BLASTX nr result

ID: Zingiber24_contig00042272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042272
         (521 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [...    64   2e-08
emb|CBI21907.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]    64   2e-08
gb|EEC70289.1| hypothetical protein OsI_01118 [Oryza sativa Indi...    58   1e-06
ref|XP_003566276.1| PREDICTED: zinc finger protein MAGPIE-like [...    57   3e-06

>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
          Length = 450

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 28/116 (24%)
 Frame = +2

Query: 5   PAPDMSASALLQKAAQVGVTSSMGFAGSFEPSPYRCQST--ADGSKFDGV---------- 148
           P  +MSA+ALLQKAAQ+G TS+  F GSF     +C S+   DG+KF G+          
Sbjct: 340 PLGNMSATALLQKAAQMGATSADPFLGSF---GLKCDSSLVQDGNKFCGLYTANQLPTND 396

Query: 149 ------LFSQNHASML---------KDFLGGETRDFLGVGVGLQSLCH-SSVDGWI 268
                 L + N   M           D  GG+TRDFLGVGV  Q++CH SS++GW+
Sbjct: 397 MENPKDLSTFNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGV--QTICHPSSINGWM 450


>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 28/116 (24%)
 Frame = +2

Query: 5   PAPDMSASALLQKAAQVGVTSSMGFAGSFEPSPYRCQST--ADGSKFDGV---------- 148
           P  +MSA+ALLQKAAQ+G TS+  F GSF     +C S+   DG+KF G+          
Sbjct: 317 PLGNMSATALLQKAAQMGATSADPFLGSF---GLKCDSSLVQDGNKFCGLYTANQLPTND 373

Query: 149 ------LFSQNHASML---------KDFLGGETRDFLGVGVGLQSLCH-SSVDGWI 268
                 L + N   M           D  GG+TRDFLGVGV  Q++CH SS++GW+
Sbjct: 374 MENPKDLSTFNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGV--QTICHPSSINGWM 427


>emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]
          Length = 403

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 28/116 (24%)
 Frame = +2

Query: 5   PAPDMSASALLQKAAQVGVTSSMGFAGSFEPSPYRCQST--ADGSKFDGV---------- 148
           P  +MSA+ALLQKAAQ+G TS+  F GSF     +C S+   DG+KF G+          
Sbjct: 293 PLGNMSATALLQKAAQMGATSADPFLGSF---GLKCDSSLVQDGNKFCGLYTANQLPTND 349

Query: 149 ------LFSQNHASML---------KDFLGGETRDFLGVGVGLQSLCH-SSVDGWI 268
                 L + N   M           D  GG+TRDFLGVGV  Q++CH SS++GW+
Sbjct: 350 MENPKDLSTFNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGV--QTICHPSSINGWM 403


>gb|EEC70289.1| hypothetical protein OsI_01118 [Oryza sativa Indica Group]
          Length = 495

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 53/130 (40%), Positives = 62/130 (47%), Gaps = 41/130 (31%)
 Frame = +2

Query: 2   PPAP-DMSASALLQKAAQVGV---TSSMGFAGSFEPSPY--RCQSTADG-SKFDG----- 145
           P AP DMSA+ALLQKAAQ+G    T++M     FEP+       S AD   KFDG     
Sbjct: 368 PAAPTDMSATALLQKAAQIGAVTSTAAMPLVSPFEPTKPGGATASPADECGKFDGAALFA 427

Query: 146 --------------------------VLFSQNHASMLKDFLG---GETRDFLGVGVGLQS 238
                                     VL +  H + LKD  G    ETRDFLGVGV  Q+
Sbjct: 428 AASHHNANLGGAMSELMAAAGNVPYDVLSAVRHHAGLKDAGGVGREETRDFLGVGV--QA 485

Query: 239 LCHSSVDGWI 268
           LC SS+ GWI
Sbjct: 486 LCSSSIHGWI 495


>ref|XP_003566276.1| PREDICTED: zinc finger protein MAGPIE-like [Brachypodium
           distachyon]
          Length = 411

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 47/114 (41%), Positives = 58/114 (50%), Gaps = 29/114 (25%)
 Frame = +2

Query: 14  DMSASALLQKAAQVG-VTSSMGF---AGSFEP------------------------SPYR 109
           DMSA+ALLQKAAQ+G VTS+       G FEP                        S   
Sbjct: 301 DMSATALLQKAAQIGAVTSNTSMPLVEGLFEPVKSTRAPVEETTLFGASHHSANNGSSAM 360

Query: 110 CQSTADGSKFDGVLFSQNHASMLKDFLG-GETRDFLGVGVGLQSLCHSSVDGWI 268
            + TA  + +D V  +  H   LKD +G  ETRDFL  GVG+Q+LC SS+ GWI
Sbjct: 361 SELTAANTGYD-VFGAARHGGGLKDAVGREETRDFL--GVGMQALCSSSIHGWI 411


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