BLASTX nr result
ID: Zingiber24_contig00042395
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00042395
(525 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 241 6e-62
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 241 6e-62
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 239 3e-61
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 238 5e-61
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 238 5e-61
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 238 6e-61
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 228 8e-58
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 220 2e-55
ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Sela... 213 2e-53
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 213 2e-53
ref|XP_001757221.1| predicted protein [Physcomitrella patens] gi... 201 8e-50
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 194 8e-48
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 194 8e-48
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 194 1e-47
ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III s... 194 1e-47
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 194 1e-47
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 194 1e-47
gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [... 192 5e-47
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 191 9e-47
gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Mor... 189 4e-46
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 241 bits (616), Expect = 6e-62
Identities = 119/173 (68%), Positives = 142/173 (82%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS V G SNEDSIT+ILK I NTNS+L+E+L+ KC + W LQ QVVEY+
Sbjct: 257 IRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYI 316
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+APS+ S++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LM
Sbjct: 317 NSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILM 376
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTA 524
A+ LT+PERVS +NIEKLRQ I NGP K+PGANFI+ PDGT+ HL+Y D++ A
Sbjct: 377 ARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKLHLKYCDRRIA 429
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 241 bits (616), Expect = 6e-62
Identities = 119/173 (68%), Positives = 142/173 (82%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS V G SNEDSIT+ILK I NTNS+L+E+L+ KC + W LQ QVVEY+
Sbjct: 256 IRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYI 315
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+APS+ S++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LM
Sbjct: 316 NSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILM 375
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTA 524
A+ LT+PERVS +NIEKLRQ I NGP K+PGANFI+ PDGT+ HL+Y D++ A
Sbjct: 376 ARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKLHLKYCDRRIA 428
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 239 bits (610), Expect = 3e-61
Identities = 116/173 (67%), Positives = 139/173 (80%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS V G SNED IT IL+ I+NTNS+L+ L+ P KC + W LQ QVVEY+
Sbjct: 256 IRPSVFVGGGRMSNEDGITCILRNIVNTNSILKGILQNGDPLMKCFDCWQLLQLQVVEYI 315
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+APS+ + +NRGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LM
Sbjct: 316 NSDAPSLTDPQNRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLM 375
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTA 524
A+ LT+PERVS +NIEKLRQ I NGP K+PGANF+ PDGT+ HL+Y D++ A
Sbjct: 376 ARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFVTQPDGTKLHLKYCDRRIA 428
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 238 bits (608), Expect = 5e-61
Identities = 118/173 (68%), Positives = 141/173 (81%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS V G SNEDSIT+ILK I NTNS+L+E+L+ KC + W LQ QVVEY+
Sbjct: 256 IRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKCFDCWQHLQLQVVEYI 315
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+APS+ S++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LM
Sbjct: 316 NSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPILM 375
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTA 524
A+ LT+PERVS +NIEKLRQ I NGP K+PGANFI+ DGT+ HL+Y D++ A
Sbjct: 376 ARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQTDGTKLHLKYCDRRIA 428
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 238 bits (608), Expect = 5e-61
Identities = 119/171 (69%), Positives = 140/171 (81%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS +V +SNEDSIT+ILK I+NTNS+L+E L P KC + W LQ QVVEYV
Sbjct: 256 IRPSVVVGNSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKCFDCWQYLQLQVVEYV 315
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+APS+ S++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNLKITEVAIP+LM
Sbjct: 316 NSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLM 375
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
A+ LT+PERVS +NIEKLRQ I NGP KYPGANF+ PDG +Q L+Y D++
Sbjct: 376 ARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRR 426
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 238 bits (607), Expect = 6e-61
Identities = 118/171 (69%), Positives = 141/171 (82%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS +V + +SNEDSIT+ILK I+NTNS+L+E L P KC + W LQ QVVEYV
Sbjct: 256 IRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTGGPFTKCFDCWQYLQLQVVEYV 315
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+AP + +S++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNLKITEVAIP+LM
Sbjct: 316 NSDAPCLPDSQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLKITEVAIPVLM 375
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
A+ LT+PERVS +NIEKLRQ I NGP KYPGANF+ PDG +Q L+Y D++
Sbjct: 376 ARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANFVTQPDGMKQSLKYGDRR 426
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Setaria italica]
Length = 1397
Score = 228 bits (580), Expect = 8e-58
Identities = 114/171 (66%), Positives = 139/171 (81%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS +V +SNEDSIT ILK I+NTNS+L+E L+ KC + W LQ QVVE+V
Sbjct: 259 IRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETLQTGGLFSKCFDCWQQLQLQVVEFV 318
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+AP + S++RGLVQRLKGK GRFRGNLSGKRTE+TGRTVISPDPNL+ITEVAIP+LM
Sbjct: 319 NSDAPCLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISPDPNLRITEVAIPVLM 378
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
A+ LT+PERVS +N+EKLRQ I NGP K+PGANFI+ PDGT+ L+Y D++
Sbjct: 379 ARVLTYPERVSNYNLEKLRQCIRNGPYKHPGANFIITPDGTKLSLKYGDRR 429
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 220 bits (560), Expect = 2e-55
Identities = 109/173 (63%), Positives = 133/173 (76%)
Frame = +3
Query: 6 IRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEYV 185
IRPS V SNEDSIT IL+ I+N NS L+ ++ P KC W+ LQ+ V+EY+
Sbjct: 261 IRPSRFVAGTTMSNEDSITSILRNIVNANSHLKLTIQDGQVPMKCFTWWEQLQDNVIEYI 320
Query: 186 NSEAPSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEVAIPMLM 365
NS+A S+ +SK+ GL+QRLKGK GRFRGNLSGKRTE TGRTVISPDPNL+ITEVAIP+LM
Sbjct: 321 NSDASSLQDSKDCGLIQRLKGKTGRFRGNLSGKRTEHTGRTVISPDPNLRITEVAIPVLM 380
Query: 366 AKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTA 524
A+ LT+PERV+ +NIEKLRQ I NGP K+PGANFI+ PD T+ HL Y D+ A
Sbjct: 381 ARVLTYPERVTYYNIEKLRQCIRNGPHKHPGANFIIQPDETKLHLNYCDRSRA 433
>ref|XP_002974416.1| hypothetical protein SELMODRAFT_442419 [Selaginella moellendorffii]
gi|300158014|gb|EFJ24638.1| hypothetical protein
SELMODRAFT_442419 [Selaginella moellendorffii]
Length = 1348
Score = 213 bits (543), Expect = 2e-53
Identities = 105/177 (59%), Positives = 134/177 (75%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS +DA SNED +TI L II N+ +R LE + KC+E+WD LQ QV Y
Sbjct: 274 AIRPSVEMDAAVGSNEDDVTIKLMHIIEQNNQIRACLESGLSIAKCMEIWDFLQIQVAMY 333
Query: 183 VNSEAPSVLNSKN-----RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NSE P + + RG VQRLKGKQGRFRGNLSGKR +FTGRTVISPDPNLK++EV
Sbjct: 334 INSELPGLPPNMQTGKPLRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEV 393
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
A+P+LMA+ LT+PE+VSAHNIEKLRQR+ NG +K+PGANF++ PDG ++ L++ D+K
Sbjct: 394 AVPILMAQTLTYPEKVSAHNIEKLRQRVINGKEKHPGANFVVFPDGVKRFLKFGDRK 450
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 213 bits (543), Expect = 2e-53
Identities = 105/177 (59%), Positives = 134/177 (75%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS +DA SNED +TI L II N+ +R LE + KC+E+WD LQ QV Y
Sbjct: 274 AIRPSVEMDAAVGSNEDDVTIKLMHIIEQNNQIRACLESGLSIAKCMEIWDFLQIQVAMY 333
Query: 183 VNSEAPSVLNSKN-----RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NSE P + + RG VQRLKGKQGRFRGNLSGKR +FTGRTVISPDPNLK++EV
Sbjct: 334 INSELPGLPPNMQTGKPLRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKVSEV 393
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
A+P+LMA+ LT+PE+VSAHNIEKLRQR+ NG +K+PGANF++ PDG ++ L++ D+K
Sbjct: 394 AVPILMAQTLTYPEKVSAHNIEKLRQRVINGKEKHPGANFVVFPDGVKRFLKFGDRK 450
>ref|XP_001757221.1| predicted protein [Physcomitrella patens]
gi|162691719|gb|EDQ78080.1| predicted protein
[Physcomitrella patens]
Length = 1397
Score = 201 bits (511), Expect = 8e-50
Identities = 101/178 (56%), Positives = 132/178 (74%), Gaps = 6/178 (3%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS +++ A SNED IT+ L GI+N N+ LR +E + K +E W+ LQ+QV +
Sbjct: 268 AIRPSVEMESAAGSNEDDITVRLLGILNCNNSLRTCVEQGLAAEKTMETWELLQSQVSQL 327
Query: 183 VNSEAP------SVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITE 344
+NSE P + RG VQRLKGKQGRFRGNLSGKR +FTGRTVISPDPNLKITE
Sbjct: 328 INSETPVPRSEQPTSGKQPRGFVQRLKGKQGRFRGNLSGKRVDFTGRTVISPDPNLKITE 387
Query: 345 VAIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
VA+P+LMA+ LT+PE+VS +NI+KLR RI NG K+PGANFI+ PDG + +L++ D++
Sbjct: 388 VAVPLLMAQLLTYPEKVSRYNIDKLRGRIINGMTKHPGANFIIFPDGNKLYLKFGDRR 445
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 194 bits (494), Expect = 8e-48
Identities = 103/177 (58%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS +D G SNE+ +T LK II N+ L ++L+ KCL WD LQ +V +Y
Sbjct: 260 AIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQY 319
Query: 183 VNSEAPSVLNSKNR-----GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V + G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 320 INSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 379
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
AIP+LMAK L++PERVS HNIEKLRQ I NGP KYPGA I PDG+ + L + +K
Sbjct: 380 AIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRK 436
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 194 bits (494), Expect = 8e-48
Identities = 103/177 (58%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS +D G SNE+ +T LK II N+ L ++L+ KCL WD LQ +V +Y
Sbjct: 260 AIRPSVFMDGGTQSNENDVTERLKRIIQANASLHQELQDTGSTSKCLAGWDYLQIEVAQY 319
Query: 183 VNSEAPSVLNSKNR-----GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V + G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 320 INSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 379
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
AIP+LMAK L++PERVS HNIEKLRQ I NGP KYPGA I PDG+ + L + +K
Sbjct: 380 AIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRK 436
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Citrus sinensis]
gi|568870034|ref|XP_006488217.1| PREDICTED: DNA-directed
RNA polymerase III subunit rpc1-like isoform X2 [Citrus
sinensis]
Length = 1404
Score = 194 bits (492), Expect = 1e-47
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 5/171 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS ++D G+ SNE+ IT LK II TN+ L+++L A FK L W+ LQ +V +Y
Sbjct: 265 AIRPSVIMD-GSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQY 323
Query: 183 VNSEAPSVLNSKN-----RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V S G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 324 INSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 383
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHL 500
AIP+ MA+ LT+PERVS HNIEKLRQ I NGPDKYPGA I PDGT + L
Sbjct: 384 AIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPDGTARVL 434
>ref|XP_006365152.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X2 [Solanum tuberosum]
Length = 1243
Score = 194 bits (492), Expect = 1e-47
Identities = 103/177 (58%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS VD G SNE+ IT LK II N+ L +++ + P K L LW LQ +V +Y
Sbjct: 258 AIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-SPVKSLNLWIDLQMEVAQY 316
Query: 183 VNSEAPSV-----LNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V G QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 317 INSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 376
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
AIP+LMA+ LT+PERVS HNIEKLRQ + NGP+KYPGA FI PDG+ L + +K
Sbjct: 377 AIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRK 433
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
isoform X1 [Solanum tuberosum]
Length = 1394
Score = 194 bits (492), Expect = 1e-47
Identities = 103/177 (58%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS VD G SNE+ IT LK II N+ L +++ + P K L LW LQ +V +Y
Sbjct: 258 AIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-SPVKSLNLWIDLQMEVAQY 316
Query: 183 VNSEAPSV-----LNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V G QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 317 INSDVRGVPLHMQAQRPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 376
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
AIP+LMA+ LT+PERVS HNIEKLRQ + NGP+KYPGA FI PDG+ L + +K
Sbjct: 377 AIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHPDGSEISLMFTSRK 433
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 194 bits (492), Expect = 1e-47
Identities = 106/171 (61%), Positives = 125/171 (73%), Gaps = 5/171 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS ++D G+ SNE+ IT LK II TN+ L+++L A FK L W+ LQ +V +Y
Sbjct: 280 AIRPSVIMD-GSQSNENDITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQY 338
Query: 183 VNSEAPSVLNSKN-----RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V S G VQRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 339 INSDVRGVPFSMQVARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 398
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHL 500
AIP+ MA+ LT+PERVS HNIEKLRQ I NGPDKYPGA I PDGT + L
Sbjct: 399 AIPIRMARILTYPERVSDHNIEKLRQCIQNGPDKYPGARMIRYPDGTARVL 449
>gb|EMJ09344.1| hypothetical protein PRUPE_ppa024521mg, partial [Prunus persica]
Length = 867
Score = 192 bits (487), Expect = 5e-47
Identities = 106/179 (59%), Positives = 126/179 (70%), Gaps = 5/179 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS +VD S NE+ IT LK II +N++LR DL A KCL WD LQ +V +Y
Sbjct: 268 AIRPSVIVDRSLS-NENDITERLKRIIQSNAILRRDLLEAKSAPKCLASWDILQVEVAQY 326
Query: 183 VNSEAPSVLNSKNR-----GLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V S G VQRLKGK GRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 327 INSDIRGVPFSMQTAKPLSGFVQRLKGKGGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 386
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKKTA 524
+P+ MA+ LT+PERVS HNIEKLRQ + NGPDKYPGA + PDGT L+ V++K A
Sbjct: 387 GVPIKMAQILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRNPDGTEWSLK-VNRKNA 444
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Solanum lycopersicum]
Length = 1390
Score = 191 bits (485), Expect = 9e-47
Identities = 102/177 (57%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS VD G SNE+ IT LK II N+ L +++ + P K L W LQ +V +Y
Sbjct: 258 AIRPSVFVDGGTQSNENDITERLKRIIQANASLHQEMSDS-SPVKSLNQWIDLQMEVAQY 316
Query: 183 VNSEAPSVLNSKN-----RGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ V G QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 317 INSDVRGVPLQMQPPRPLSGFTQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 376
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGTRQHLRYVDKK 518
AIP+LMA+ LT+PERVS HNIEKLRQ + NGP+KYPGA FI PDG L + +K
Sbjct: 377 AIPILMAQILTYPERVSQHNIEKLRQCVRNGPNKYPGAKFIRHPDGNEMSLMFSSRK 433
>gb|EXB53229.1| DNA-directed RNA polymerase III subunit RPC1 [Morus notabilis]
Length = 1179
Score = 189 bits (479), Expect = 4e-46
Identities = 100/167 (59%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
Frame = +3
Query: 3 SIRPSALVDAGASSNEDSITIILKGIINTNSVLREDLEGAVPPFKCLELWDALQNQVVEY 182
+IRPS ++D G+ SNE+ +T LK II N+ LR+DL K LE WDALQ V Y
Sbjct: 30 AIRPSVIMD-GSQSNENDLTERLKQIIQVNATLRQDLSEGSAAAKFLENWDALQAHVALY 88
Query: 183 VNSEA-----PSVLNSKNRGLVQRLKGKQGRFRGNLSGKRTEFTGRTVISPDPNLKITEV 347
+NS+ P + G +QRLKGKQGRFRGNLSGKR E+TGRTVISPDPNLKITEV
Sbjct: 89 INSDVRGIPPPKPGEKQYSGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 148
Query: 348 AIPMLMAKKLTFPERVSAHNIEKLRQRIGNGPDKYPGANFILLPDGT 488
AIP+ MA+ LT+PERVS HNIEKLRQ + NGPDKYPGA + DG+
Sbjct: 149 AIPIRMARILTYPERVSHHNIEKLRQCVSNGPDKYPGARMLRRADGS 195