BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042306
         (328 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Gr...    97   2e-18
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S...    97   2e-18
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi...    97   2e-18
ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group] g...    97   2e-18
gb|AFW59092.1| putative RING zinc finger domain superfamily prot...    97   3e-18
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   4e-18
ref|NP_001137007.1| uncharacterized protein LOC100217173 [Zea ma...    96   4e-18
ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|1...    96   4e-18
ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    96   7e-18
ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    95   1e-17
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1...    94   2e-17
tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil...    93   3e-17
ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    90   4e-16
ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group] g...    90   4e-16
ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea ma...    89   5e-16
ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    89   6e-16
dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare]     89   8e-16
ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...    86   7e-15
tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamil...    84   3e-14
dbj|BAJ86692.1| predicted protein [Hordeum vulgare subsp. vulgare]     84   3e-14

>dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Group]
          Length = 502

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 51/110 (46%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +PSC
Sbjct: 257 ASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSC 316

Query: 134 PLCRATVLLPPTP--------PSRAALPVKMSTTASQGGSSLRDESWSIS 9
           PLCRATV LP  P         S AA    + + +S    S R E  SIS
Sbjct: 317 PLCRATVSLPHPPLPTAAAAAASNAAQQDPLDSRSSNNSRSFRVEIGSIS 366


>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
           gi|241934288|gb|EES07433.1| hypothetical protein
           SORBIDRAFT_04g031430 [Sorghum bicolor]
          Length = 400

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 52/114 (45%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSC
Sbjct: 130 ASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSC 189

Query: 134 PLCRATVLL--------PPTPPSRAALPV----KMSTTASQGGSSLRDESWSIS 9
           PLCRA V L        PP PP  AA P      + +  S    S R E  S+S
Sbjct: 190 PLCRAAVSLPHPPLPTAPPPPPQPAAGPAAQQEPLDSRVSSNSRSFRVEIGSVS 243


>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
          Length = 267

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 51/110 (46%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +PSC
Sbjct: 22  ASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSC 81

Query: 134 PLCRATVLLPPTP--------PSRAALPVKMSTTASQGGSSLRDESWSIS 9
           PLCRATV LP  P         S AA    + + +S    S R E  SIS
Sbjct: 82  PLCRATVSLPHPPLPTAAAAAASNAAQQDPLDSRSSNNSRSFRVEIGSIS 131


>ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group]
           gi|113537311|dbj|BAF09694.1| Os02g0688800 [Oryza sativa
           Japonica Group] gi|125583300|gb|EAZ24231.1| hypothetical
           protein OsJ_07979 [Oryza sativa Japonica Group]
          Length = 373

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 51/110 (46%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +PSC
Sbjct: 128 ASLPLFTMASALAALPKSSPDCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSC 187

Query: 134 PLCRATVLLPPTP--------PSRAALPVKMSTTASQGGSSLRDESWSIS 9
           PLCRATV LP  P         S AA    + + +S    S R E  SIS
Sbjct: 188 PLCRATVSLPHPPLPTAAAAAASNAAQQDPLDSRSSNNSRSFRVEIGSIS 237


>gb|AFW59092.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 372

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 23/126 (18%)
 Frame = -3

Query: 320 IDSQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSP 141
           IDS LPLF            SPDC VCL PF PD ++R LPAC HAFHA CVD W++ +P
Sbjct: 121 IDS-LPLFTMASALASLPGSSPDCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAP 179

Query: 140 SCPLCRATVLL-----------------PPTPPSRA------ALPVKMSTTASQGGSSLR 30
           SCPLCR+ V L                 PPTP  RA      +  V+M T +++GG    
Sbjct: 180 SCPLCRSAVALPPHPSRSDMHAAGAAQQPPTPTPRARGRSGPSFLVEMGTVSNRGGGQRN 239

Query: 29  DESWSI 12
             ++S+
Sbjct: 240 SRTYSL 245


>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 47/98 (47%), Positives = 56/98 (57%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF+PD ++R LPAC HAFHA CVD W++N+PSC
Sbjct: 130 ASLPLFTMASALAALPKSSPDCAVCLSPFVPDAELRLLPACRHAFHAACVDAWLRNTPSC 189

Query: 134 PLCRATVLLPPTPPSRAALPVKMSTTASQGGSSLRDES 21
           PLCRA + LP  P     LP   +  A Q     R  S
Sbjct: 190 PLCRAAISLPHPP-----LPAAYTGAAQQEPLDARSSS 222


>ref|NP_001137007.1| uncharacterized protein LOC100217173 [Zea mays]
           gi|194697958|gb|ACF83063.1| unknown [Zea mays]
          Length = 367

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 45/96 (46%), Positives = 59/96 (61%), Gaps = 14/96 (14%)
 Frame = -3

Query: 257 PDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLPPTPPSRAAL 78
           PDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSCPLCR+ V LPP  PS+A  
Sbjct: 146 PDCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAPSCPLCRSAVALPP-HPSQAQQ 204

Query: 77  P--------------VKMSTTASQGGSSLRDESWSI 12
           P              V+M T +++GG      ++S+
Sbjct: 205 PPTPRARGQSGPSFLVEMGTVSTRGGGQRNSRTYSL 240


>ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1|
           unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown
           [Zea mays] gi|413938299|gb|AFW72850.1| putative RING
           zinc finger domain superfamily protein [Zea mays]
          Length = 378

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 52/110 (47%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF PD D+R LPAC HAFHA CVD W++ +PSC
Sbjct: 123 ASLPLFTMASALAALPKSSPDCAVCLSPFSPDADLRLLPACRHAFHAACVDAWLRTTPSC 182

Query: 134 PLCRATVLLP----PTPPSRAALPVKMS----TTASQGGSSLRDESWSIS 9
           PLCRA V LP    PT P  AA   + +     ++S    S R E  S+S
Sbjct: 183 PLCRAAVSLPHPPLPTAPPLAAGSAQEALDSRVSSSSNSRSFRVEIGSVS 232


>ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 402

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 49/110 (44%), Positives = 60/110 (54%), Gaps = 7/110 (6%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF PD ++R LPAC HAFHA CVD W++ +PSC
Sbjct: 134 ASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSC 193

Query: 134 PLCRATVLLPPTPPSRAALPVKMSTTASQ-------GGSSLRDESWSISL 6
           PLCRA V LP  P   AA     +   +Q       GGSS    S+ + +
Sbjct: 194 PLCRAAVSLPHPPLPTAAPAAAAAGPGAQEPLDSRVGGSSNNSRSFRVEI 243


>ref|XP_003572836.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Brachypodium
           distachyon]
          Length = 443

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 51/110 (46%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PFL D ++R LPAC HAFHA CVD W++ +PSC
Sbjct: 191 ASLPLFTMASALAALPKSSPDCAVCLSPFLADAELRLLPACRHAFHAACVDAWLRTTPSC 250

Query: 134 PLCRATVLL--PPTPPSRAA------LPVKMSTTASQGGSSLRDESWSIS 9
           PLCRA + L  PP P + AA      L   + + +S    S R E  SIS
Sbjct: 251 PLCRAAISLPHPPLPTAAAAAGAGAGLQEPLDSRSSTNSRSFRVEIGSIS 300


>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
           RING-H2 finger protein ATL3J [Zea mays]
          Length = 397

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 51/110 (46%), Positives = 59/110 (53%), Gaps = 18/110 (16%)
 Frame = -3

Query: 320 IDSQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSP 141
           IDS LPLF            SPDC VCL PF PD D+R LPAC HAFHA CVD W++ +P
Sbjct: 123 IDS-LPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTP 181

Query: 140 SCPLCRATVLLP------------------PTPPSRAALPVKMSTTASQG 45
           SCPLCRA V LP                  P P    +  V+M T +S+G
Sbjct: 182 SCPLCRAAVALPHPSLSGMLAAAQAQRPARPGPGPGPSFLVEMGTVSSRG 231


>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 397

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 44/72 (61%), Positives = 48/72 (66%)
 Frame = -3

Query: 320 IDSQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSP 141
           IDS LPLF            SPDC VCL PF PD D+R LPAC HAFHA CVD W++ +P
Sbjct: 125 IDS-LPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTP 183

Query: 140 SCPLCRATVLLP 105
           SCPLCRA V LP
Sbjct: 184 SCPLCRAAVALP 195


>ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 380

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 51/108 (47%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = -3

Query: 320 IDSQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSP 141
           IDS LPLF            SPDC VCL PF PD ++R LPAC HAFHA CVD W++ +P
Sbjct: 119 IDS-LPLFTMASALAALPKSSPDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRTTP 177

Query: 140 SCPLCRATV--LLPPTPPSRAALPVKMSTTASQG--GSSLRDESWSIS 9
           SCPLCRA V  L P    +  A   +    A +G  GSS   E  ++S
Sbjct: 178 SCPLCRAAVAPLHPSLTAAMLAAAQQQQQPAQRGRPGSSFLVEIGTVS 225


>ref|NP_001053687.1| Os04g0586700 [Oryza sativa Japonica Group]
           gi|32488757|emb|CAE04310.1| OSJNBb0016D16.1 [Oryza
           sativa Japonica Group] gi|38344287|emb|CAE03770.2|
           OSJNBa0013K16.19 [Oryza sativa Japonica Group]
           gi|113565258|dbj|BAF15601.1| Os04g0586700 [Oryza sativa
           Japonica Group] gi|125549503|gb|EAY95325.1| hypothetical
           protein OsI_17152 [Oryza sativa Indica Group]
           gi|215693347|dbj|BAG88729.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 359

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 48/108 (44%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
 Frame = -3

Query: 308 LPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPL 129
           LPLF            SPDC VCL PF  D ++R LPAC HAFHA CVD W++ +PSCPL
Sbjct: 109 LPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLPACRHAFHAACVDAWLRTTPSCPL 168

Query: 128 CRATVLLP------------PTPPSRAALPVKMSTTASQGGSSLRDES 21
           CRATV LP            P PP   +     S     G  S R  S
Sbjct: 169 CRATVTLPHPSISAILAAEQPPPPEPRSRDRSRSFRVEMGSVSNRSAS 216


>ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea mays]
           gi|194702970|gb|ACF85569.1| unknown [Zea mays]
          Length = 265

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 36/51 (70%), Positives = 40/51 (78%)
 Frame = -3

Query: 257 PDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPLCRATVLLP 105
           PDC VCL PF PD D+R LPAC HAFHA CVD W++ +PSCPLCRA V LP
Sbjct: 13  PDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVALP 63


>ref|XP_006652708.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Oryza
           brachyantha]
          Length = 360

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 47/108 (43%), Positives = 54/108 (50%), Gaps = 12/108 (11%)
 Frame = -3

Query: 308 LPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCPL 129
           LPLF            SPDC VCL PF  D ++R LPAC HAFHA CVD W++ +PSCPL
Sbjct: 110 LPLFTMASSLAALPKSSPDCAVCLSPFTLDAELRLLPACRHAFHAACVDAWLRTTPSCPL 169

Query: 128 CRATVLLP------------PTPPSRAALPVKMSTTASQGGSSLRDES 21
           CRATV +P            P PP   +     S     G  S R  S
Sbjct: 170 CRATVSIPHPSISAILASEHPPPPEPRSRDRSRSFRVEMGSVSNRSSS 217


>dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 342

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 51/121 (42%), Positives = 62/121 (51%), Gaps = 27/121 (22%)
 Frame = -3

Query: 320 IDSQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSP 141
           IDS LP F            SPDC VCL PF P+ ++R LPAC HAFHA CVD W++ +P
Sbjct: 76  IDS-LPRFTMASALAALPRSSPDCAVCLSPFRPEAELRLLPACRHAFHAVCVDAWLRTTP 134

Query: 140 SCPLCRATVL----------------LPPTPPSRAA-----------LPVKMSTTASQGG 42
           +CPLCRATV                  PP PP  AA             V+M + +S+GG
Sbjct: 135 TCPLCRATVAPPHPSIAALLAAQQQQQPPPPPEPAAARGRDRSSRFHFRVEMGSVSSRGG 194

Query: 41  S 39
           S
Sbjct: 195 S 195


>ref|XP_004964165.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
          Length = 256

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/103 (41%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           + LPLF            SPDC VCL PF PD  +R LP C HAFHA C+D W++ +P C
Sbjct: 6   ASLPLFTMASALAALPKNSPDCAVCLSPFEPDAGLRLLPTCRHAFHAACIDAWLRTNPVC 65

Query: 134 PLCRATVLLP-PTPPSRAALPVKMSTTASQGGSSLRDESWSIS 9
           P+CR+ V  P P  P+ AA   +    +     S R E  S+S
Sbjct: 66  PICRSAVSFPLPPLPAPAAAAGQEPLGSRTSSRSFRVELGSVS 108


>tpg|DAA46363.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 379

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/89 (43%), Positives = 55/89 (61%)
 Frame = -3

Query: 314 SQLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSC 135
           ++LPLF            S DC VC   F  D+++R LPAC HAFH+ CVD W++ +PSC
Sbjct: 134 ARLPLFTLSSSLASVPKSSRDCAVCQSAFRDDDELRLLPACRHAFHSRCVDPWLRGNPSC 193

Query: 134 PLCRATVLLPPTPPSRAALPVKMSTTASQ 48
           PLCRA++ L P PP    L V++ + +S+
Sbjct: 194 PLCRASIAL-PCPPLTDLLRVELGSVSSR 221


>dbj|BAJ86692.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 367

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 41/101 (40%), Positives = 60/101 (59%)
 Frame = -3

Query: 311 QLPLFEXXXXXXXXXXXSPDCVVCLLPFLPDEDIRRLPACGHAFHAECVDTWIQNSPSCP 132
           +LPLF            S DC VC   F  D+++R LPAC HAFH+ CVD W++ +PSCP
Sbjct: 125 RLPLFTLASSLAALPRSSRDCAVCQCVFCGDDELRLLPACRHAFHSGCVDPWLRANPSCP 184

Query: 131 LCRATVLLPPTPPSRAALPVKMSTTASQGGSSLRDESWSIS 9
           LCRA++ L P PP    L V++ + +S+  +S    S +++
Sbjct: 185 LCRASIAL-PYPPLPELLRVELGSVSSRRSTSSSSSSAAVA 224