BLASTX nr result

ID: Zingiber24_contig00042411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042411
         (551 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315782.2| hypothetical protein POPTR_0010s10000g [Popu...    60   5e-07

>ref|XP_002315782.2| hypothetical protein POPTR_0010s10000g [Populus trichocarpa]
           gi|550329479|gb|EEF01953.2| hypothetical protein
           POPTR_0010s10000g [Populus trichocarpa]
          Length = 1613

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 66/199 (33%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
 Frame = +3

Query: 3   KQKRPRPVKFGEESPTSPVVLHNISSLSAPAPKVEYENPEGLSPRSGSNSATPTVKTGGA 182
           K+KRPRPVK+ +E PT+     N S LS    KV+ + P  +   +  NS +   + GG 
Sbjct: 365 KRKRPRPVKYDDEHPTN-FPARNSSILS--IAKVDVDQPARIDSSNLENSGS-AAENGGV 420

Query: 183 PVDISVSQ--DGLFDGQQQESAKAEKSKIQDLLPSTGGSNKGDRVENREELVLSPRVDVD 356
             D+  +Q    + + Q QE+ K E   I D  P+T  S   D     EE   SP+ +  
Sbjct: 421 SHDLLANQAAPAMTEAQLQEAVKLENHPISDSKPTTEESECRDLGGLIEE-TRSPKKEST 479

Query: 357 VSL-----CET-TAKK-------IPPQRIKEEKFKFDLMV-LPGKLSPEGN---DFNVLD 485
            SL     CE+ TA K       I  QR  EEKF+ DLM   P + SPE +   DF  +D
Sbjct: 480 PSLRLGDDCESLTANKANLMVSEIDSQR--EEKFQIDLMAPPPSRSSPERDSEIDFVAVD 537

Query: 486 SDHKLQRLDIEMAPELSKD 542
               +   + E  P + K+
Sbjct: 538 PKSMVTYGETEKKPVMVKE 556


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