BLASTX nr result
ID: Zingiber24_contig00042049
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00042049
(284 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004954725.1| PREDICTED: pentatricopeptide repeat-containi... 119 3e-25
gb|EMT09559.1| hypothetical protein F775_15281 [Aegilops tauschii] 117 2e-24
gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays] 116 3e-24
gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indi... 115 8e-24
emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group] gi|222628... 115 8e-24
emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group] 115 8e-24
ref|XP_006653413.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [S... 109 3e-22
ref|XP_004229583.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_006354576.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
gb|ADE76772.1| unknown [Picea sitchensis] 80 2e-13
ref|XP_006398078.1| hypothetical protein EUTSA_v10001098mg [Eutr... 80 3e-13
gb|ABD96900.1| hypothetical protein [Cleome spinosa] 80 3e-13
ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
emb|CBI33393.3| unnamed protein product [Vitis vinifera] 80 4e-13
gb|EMJ18188.1| hypothetical protein PRUPE_ppa002640mg [Prunus pe... 78 1e-12
ref|XP_006299596.1| hypothetical protein CARUB_v10015774mg [Caps... 78 1e-12
ref|XP_002530609.1| pentatricopeptide repeat-containing protein,... 78 1e-12
gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabid... 77 2e-12
>ref|XP_004954725.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Setaria italica]
Length = 656
Score = 119 bits (299), Expect = 3e-25
Identities = 54/94 (57%), Positives = 69/94 (73%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T+SVVIS+CASLVALG G+M+H+C I+ G++HD CGL+ +A+ V
Sbjct: 374 PDQATWSVVISICASLVALGCGRMVHVCAIKTGFEHDALVMSSLISMYSKCGLIIEASQV 433
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
FE I +RDT++WNAMIATYAYHG EA KLFD+
Sbjct: 434 FEMIMQRDTVTWNAMIATYAYHGLAAEALKLFDR 467
>gb|EMT09559.1| hypothetical protein F775_15281 [Aegilops tauschii]
Length = 836
Score = 117 bits (293), Expect = 2e-24
Identities = 53/94 (56%), Positives = 68/94 (72%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
P+Q T SVVIS+CASLVALG GKM+HLC ++ G++ D CGL+++A+ V
Sbjct: 314 PNQATLSVVISICASLVALGCGKMVHLCAVKTGFERDALVMSSLISMYSKCGLIAEASQV 373
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
FE + +RDT++WNAMIATYAYHG EA KLFDK
Sbjct: 374 FELMLQRDTVTWNAMIATYAYHGMAAEALKLFDK 407
>gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 116 bits (290), Expect = 3e-24
Identities = 52/94 (55%), Positives = 68/94 (72%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T+SVVISVCASL ALG G+M+H+C I+ G++HD CGL+++A+ V
Sbjct: 376 PDQATWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQV 435
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
F+ I +RDT++WNAMIATYAYHG EA LFD+
Sbjct: 436 FDLIVQRDTVTWNAMIATYAYHGLAAEALALFDR 469
>gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 115 bits (287), Expect = 8e-24
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T SVVIS+CASLV+LG GKM+HL I+ G++HD CGL+S+A+ V
Sbjct: 373 PDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQV 432
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFD 5
FE I +RDT++WNAMIATYAYHG EA K+FD
Sbjct: 433 FELILQRDTVTWNAMIATYAYHGLADEALKVFD 465
>emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group] gi|222628896|gb|EEE61028.1|
hypothetical protein OsJ_14863 [Oryza sativa Japonica
Group]
Length = 655
Score = 115 bits (287), Expect = 8e-24
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T SVVIS+CASLV+LG GKM+HL I+ G++HD CGL+S+A+ V
Sbjct: 373 PDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQV 432
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFD 5
FE I +RDT++WNAMIATYAYHG EA K+FD
Sbjct: 433 FELILQRDTVTWNAMIATYAYHGLADEALKVFD 465
>emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 115 bits (287), Expect = 8e-24
Identities = 54/93 (58%), Positives = 67/93 (72%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T SVVIS+CASLV+LG GKM+HL I+ G++HD CGL+S+A+ V
Sbjct: 373 PDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQV 432
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFD 5
FE I +RDT++WNAMIATYAYHG EA K+FD
Sbjct: 433 FELILQRDTVTWNAMIATYAYHGLADEALKVFD 465
>ref|XP_006653413.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Oryza brachyantha]
Length = 664
Score = 114 bits (286), Expect = 1e-23
Identities = 53/93 (56%), Positives = 67/93 (72%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T SVVIS+CASLV+LG GKM+HL I+ G++HD CG++ +A+ V
Sbjct: 382 PDQATLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGIIGEASQV 441
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFD 5
FE IS+RDT++WNAMIATYAYHG EA KLF+
Sbjct: 442 FELISQRDTVTWNAMIATYAYHGLADEALKLFE 474
>ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 114 bits (286), Expect = 1e-23
Identities = 51/94 (54%), Positives = 69/94 (73%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PD+ T SVVIS+CASLVALG+GKM+HL ++ G++HD CGL+++A+ V
Sbjct: 382 PDEATLSVVISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMYSKCGLIAEASQV 441
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
F+ + +RDT++WNAMIATYAYHG EA KLF+K
Sbjct: 442 FKLLVQRDTVTWNAMIATYAYHGMASEALKLFNK 475
>ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein
SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 109 bits (273), Expect = 3e-22
Identities = 48/94 (51%), Positives = 66/94 (70%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ T+SV IS+C+SL ALG G+M+H+C I+ G++ D CGL+++A+ V
Sbjct: 332 PDQATWSVAISICSSLAALGCGRMVHVCTIKTGFERDALVMSSLISMYSKCGLITEASQV 391
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
F+ I +RDT++WNAMIATYAYHG EA LFD+
Sbjct: 392 FDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDR 425
>ref|XP_004229583.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum lycopersicum]
Length = 599
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/92 (44%), Positives = 54/92 (58%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ TFS V+S+C L GWG+ LH V ++G+++D CG + +A+ +
Sbjct: 371 PDQTTFSNVVSLCGVLALYGWGRALHASVTKSGFENDTMVMSAFISMYSRCGFIYEASSL 430
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLF 8
F + KRDTISWNAMI A HGS EA LF
Sbjct: 431 FRSMKKRDTISWNAMIVAQACHGSAKEALDLF 462
>ref|XP_006354576.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Solanum tuberosum]
Length = 616
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/92 (44%), Positives = 54/92 (58%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ TFS V+S+C L GWG+ LH V ++G+++D CG + +A+ +
Sbjct: 314 PDQTTFSNVVSLCGVLSLYGWGRALHASVTKSGFENDTMIMSAFISMYSRCGFIYEASSL 373
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLF 8
F + KRDTISWNAMI A HGS EA LF
Sbjct: 374 FRSLKKRDTISWNAMIVAQACHGSTKEALDLF 405
>gb|ADE76772.1| unknown [Picea sitchensis]
Length = 232
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/94 (41%), Positives = 57/94 (60%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
P+ TF V+ CA+L AL GK+LHL +I++G++ DV C + DA+ V
Sbjct: 28 PNAETFPSVLPACANLAALEPGKVLHLYIIKSGFESDVFVGSTLIDMYAKCSSIGDASKV 87
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
F+ +S R+ +SWNAMIA YA HG +A LF++
Sbjct: 88 FDGMSTRNVVSWNAMIAAYAIHGCGKQALDLFEQ 121
>ref|XP_006398078.1| hypothetical protein EUTSA_v10001098mg [Eutrema salsugineum]
gi|557099167|gb|ESQ39531.1| hypothetical protein
EUTSA_v10001098mg [Eutrema salsugineum]
Length = 889
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/94 (41%), Positives = 56/94 (59%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PD+ T++ V+ CA+L + G GK +H VI+ Q DV CG + D+ L+
Sbjct: 587 PDKFTYATVLDTCANLASGGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLKDSRLM 646
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
FE S+RD ++WNAMI YA+HG EA KLF++
Sbjct: 647 FEKSSRRDFVTWNAMICGYAHHGKGEEAMKLFER 680
>gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/93 (41%), Positives = 55/93 (59%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PD+ T+S V+ CA+L ++G GK +H VI+ Q+DV CG + D+ L+
Sbjct: 609 PDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGNLHDSRLM 668
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFD 5
FE RD ++WNAMI YA+HG EA KLF+
Sbjct: 669 FEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFE 701
>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/94 (43%), Positives = 55/94 (58%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ TF+ +S CA L AL GK LH V+++GY D+ CG +S A L+
Sbjct: 452 PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELL 511
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
F+ I D +SWN++IA YA +G+ EA KLF K
Sbjct: 512 FKDIDHFDVVSWNSLIAAYALNGNGREALKLFHK 545
>emb|CBI33393.3| unnamed protein product [Vitis vinifera]
Length = 752
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/94 (43%), Positives = 55/94 (58%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PDQ TF+ +S CA L AL GK LH V+++GY D+ CG +S A L+
Sbjct: 214 PDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELL 273
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
F+ I D +SWN++IA YA +G+ EA KLF K
Sbjct: 274 FKDIDHFDVVSWNSLIAAYALNGNGREALKLFHK 307
>gb|EMJ18188.1| hypothetical protein PRUPE_ppa002640mg [Prunus persica]
Length = 649
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/92 (42%), Positives = 57/92 (61%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PD+ TF+ +S CA+L AL GK LH V++ GY +D+ CG V++A LV
Sbjct: 375 PDESTFACGLSACANLAALQVGKQLHHLVVKGGYVNDLFVCNALITMYAKCGRVTNAELV 434
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLF 8
FE I+ D +SWN++I+ YA +G+ EA +LF
Sbjct: 435 FEDINHGDIVSWNSLISGYALNGNGGEAVELF 466
>ref|XP_006299596.1| hypothetical protein CARUB_v10015774mg [Capsella rubella]
gi|482568305|gb|EOA32494.1| hypothetical protein
CARUB_v10015774mg [Capsella rubella]
Length = 1030
Score = 77.8 bits (190), Expect = 1e-12
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PD+ T++ V+ CA+L + G GK +H VI+ Q DV CG + D+ L+
Sbjct: 601 PDKFTYATVLDTCANLASTGLGKQIHAHVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
FE +RD ++WNAMI YA+HG EA +LF++
Sbjct: 661 FEKAMRRDFVTWNAMICGYAHHGKGEEAIQLFER 694
>ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223529857|gb|EEF31789.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 684
Score = 77.8 bits (190), Expect = 1e-12
Identities = 34/89 (38%), Positives = 56/89 (62%)
Frame = -2
Query: 271 TFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALVFECI 92
T ++++S+CAS+ ALG GK +H ++R+G+ +V CGL+ ++ VF +
Sbjct: 498 TLNIILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDWSSRVFTAL 557
Query: 91 SKRDTISWNAMIATYAYHGSVVEAFKLFD 5
+K+DT+SWNA+I+ YA HG EA F+
Sbjct: 558 AKKDTVSWNALISAYAQHGKGNEAIYQFE 586
>gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/94 (39%), Positives = 55/94 (58%)
Frame = -2
Query: 283 PDQGTFSVVISVCASLVALGWGKMLHLCVIRAGYQHDVXXXXXXXXXXXSCGLVSDAALV 104
PD+ T++ V+ CA+L + G GK +H VI+ Q DV CG + D+ L+
Sbjct: 559 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 618
Query: 103 FECISKRDTISWNAMIATYAYHGSVVEAFKLFDK 2
FE +RD ++WNAMI YA+HG EA +LF++
Sbjct: 619 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFER 652