BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042479
         (242 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containi...    90   3e-16
ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citr...    90   3e-16
gb|EMT00923.1| hypothetical protein F775_21545 [Aegilops tauschii]     90   3e-16
ref|XP_004960291.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
gb|AFW57619.1| putative pentatricopeptide repeat family protein ...    88   1e-15
ref|NP_001169748.1| uncharacterized protein LOC100383629 [Zea ma...    88   1e-15
gb|EOY11338.1| Tetratricopeptide repeat-like superfamily protein...    88   1e-15
ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]    86   7e-15
ref|XP_002440589.1| hypothetical protein SORBIDRAFT_09g003570 [S...    85   1e-14
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...    84   3e-14
gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus pe...    83   3e-14
ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis]      81   2e-13
ref|XP_006361845.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13
ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Popu...    79   6e-13
ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...    79   6e-13

>ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Citrus sinensis]
          Length = 899

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFA-EEANSLT 65
           +YF+ GS S  RKVF  MR RNV+TWTA++SGL QN L E+ L +F  MR      NSLT
Sbjct: 200 SYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMRLGLINPNSLT 259

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S ++ACSGL+AL  GRQIH
Sbjct: 260 YLSSVIACSGLQALCEGRQIH 280


>ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citrus clementina]
           gi|557535448|gb|ESR46566.1| hypothetical protein
           CICLE_v10000527mg [Citrus clementina]
          Length = 659

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFA-EEANSLT 65
           +YF+ GS S  RKVF  MR RNV+TWTA++SGL QN L E+ L +F  MR      NSLT
Sbjct: 200 SYFKCGSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKMRLGLINPNSLT 259

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S ++ACSGL+AL  GRQIH
Sbjct: 260 YLSSVIACSGLQALCEGRQIH 280


>gb|EMT00923.1| hypothetical protein F775_21545 [Aegilops tauschii]
          Length = 613

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEANSLTY 62
           AYF  GSP  A++ F GM  RNV+TWTAM+SG+A+  L EDS+ +F  MR   +AN+ TY
Sbjct: 166 AYFECGSPDSAKRAFQGMTGRNVITWTAMISGMARAELYEDSILLFRQMRRTVDANNATY 225

Query: 61  TSVLLACSGLRALPVGRQIH 2
           +S LLAC+G  A   G+QIH
Sbjct: 226 SSSLLACAGSLAAKEGKQIH 245


>ref|XP_004960291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Setaria italica]
          Length = 614

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 45/80 (56%), Positives = 56/80 (70%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEANSLTY 62
           AYF  GSP  A +VF  M  RNV+TWTAMVSG+A+  L  +SL++F  MR A +ANS TY
Sbjct: 171 AYFECGSPGSAERVFGAMVERNVITWTAMVSGMARAELDRESLSLFRQMRRAVDANSATY 230

Query: 61  TSVLLACSGLRALPVGRQIH 2
           +S LLAC+G  A   G+QIH
Sbjct: 231 SSSLLACAGSLAAREGQQIH 250


>gb|AFW57619.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 611

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/80 (55%), Positives = 56/80 (70%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEANSLTY 62
           AYF   SP  A +VFDGM  RNV+TWTAMVSG+A+     +SL++F  MR A +AN  +Y
Sbjct: 170 AYFECSSPGSAERVFDGMADRNVITWTAMVSGMARAERYSESLSLFRQMRRAVDANRASY 229

Query: 61  TSVLLACSGLRALPVGRQIH 2
           +S LLAC+G RA   G+QIH
Sbjct: 230 SSSLLACAGSRAAREGQQIH 249


>ref|NP_001169748.1| uncharacterized protein LOC100383629 [Zea mays]
           gi|224031397|gb|ACN34774.1| unknown [Zea mays]
          Length = 546

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/80 (55%), Positives = 56/80 (70%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEANSLTY 62
           AYF   SP  A +VFDGM  RNV+TWTAMVSG+A+     +SL++F  MR A +AN  +Y
Sbjct: 105 AYFECSSPGSAERVFDGMADRNVITWTAMVSGMARAERYSESLSLFRQMRRAVDANRASY 164

Query: 61  TSVLLACSGLRALPVGRQIH 2
           +S LLAC+G RA   G+QIH
Sbjct: 165 SSSLLACAGSRAAREGQQIH 184


>gb|EOY11338.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 762

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/81 (58%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEA-NSLT 65
           +Y + G  S  R+VFD M  RNV+TWTAM+SGL QN L E+SL +F+ MR      NSLT
Sbjct: 202 SYSKCGCLSSGRQVFDEMFERNVITWTAMISGLVQNELYEESLELFNEMRLGSVCPNSLT 261

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSGL+AL  GRQIH
Sbjct: 262 YLSSLMACSGLQALNEGRQIH 282


>ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Brachypodium distachyon]
          Length = 614

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/80 (53%), Positives = 55/80 (68%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEANSLTY 62
           AYF   SP  A + F GM  RNV+TWTAM+SG+A+  L +DS+ +F  MR   +ANS TY
Sbjct: 167 AYFECESPGSAERAFHGMAERNVITWTAMISGMAREELYKDSIVLFQQMRRTVDANSATY 226

Query: 61  TSVLLACSGLRALPVGRQIH 2
           +S LLAC+G  AL  G+QIH
Sbjct: 227 SSSLLACAGSLALKEGQQIH 246


>ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Glycine max]
          Length = 656

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 47/81 (58%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAE-EANSLT 65
           +YF+ G  S  R+VFD M  RNVVTWTA++SGLAQN   ED L +F  MR      NSLT
Sbjct: 200 SYFKCGCFSQGRQVFDEMLERNVVTWTAVISGLAQNEFYEDGLRLFDQMRRGSVSPNSLT 259

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSGL+AL  GR+IH
Sbjct: 260 YLSALMACSGLQALLEGRKIH 280


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAE-EANSLT 65
           +YFR G  S  R+VFD M  +NVVTWTA++SGL+Q    E+SL +F  MR    + NSLT
Sbjct: 200 SYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLT 259

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSGL+A+  GRQIH
Sbjct: 260 YLSSLMACSGLQAIREGRQIH 280


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/81 (55%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAE-EANSLT 65
           +YFR G  S  R+VFD M  +NVVTWTA++SGL+Q    E+SL +F  MR    + NSLT
Sbjct: 86  SYFRCGCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVDPNSLT 145

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSGL+A+  GRQIH
Sbjct: 146 YLSSLMACSGLQAIREGRQIH 166


>ref|XP_002440589.1| hypothetical protein SORBIDRAFT_09g003570 [Sorghum bicolor]
           gi|241945874|gb|EES19019.1| hypothetical protein
           SORBIDRAFT_09g003570 [Sorghum bicolor]
          Length = 613

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 43/80 (53%), Positives = 54/80 (67%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEANSLTY 62
           AYF   SP  A +VFD M  RNVVTWTAMVSG+A+     +SL++F  MR A +AN  +Y
Sbjct: 173 AYFECSSPGSAERVFDAMADRNVVTWTAMVSGMARAERYRESLSLFRQMRHAVDANRASY 232

Query: 61  TSVLLACSGLRALPVGRQIH 2
           +S LLAC+G  A   G+QIH
Sbjct: 233 SSSLLACAGSLAASEGQQIH 252


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 45/80 (56%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -2

Query: 238 YFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFA-EEANSLTY 62
           + R+G     R+VFD M  RNV+TWTA++SGL+QN + EDSL +F  MR    E N LTY
Sbjct: 33  FLRNGDLDTGRQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTY 92

Query: 61  TSVLLACSGLRALPVGRQIH 2
            S L ACSGL+AL  GRQIH
Sbjct: 93  LSSLTACSGLQALEKGRQIH 112


>gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus persica]
          Length = 646

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 45/81 (55%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRF-AEEANSLT 65
           +Y + GS    R+VFD M  RNV+TWTAM+SGLAQN    +SL +F  MR    + NSLT
Sbjct: 204 SYCKCGSFGSGRRVFDEMFERNVITWTAMISGLAQNEFYVESLELFLEMRSGVVDPNSLT 263

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y + L ACSGL+A+ VGRQIH
Sbjct: 264 YLASLTACSGLQAISVGRQIH 284


>ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Cicer arietinum]
          Length = 661

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 46/81 (56%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAE-EANSLT 65
           +YF+ G  S  RKVFD M  RNVVTWTA++SGLAQN   EDSL +F  MR      N LT
Sbjct: 205 SYFKCGCFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFTRMRCGSVNPNVLT 264

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSG +AL  G++IH
Sbjct: 265 YLSSLMACSGSQALKDGQKIH 285


>gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis]
          Length = 656

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 44/81 (54%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEA-NSLT 65
           +YF+    S  R+VFD +  RNV+TWTAM+SGL +N L ++SL  F  MR      NSLT
Sbjct: 200 SYFKCRCSSSGRRVFDELLERNVITWTAMISGLVRNELYKESLEFFVLMRSGTVCPNSLT 259

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSGL+AL  GRQIH
Sbjct: 260 YLSSLMACSGLQALSEGRQIH 280


>ref|XP_006361845.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Solanum tuberosum]
          Length = 667

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEA-NSLT 65
           +YFR G     R+VFD M  RNV++WTA++SGLAQN   E+SL +   M+ A    N LT
Sbjct: 197 SYFRCGCADSGRQVFDEMAMRNVISWTAVISGLAQNEFCEESLDLLVKMQGAAVVPNYLT 256

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S LLACSG++AL   RQIH
Sbjct: 257 YLSALLACSGMKALGEARQIH 277


>ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Solanum lycopersicum]
          Length = 667

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRFAEEA-NSLT 65
           +YFR G     R+VFD M  RNV++WTA++SGLAQN   E+SL +   M+ A    N LT
Sbjct: 197 SYFRCGCADSGRQVFDEMDMRNVISWTAVISGLAQNEFCEESLDLLVKMQNAAVVPNYLT 256

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S LLACSG++AL   RQIH
Sbjct: 257 YLSALLACSGMKALGEARQIH 277


>ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Populus trichocarpa]
           gi|550324744|gb|EEE95461.2| hypothetical protein
           POPTR_0013s02200g [Populus trichocarpa]
          Length = 670

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 44/81 (54%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNM-RFAEEANSLT 65
           +YF+ G  S   +VFD M  RNV+TWTA++SGL Q+ L  DSL +F  M     E NSLT
Sbjct: 196 SYFKCGFSSSGMQVFDEMLERNVITWTAIISGLVQSELYRDSLRLFVEMTNGLVEPNSLT 255

Query: 64  YTSVLLACSGLRALPVGRQIH 2
           Y S L+ACSGL+AL  G QIH
Sbjct: 256 YLSSLMACSGLQALREGCQIH 276


>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
 Frame = -2

Query: 241 AYFRSGSPSCARKVFDGMRCRNVVTWTAMVSGLAQNLLPEDSLAMFHNMRF--AEEANSL 68
           +YF+    S  RKVFD M  RNVVTWTA++SGLAQN   EDSL +F  MR   +   N L
Sbjct: 193 SYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVL 252

Query: 67  TYTSVLLACSGLRALPVGRQIH 2
           TY S L+ACSGL+ L  G++IH
Sbjct: 253 TYLSSLMACSGLQVLRDGQKIH 274