     L    I +PLPPC    +  P    + +G      DPFLAAY ECTK+ R
Sbjct: 51  PRDSDTSYKVLGSHGIKIPLPPCVSAKIEPPRRSKSVKGFRWWQEDPFLAAYKECTKNGR 110

Query: 398 R-------KMDAWSKIRKRISLGFGCGSKWACEVKEDTMIRL 502
                   K +  SK+RK   L F C  K +C+V++D ++ L
Sbjct: 111 NGKLSSESKKNVRSKLRKS-RLIFSC--KDSCDVQDDNLVML 149


>ref|XP_006426134.1| hypothetical protein CICLE_v10026641mg [Citrus clementina]
           gi|557528124|gb|ESR39374.1| hypothetical protein
           CICLE_v10026641mg [Citrus clementina]
          Length = 168

 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 49/161 (30%), Positives = 68/161 (42%), Gaps = 13/161 (8%)
 Frame = +2

Query: 59  KSYSLVNIPFSWENQPGISKVIPQEEDDDDNKGNTASPMQEGLYXXXXXXXXXXXXXXXX 238
           K  S  +IPFSWE++PG+SK+   +E            + +GL+                
Sbjct: 5   KIQSQGSIPFSWEDKPGVSKITTPQE----------CSLNQGLHALNLESPSPPPQPPRT 54

Query: 239 XXXXXXXXLHGGA--IYVPLPPCAFQSMPMTIMTTEGGGG----DPFLAAYMECTKSRRR 400
                          + +PLPPC  Q  P    + +G  G    DPFLAAYMECTKS R 
Sbjct: 55  ASSNPNSLSLSAEEILKIPLPPCPSQQPPRRTTSAKGVIGWWQEDPFLAAYMECTKSSRS 114

Query: 401 KM-------DAWSKIRKRISLGFGCGSKWACEVKEDTMIRL 502
           +           SK +K+    F C  K +CE  +D  +RL
Sbjct: 115 RQRKKSNPSSVGSKPKKKSKFLFSC--KGSCETHDDNFVRL 153


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