BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00042111
         (522 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   149   5e-34
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660...   147   2e-33
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665...   147   2e-33
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   146   3e-33
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...   144   1e-32
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663...   140   1e-31
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A...   140   1e-31
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   138   7e-31
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661...   136   3e-30
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   135   6e-30
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   134   1e-29
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                134   1e-29
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           134   1e-29
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   132   6e-29
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       131   8e-29
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   129   3e-28
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   129   3e-28
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   129   3e-28
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             127   1e-27
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   127   2e-27

>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  149 bits (375), Expect = 5e-34
 Identities = 67/169 (39%), Positives = 111/169 (65%)
 Frame = -2

Query: 521 EASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPL 342
           +  ++  F+YH +C ++++T+L +ADDLLLF+R D+ S+ +++     F    GL  NP 
Sbjct: 493 QLDKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPS 552

Query: 341 KSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVIS 162
           K N+Y   ++  ++ +LL I+GF++G  PFRYLGIPL++++L I +Y  L++ I  ++  
Sbjct: 553 KCNIYCGSVDINVKEQLLLISGFKEGKMPFRYLGIPLSSKKLNIKHYQVLIDKIVGRITH 612

Query: 161 WPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW 15
           W    LS+AGR++LI+SV+     FW+  LP+P  VI +I  I RSF+W
Sbjct: 613 WSAGLLSYAGRVQLIQSVIFATINFWMQCLPLPKFVIMRINAICRSFLW 661


>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
          Length = 303

 Score =  147 bits (370), Expect = 2e-33
 Identities = 65/162 (40%), Positives = 103/162 (63%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F +HP CA ++L+HLA+ DD++L +R D+ S++ +   L  F    GL  +  KS++Y +
Sbjct: 10  FKFHPNCAGIQLSHLAFVDDIMLLSRGDIPSMSTMFAKLQHFCRVLGLSISSDKSSIYSS 69

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
            +       +  +TGF  G FPFRYLG+PL + RL + +Y  LL  IT  +  W + +LS
Sbjct: 70  SIRTHELSHIQQLTGFSLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLS 129

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW 15
           +AG++ELIR+V+QG+  FW+ I P+P  V+D+I    R+F+W
Sbjct: 130 YAGKLELIRAVIQGIVNFWIGIFPLPQSVLDRINASCRNFLW 171


>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
          Length = 506

 Score =  147 bits (370), Expect = 2e-33
 Identities = 64/163 (39%), Positives = 105/163 (64%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F+YHP+C ++++T+L +ADDLLLF+R D  S+ ++M     F    GL  NP K +L  A
Sbjct: 58  FNYHPKCDKLKITNLCFADDLLLFSRGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCA 117

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
           G++   + E+L ++GFQ+G  PF+YLG+P+ +++L   +Y  L++ I  K+  W    LS
Sbjct: 118 GIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLS 177

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
           +AGR++L+ SV+  +  +WL+  P P  V+ KI  I R F+W+
Sbjct: 178 YAGRLQLVNSVMFALTNYWLNCFPFPKSVLQKIEAICRIFLWT 220


>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
           lycopersicum]
          Length = 717

 Score =  146 bits (368), Expect = 3e-33
 Identities = 63/163 (38%), Positives = 110/163 (67%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F YHP+ A++++THL +ADDLLLF+R D++S+  +  C T+F   +GL+AN  KS++Y  
Sbjct: 480 FKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCG 539

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
           G++ ++R +++   G+     PF+YLG+PL++++L    +  L+E +  ++ SW    LS
Sbjct: 540 GVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLS 599

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
           +AGR +L+++VL GV+  W  +  IP+ +I  I G+ RS++WS
Sbjct: 600 YAGRAQLVKTVLFGVQALWAQLFIIPAKIIKLIEGLCRSYLWS 642


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score =  144 bits (363), Expect = 1e-32
 Identities = 66/162 (40%), Positives = 101/162 (62%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F +HP CA ++L HLA+ADD++  +R D+ S++ +   L  F   +GL  N  KS +Y A
Sbjct: 10  FKFHPNCAGIQLFHLAFADDIMFLSRGDIPSVSTMFAKLQHFCRVSGLSINSDKSAIYSA 69

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
           G+       +  +TGF  G FPFRYLG+PL + RL + +Y  LL  IT  +  W + +LS
Sbjct: 70  GIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYAPLLSKITGLIQGWSRKSLS 129

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVW 15
           +AG++ELIR+V+QG+  FW+ I P+   V+D+I     +F+W
Sbjct: 130 YAGKLELIRAVIQGIVNFWMKIFPLSQSVLDRINASCCNFLW 171


>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
          Length = 514

 Score =  140 bits (354), Expect = 1e-31
 Identities = 64/167 (38%), Positives = 101/167 (60%)
 Frame = -2

Query: 512 RLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSN 333
           R   F++H +C  + +THL++ADD+ L  R D  S+ +I+   + F    GL+ NP K  
Sbjct: 157 RNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKSIKMIIKAFSFFSKSTGLQINPAKCK 216

Query: 332 LYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPK 153
           ++  G+       +  ITGF++G  P RYLG+PL+ ++L + +Y  L+E I  K+  W  
Sbjct: 217 VFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLSCKKLNVHHYLPLVEKIVGKIRHWSS 276

Query: 152 HTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
             LS AGRI+L+RS++  +  +W+S+ P+P  VI KI  I RSF+WS
Sbjct: 277 KLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQKIDSICRSFIWS 323


>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 316

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/163 (39%), Positives = 101/163 (61%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F +HP CA ++L+HLA+ADD++L +R D+  ++ +   L  F   +GL  +  KS +Y A
Sbjct: 43  FKFHPNCAGIQLSHLAFADDIMLLSRGDIPYMSTMFAKLQHFCRVSGLSISSDKSAIYSA 102

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
           G+       +  +TGF  G FPFRYLG PL + RL + +Y  LL  I   +  W K +LS
Sbjct: 103 GIRPYELSHIQQLTGFSLGGFPFRYLGAPLLSSRLNVCHYAPLLYKIVGLIQGWNKKSLS 162

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
           + G++ELI++V+QG+  FW+ I P+P  V+D+I     +F+WS
Sbjct: 163 YVGKLELIKAVIQGIMNFWMRIFPLPQSVLDRINASCCNFLWS 205


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  138 bits (348), Expect = 7e-31
 Identities = 65/165 (39%), Positives = 101/165 (61%)
 Frame = -2

Query: 500  FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
            F++HP+C  + +THL +ADDLL+F RAD SSL+ +      F   +GL A+  KSN+Y  
Sbjct: 672  FNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFC 731

Query: 320  GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
            G++++   EL      Q G  PFRYLG+PL +++L  A    L+E IT +  +W    LS
Sbjct: 732  GVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLS 791

Query: 140  HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWSTK 6
            +AGR++LI+S+L  ++ +W  I P+   VI  +  + R F+W+ K
Sbjct: 792  YAGRLQLIKSILSSMQNYWAHIFPLSKKVIQAVEKVCRKFLWTGK 836


>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
          Length = 947

 Score =  136 bits (342), Expect = 3e-30
 Identities = 59/163 (36%), Positives = 99/163 (60%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F++H +C ++ +THL +ADD+LLF R DV S+ +++  +  F    GL  NP K  +Y  
Sbjct: 500 FNHHAKCEKLGITHLTFADDVLLFCRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFG 559

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
           G++   + ++  I+ +++G  P RYLG+PL +++L I  Y  L++ IT ++  W    L+
Sbjct: 560 GVDGTTKNKIQQISSYEEGQLPVRYLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLN 619

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
             GR++++   +  +  FW+  LPIP  VI KI  + RSFVWS
Sbjct: 620 MTGRVQMVNCTITAIVQFWMQCLPIPMSVIKKIDSMCRSFVWS 662


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  135 bits (340), Expect = 6e-30
 Identities = 62/163 (38%), Positives = 101/163 (61%)
 Frame = -2

Query: 500  FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
            F++HP+C  ++LTHL +ADDLL+FARAD SS++ IM     F   +GL+A+  KS +Y  
Sbjct: 675  FNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEKSCIYFG 734

Query: 320  GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
            G+  +   +L        G  PFRYLG+PLA+++L  +    L++ IT +   W  H LS
Sbjct: 735  GVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLS 794

Query: 140  HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            +AGR++L++++L  ++ +W  I P+P  +I  +    R F+W+
Sbjct: 795  YAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKFLWT 837


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  134 bits (337), Expect = 1e-29
 Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
 Frame = -2

Query: 515  SRLDG--FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPL 342
            SR D    HYHP+  ++ ++HL +ADD+++F     SS++ I   L DF D +GL+ N  
Sbjct: 534  SRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKD 593

Query: 341  KSNLYVAGMEEQLRGELLHIT----GFQQGVFPFRYLGIPLATERLRIANYGSLLEAITK 174
            KS L+ AG++   R     IT    GF  G FP RYLG+PL   +LRIA+YG LLE ++ 
Sbjct: 594  KSQLFQAGLDLSER-----ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSA 648

Query: 173  KVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            ++ SW    LS AGR +LI SV+ G+  FW+S   +P G I KI  +   F+W+
Sbjct: 649  RLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWA 702


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  134 bits (337), Expect = 1e-29
 Identities = 63/161 (39%), Positives = 98/161 (60%)
 Frame = -2

Query: 494 YHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGM 315
           YHP+C ++ LTHL +ADDL++F      S+  ++    +F  K+GL  +  KS LY+AG+
Sbjct: 262 YHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGV 321

Query: 314 EEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHA 135
            E  R  +L    F  G  P RYLG+PL T+++  A+Y  LL+ +  K+ SW   +LS+A
Sbjct: 322 SELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYA 381

Query: 134 GRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
           GR+ LI SV+  +  FW+S   +P+G I +I  +  +F+WS
Sbjct: 382 GRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWS 422


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  134 bits (337), Expect = 1e-29
 Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 6/174 (3%)
 Frame = -2

Query: 515  SRLDG--FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPL 342
            SR D    HYHP+  ++ ++HL +ADD+++F     SS++ I   L DF D +GL+ N  
Sbjct: 534  SRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKD 593

Query: 341  KSNLYVAGMEEQLRGELLHIT----GFQQGVFPFRYLGIPLATERLRIANYGSLLEAITK 174
            KS L+ AG++   R     IT    GF  G FP RYLG+PL   +LRIA+YG LLE ++ 
Sbjct: 594  KSQLFQAGLDLSER-----ITSAAYGFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSA 648

Query: 173  KVISWPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            ++ SW    LS AGR +LI SV+ G+  FW+S   +P G I KI  +   F+W+
Sbjct: 649  RLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWA 702


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  132 bits (331), Expect = 6e-29
 Identities = 63/161 (39%), Positives = 96/161 (59%)
 Frame = -2

Query: 494  YHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGM 315
            YHP+C ++ LTHL +ADDL++F      S+  ++    DF  K+GL  +  KS LY+A +
Sbjct: 831  YHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEV 890

Query: 314  EEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHA 135
             E  R  +L    F  G  P RYLG PL T+++  A+Y  LL+ +  K+ SW   +LS+A
Sbjct: 891  SELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYA 950

Query: 134  GRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            GR+ LI SV+  +  FW+S   +P+G I +I  +  +F+WS
Sbjct: 951  GRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSAFLWS 991


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  131 bits (330), Expect = 8e-29
 Identities = 70/162 (43%), Positives = 95/162 (58%)
 Frame = -2

Query: 497  HYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAG 318
            HYHP+ + + ++HL +ADD+++F      SL+ I   L DF   +GL+ N  KS+LY+AG
Sbjct: 682  HYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAG 741

Query: 317  MEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSH 138
            +  QL        GF  G  P RYLG+PL   +LRIA Y  LLE IT +  SW    LS 
Sbjct: 742  LN-QLESNANAAYGFPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKITARFRSWVNKCLSF 800

Query: 137  AGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            AGRI+LI SV+ G   FW+S   +P G I +I  +   F+WS
Sbjct: 801  AGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWS 842


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score =  129 bits (325), Expect = 3e-28
 Identities = 62/163 (38%), Positives = 98/163 (60%)
 Frame = -2

Query: 500 FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
           F YH RC ++ L+HL +ADDLL+F   D +S+  +    ++F   + L+AN  +S +++A
Sbjct: 509 FRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLA 568

Query: 320 GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
           G++      +L +T F  G  P RYLGIPL T +LR+ +   LL+ I  ++ SW    LS
Sbjct: 569 GVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLS 628

Query: 140 HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            AGR++LI+SVL  ++ +W S L +P  V+  I    R F+W+
Sbjct: 629 FAGRLQLIQSVLSSIQVYWASHLILPKKVLKDIEKRLRCFLWA 671


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  129 bits (325), Expect = 3e-28
 Identities = 66/163 (40%), Positives = 100/163 (61%)
 Frame = -2

Query: 494  YHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGM 315
            YHP+ +++E++HL +ADD+++F     SSL+ I+  L DF   +GL  N  K+ LY AG+
Sbjct: 580  YHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGL 639

Query: 314  EEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHA 135
              Q   + +   GF+ G  P RYLG+PL + +L IA Y  L+E IT +  SW    LS A
Sbjct: 640  S-QSESDSMASYGFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFA 698

Query: 134  GRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWSTK 6
            GR++L+ SV+ G+  FW+S   +P G I KI  +   F+WS++
Sbjct: 699  GRVQLLASVISGIVNFWISSFILPLGCIKKIESLCSRFLWSSR 741


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  129 bits (325), Expect = 3e-28
 Identities = 60/161 (37%), Positives = 99/161 (61%)
 Frame = -2

Query: 494  YHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVAGM 315
            YHP+C ++ LTHL +ADDL++F      S+  ++    +F  ++GL+ +  KS +Y+AG+
Sbjct: 986  YHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGV 1045

Query: 314  EEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLSHA 135
                R + L    F  G  P RYLG+PL T+++  A+Y  L+EA+  K+ SW   +LS+A
Sbjct: 1046 SASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYA 1105

Query: 134  GRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            GR+ L+ SV+  +  FW+S   +P+G I +I  +  +F+WS
Sbjct: 1106 GRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSAFLWS 1146


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  127 bits (320), Expect = 1e-27
 Identities = 68/170 (40%), Positives = 101/170 (59%)
 Frame = -2

Query: 521 EASRLDGFHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPL 342
           +A+    F YH RC E+ LTHL++ADDL++ +   V S++ I+     F   +GL+ +  
Sbjct: 207 QAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISME 266

Query: 341 KSNLYVAGMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVIS 162
           KS +Y+AG+ E +  E+ +   F  G  P RYLG+PL T+RL   +Y  LLE I KK+ +
Sbjct: 267 KSTIYLAGVTEDVYHEIQNRYQFDVGQLPVRYLGLPLVTKRLTATDYSPLLEHIKKKIGT 326

Query: 161 WPKHTLSHAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
           W    LS+AGR+ LI SVL  +  FWL+   +P   I +I  I  +F+WS
Sbjct: 327 WTTRYLSYAGRLNLITSVLWSICNFWLAAFRLPRECIREIDKICSAFLWS 376


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/163 (38%), Positives = 95/163 (58%)
 Frame = -2

Query: 500  FHYHPRCAEVELTHLAYADDLLLFARADVSSLNLIMGCLTDFGDKAGLRANPLKSNLYVA 321
            F YHPRC  + LTHL +ADD+++F+     SL  ++    DF   +GL  +  KS L++A
Sbjct: 942  FGYHPRCRNMGLTHLCFADDIMVFSAGSAHSLEGVLAIFKDFAAFSGLNISLEKSTLFMA 1001

Query: 320  GMEEQLRGELLHITGFQQGVFPFRYLGIPLATERLRIANYGSLLEAITKKVISWPKHTLS 141
             +  +    +L    F  G  P RYLG+PL T+R+ +A+   LLE I  ++ SW    LS
Sbjct: 1002 SISSETCASILARFPFDSGSLPVRYLGLPLMTKRMTLADCLPLLEKIRSRISSWKNRFLS 1061

Query: 140  HAGRIELIRSVLQGVECFWLSILPIPSGVIDKIYGISRSFVWS 12
            +AGR++L+ SV+  +  FW+S   +P   I +I  IS +F+WS
Sbjct: 1062 YAGRLQLLNSVISSLTKFWISAFRLPRACIREIEQISAAFLWS 1104