BLASTX nr result

ID: Zingiber24_contig00042378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042378
         (358 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    64   2e-08
gb|EOY31603.1| RING-H2 finger protein ATL13 [Theobroma cacao]          63   5e-08
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    62   1e-07
ref|XP_004507794.1| PREDICTED: RING-H2 finger protein ATL13-like...    59   9e-07
dbj|BAJ99762.1| predicted protein [Hordeum vulgare subsp. vulgare]     58   2e-06
gb|EMJ23448.1| hypothetical protein PRUPE_ppa004734mg [Prunus pe...    57   2e-06
gb|ACG31172.1| RING-H2 finger protein ATL2C [Zea mays]                 57   3e-06
ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea ma...    57   3e-06
ref|XP_006453487.1| hypothetical protein CICLE_v10008104mg [Citr...    56   6e-06
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    56   6e-06
gb|ESW26818.1| hypothetical protein PHAVU_003G150800g [Phaseolus...    55   1e-05

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 8/110 (7%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEKS------DTSRRAISFRLPL--NWAMTNRLKLKDNASPAATAAS 164
           +ESFS SKIWL+ K+++      D+SRRA S+R P+  + A  + LKLK+ +S      S
Sbjct: 425 RESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAADDLKLKNVSSSTGRTVS 484

Query: 165 EFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFTRTLFWLVGRQNR 314
           E  +  W    SE+  D E          + +      RTL WL+GRQN+
Sbjct: 485 ELEIGRWENGGSELGCD-EEMQSCNSLDSQANPPSFARRTLLWLMGRQNK 533


>gb|EOY31603.1| RING-H2 finger protein ATL13 [Theobroma cacao]
          Length = 497

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 44/117 (37%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEK-----SDTSRRAISFRLPL--NWAMT--------NRLKLKDNAS 143
           KESFS SKIWL+ K++      D+SRRA SFR PL  N A T        + +K+K+   
Sbjct: 372 KESFSISKIWLRGKKEKQNITEDSSRRAFSFRFPLHQNVAATAAAAAADDDSMKVKNGIG 431

Query: 144 PAATAASEFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFTRTLFWLVGRQNR 314
            A    SE +   WG   SE+  D E          +        RTL WL GRQN+
Sbjct: 432 GARDTISEIDSGRWGNGGSELGFD-EENQSCYSLDSQAKTPSFARRTLLWLAGRQNK 487


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 8/110 (7%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEKS------DTSRRAISFRLPL--NWAMTNRLKLKDNASPAATAAS 164
           +ESFS SKIWL+ K+++      D+SRRA S+R P+  + A     KLK+ +S      S
Sbjct: 425 RESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAAXDXKLKNVSSSTGRTVS 484

Query: 165 EFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFTRTLFWLVGRQNR 314
           E  +  W    SE+  D E          + +      RTL WL+GRQN+
Sbjct: 485 ELEIGRWENGGSELGCD-EEMQSCNSLDSQANPPSFARRTLLWLMGRQNK 533


>ref|XP_004507794.1| PREDICTED: RING-H2 finger protein ATL13-like [Cicer arietinum]
          Length = 517

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEKS-------DTSRRAISFRLPLN---WAMTNRLKLKDNASPAATA 158
           KESFS SKIWL+ K+         D+SRRA+SFR PL     + TN LK K+      + 
Sbjct: 395 KESFSVSKIWLRGKKDKSNVGSLVDSSRRAVSFRFPLQRNVGSSTNDLKRKNGRFDTRSN 454

Query: 159 ASEFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFT-RTLFWLVGRQNR 314
            SE     W +N    +   +              A SF  RTL WL G+QN+
Sbjct: 455 VSEMEFGKW-ENGGGSEFGYDEENRSCYSMDSQARAPSFAKRTLLWLTGKQNK 506


>dbj|BAJ99762.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 435

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
 Frame = +3

Query: 9   KESFSASKIWLQ---------AKEKSDTSRRAISFRLP--LNWAMTNRLKLKDNASPAAT 155
           KESFS SKIW++         A     +SRRA SFRLP  L  A ++    K  A   + 
Sbjct: 321 KESFSISKIWMRGGLRRKDSSAAPSGSSSRRASSFRLPTSLQRAASDIGAPKRRADVVSP 380

Query: 156 AA-SEFNVSPWGKNSSE--VDLDIEXXXXXXXXXXRVDEARSFT-RTLFWLVG 302
              SE+NVS W K+ S   VD D+E          R DEA SF  RTL W+ G
Sbjct: 381 VTESEYNVSAWDKSRSGSIVDWDVESGTAAGGLSSRADEASSFARRTLLWIRG 433


>gb|EMJ23448.1| hypothetical protein PRUPE_ppa004734mg [Prunus persica]
          Length = 494

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 9/115 (7%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEK-----SDTSRRAISFRLPLN---WAMTNRLKLKDNASPAATAAS 164
           +ESFS SKIWL+ K++      D+SR A SFR P++    A    +K K+  S +    S
Sbjct: 373 RESFSISKIWLRGKKEKPNRAGDSSRLASSFRFPVHRSGVAAGEEVKAKNVESGSRRTIS 432

Query: 165 EFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFT-RTLFWLVGRQNRAGNH 326
           E ++  W    SE+  D E                SF  RTL WLVGRQ     H
Sbjct: 433 EIDIGRWENGGSELGCDEENVSVSCNSLDSQANPPSFARRTLLWLVGRQQNKVVH 487


>gb|ACG31172.1| RING-H2 finger protein ATL2C [Zea mays]
          Length = 481

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEK-------SDTSRRAISFRLPL-------NWAMTNRLKLKDNASP 146
           +ESFS SKIW+++  +       + TSRRA SFRL         +   T   +  D  SP
Sbjct: 367 RESFSVSKIWMRSGPRRKDVPSGATTSRRASSFRLSSALQRTASDVGATTAKRRADVVSP 426

Query: 147 AATAASEFNVSPWGKNSSE--VDLDIEXXXXXXXXXXRVDEARSFT-RTLFWLVG 302
                SE+NVS W K++S   VD D+E          R DEA SF  RTL W+ G
Sbjct: 427 VTE--SEYNVSAWDKSASGSVVDWDVESAGGGHGLSSRADEAPSFARRTLLWIRG 479


>ref|NP_001140996.1| uncharacterized protein LOC100273075 [Zea mays]
           gi|194702090|gb|ACF85129.1| unknown [Zea mays]
          Length = 483

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEK-------SDTSRRAISFRLPL-------NWAMTNRLKLKDNASP 146
           +ESFS SKIW+++  +       + TSRRA SFRL         +   T   +  D  SP
Sbjct: 369 RESFSVSKIWMRSGPRRKDVPSGATTSRRASSFRLSSALQRTASDVGATTAKRRADVVSP 428

Query: 147 AATAASEFNVSPWGKNSSE--VDLDIEXXXXXXXXXXRVDEARSFT-RTLFWLVG 302
                SE+NVS W K++S   VD D+E          R DEA SF  RTL W+ G
Sbjct: 429 VTE--SEYNVSAWDKSASGSVVDWDVESAGGGHGLSSRADEAPSFARRTLLWIRG 481


>ref|XP_006453487.1| hypothetical protein CICLE_v10008104mg [Citrus clementina]
           gi|568840287|ref|XP_006474101.1| PREDICTED: RING-H2
           finger protein ATL13-like [Citrus sinensis]
           gi|557556713|gb|ESR66727.1| hypothetical protein
           CICLE_v10008104mg [Citrus clementina]
          Length = 494

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/111 (36%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
 Frame = +3

Query: 12  ESFSASKIWLQAKEK-----SDTSRRAISFRLPLNWAMT-----NRLKLKDNASPAATAA 161
           +SFS SKIWLQ K++      D SRRA SFR P+N           LK K+         
Sbjct: 375 DSFSISKIWLQGKKEKHNLPEDPSRRAFSFRFPVNRNAAAVGDDRDLKSKNGNVGTRRTI 434

Query: 162 SEFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFTRTLFWLVGRQNR 314
           SE  +S W    SE+  D E          +        RTL WL+GRQN+
Sbjct: 435 SEIGISRWEYGRSELGCD-EENQSCSRSDLQTKTPSFARRTLHWLMGRQNK 484


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 44/113 (38%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
 Frame = +3

Query: 9   KESFSASKIWLQA-KEKS----DTSRRAISFRLPLNWAMT-----NRLKLKD-NASPAAT 155
           +ESFS SKIWL+  KEK     D+SRRA SFR P+N  +      + LK+K+ N S A  
Sbjct: 382 RESFSISKIWLRGEKEKQKPPGDSSRRAFSFRFPVNKNVVPGDEDDNLKVKNGNGSGARR 441

Query: 156 AASEFNVSPWGKNSSEVDLDIEXXXXXXXXXXRVDEARSFTRTLFWLVGRQNR 314
             SE  +  W +N    D + +          R        RTL WLVGRQN+
Sbjct: 442 TNSEIGIGRW-ENRFSFDEENQICNAKTPSFAR--------RTLLWLVGRQNK 485


>gb|ESW26818.1| hypothetical protein PHAVU_003G150800g [Phaseolus vulgaris]
          Length = 505

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
 Frame = +3

Query: 9   KESFSASKIWLQAKEK-----SDTSRRAISFRLPLNWAMT--------NRLKLKDNASPA 149
           KESFS SKIWL+ K+      +D+SRRA+SFR P   +          + LK K++    
Sbjct: 381 KESFSISKIWLRGKKDKPNAVADSSRRAVSFRFPAKSSAVAASGSGDDDDLKGKNSKFDT 440

Query: 150 ATAASEFNVSPW-GKNSSEVDLDIEXXXXXXXXXXRVDEARSFTRTLFWLV-GRQNR 314
           ++  SE ++  W     S+ DLD E          +        RTL WL  GRQN+
Sbjct: 441 SSTISEMDIGKWENGGGSQFDLDEENQSCYSMDSSQARAPSFARRTLLWLTGGRQNK 497


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