BLASTX nr result

ID: Zingiber24_contig00042483 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042483
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002455712.1| hypothetical protein SORBIDRAFT_03g022150 [S...    57   3e-06
gb|EOY33547.1| UPF0481 protein, putative [Theobroma cacao]             56   6e-06
ref|XP_006471400.1| PREDICTED: UPF0481 protein At3g47200-like [C...    55   1e-05
ref|XP_006424318.1| hypothetical protein CICLE_v10028367mg [Citr...    55   1e-05

>ref|XP_002455712.1| hypothetical protein SORBIDRAFT_03g022150 [Sorghum bicolor]
           gi|241927687|gb|EES00832.1| hypothetical protein
           SORBIDRAFT_03g022150 [Sorghum bicolor]
          Length = 524

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
 Frame = +3

Query: 24  NKDSTSTIHIDEWARELENKASYE---TQRQVRYQNSTIFKVSENLRSVQSEAYEPMIVS 194
           N  STST+ +++W   LE    Y    TQ     ++  I KV + +  +   AYEP  +S
Sbjct: 14  NNISTSTVDMEQWISILEANRRYYVSLTQTDSSIRHFVISKVPQMIFELDRNAYEPFYLS 73

Query: 195 LGPYHYHKPHLQVTNQSKWLLLH 263
           +GPYH+  P LQV  + KW  L+
Sbjct: 74  IGPYHHGNPALQVLEKKKWNYLN 96


>gb|EOY33547.1| UPF0481 protein, putative [Theobroma cacao]
          Length = 492

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
 Frame = +3

Query: 15  IMENKDSTSTIHIDEWARELENKASYETQRQVRY---QNSTIFKVSENLRSVQSEAYEPM 185
           +ME  D   T H  +  R +E K +   +   +Y   ++  IF+V E+L  +  +AY+P 
Sbjct: 25  VMEAADMDETSH--QVIRTMEAKINQPPKLLNKYAGNKSCCIFRVPESLVQINEKAYQPH 82

Query: 186 IVSLGPYHYHKPHLQVTNQSKWLLLHKL 269
           I+S+GPYH+ K HL++  + KW  L  L
Sbjct: 83  IISIGPYHHGKEHLKMMQEHKWRFLGSL 110


>ref|XP_006471400.1| PREDICTED: UPF0481 protein At3g47200-like [Citrus sinensis]
          Length = 470

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +3

Query: 57  EWARELENKASYETQ---RQVRYQNSTIFKVSENLRSVQSEAYEPMIVSLGPYHYHKPHL 227
           +W   +E K +   +   +    +   IF+V E+L  +  +AY+P IVS+GPYH+ K HL
Sbjct: 42  DWLASMEAKINTSPKFLNKSAGKETCCIFRVPESLVEINEKAYQPHIVSMGPYHHGKDHL 101

Query: 228 QVTNQSKWLLLHKL 269
           +V  + KW  L  L
Sbjct: 102 KVIQEHKWRYLRSL 115


>ref|XP_006424318.1| hypothetical protein CICLE_v10028367mg [Citrus clementina]
           gi|557526252|gb|ESR37558.1| hypothetical protein
           CICLE_v10028367mg [Citrus clementina]
          Length = 469

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
 Frame = +3

Query: 57  EWARELENKASYETQ---RQVRYQNSTIFKVSENLRSVQSEAYEPMIVSLGPYHYHKPHL 227
           +W   +E K +   +   +    +   IF+V E+L  +  +AY+P IVS+GPYH+ K HL
Sbjct: 41  DWLASMEAKINTSPKFLNKSAGKETCCIFRVPESLVEINEKAYQPHIVSMGPYHHGKDHL 100

Query: 228 QVTNQSKWLLLHKL 269
           +V  + KW  L  L
Sbjct: 101 KVIQEHKWRYLRSL 114


Top