BLASTX nr result
ID: Zingiber24_contig00041914
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041914
(265 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFW73630.1| putative RING zinc finger domain superfamily prot... 80 4e-13
dbj|BAD16922.1| zinc finger -like [Oryza sativa Japonica Group] ... 79 6e-13
ref|XP_002438034.1| hypothetical protein SORBIDRAFT_10g007000 [S... 79 6e-13
gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indi... 79 6e-13
gb|EAZ24742.1| hypothetical protein OsJ_08513 [Oryza sativa Japo... 79 6e-13
ref|XP_004964907.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 79 8e-13
ref|XP_004954037.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 78 1e-12
gb|AFW76696.1| putative RING zinc finger domain superfamily prot... 78 1e-12
gb|AFW64340.1| putative RING zinc finger domain superfamily prot... 77 2e-12
gb|AFW64339.1| putative RING zinc finger domain superfamily prot... 77 2e-12
ref|XP_002452884.1| hypothetical protein SORBIDRAFT_04g034270 [S... 77 3e-12
ref|XP_003573045.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 74 2e-11
ref|XP_006472751.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 73 5e-11
ref|XP_006434154.1| hypothetical protein CICLE_v10003221mg [Citr... 73 5e-11
ref|NP_001149547.1| RHC1A [Zea mays] gi|195627928|gb|ACG35794.1|... 73 5e-11
gb|EOY16234.1| RING/U-box superfamily protein, putative [Theobro... 72 1e-10
ref|XP_004499404.1| PREDICTED: E3 ubiquitin-protein ligase RING1... 70 3e-10
ref|XP_003601068.1| RING finger protein [Medicago truncatula] gi... 70 3e-10
ref|XP_002513785.1| zinc finger protein, putative [Ricinus commu... 69 7e-10
dbj|BAD35703.1| zinc finger-like [Oryza sativa Japonica Group] 67 2e-09
>gb|AFW73630.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 321
Score = 79.7 bits (195), Expect = 4e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLP 104
RTCR++WCYQC RA+R+I PS+D+ CPRC+GRFLHEIDLP
Sbjct: 11 RTCRMYWCYQCGRALRIISYPSTDVFCPRCFGRFLHEIDLP 51
>dbj|BAD16922.1| zinc finger -like [Oryza sativa Japonica Group]
gi|46806079|dbj|BAD17327.1| zinc finger -like [Oryza
sativa Japonica Group]
Length = 340
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1
Query: 265 PSSMSLRHPSAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPR 95
P+ +RH RTCR++WCYQC RA+R+I PS+D+ CPRC+GRFLHEID P PR
Sbjct: 6 PAQGGVRHH----RTCRMYWCYQCGRAIRIISYPSTDVFCPRCFGRFLHEID-PPPR 57
>ref|XP_002438034.1| hypothetical protein SORBIDRAFT_10g007000 [Sorghum bicolor]
gi|241916257|gb|EER89401.1| hypothetical protein
SORBIDRAFT_10g007000 [Sorghum bicolor]
Length = 334
Score = 79.0 bits (193), Expect = 6e-13
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVI 86
RT RL+WCY C RAVR + P+SD+ CPRC+GRFLHEIDLP PR V+
Sbjct: 14 RTWRLYWCYVCGRAVRAVSYPTSDVFCPRCFGRFLHEIDLPAPRPVV 60
>gb|EEC74065.1| hypothetical protein OsI_09075 [Oryza sativa Indica Group]
Length = 327
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1
Query: 265 PSSMSLRHPSAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPR 95
P+ +RH RTCR++WCYQC RA+R+I PS+D+ CPRC+GRFLHEID P PR
Sbjct: 6 PAQGGVRHH----RTCRMYWCYQCGRAIRIISYPSTDVFCPRCFGRFLHEID-PPPR 57
>gb|EAZ24742.1| hypothetical protein OsJ_08513 [Oryza sativa Japonica Group]
Length = 337
Score = 79.0 bits (193), Expect = 6e-13
Identities = 34/57 (59%), Positives = 43/57 (75%)
Frame = -1
Query: 265 PSSMSLRHPSAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPR 95
P+ +RH RTCR++WCYQC RA+R+I PS+D+ CPRC+GRFLHEID P PR
Sbjct: 6 PAQGGVRHH----RTCRMYWCYQCGRAIRIISYPSTDVFCPRCFGRFLHEID-PPPR 57
>ref|XP_004964907.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 310
Score = 78.6 bits (192), Expect = 8e-13
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVI 86
RT RL+WCY C RAVR + P+SD+ CPRC+GRFLHEIDLP PR V+
Sbjct: 14 RTWRLYWCYVCGRAVRAVSYPTSDVFCPRCFGRFLHEIDLPAPRPVL 60
>ref|XP_004954037.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Setaria italica]
Length = 311
Score = 78.2 bits (191), Expect = 1e-12
Identities = 30/44 (68%), Positives = 37/44 (84%)
Frame = -1
Query: 235 AAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLP 104
A RTCR++WCYQC RA+R+I PS+D+ CPRC+GRFLHEID P
Sbjct: 12 ARHRTCRMYWCYQCGRALRIISYPSTDVFCPRCFGRFLHEIDAP 55
>gb|AFW76696.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 77.8 bits (190), Expect = 1e-12
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVI 86
RT RL+WCY C RAVR I P+S++ CPRC+GRFLHEIDLP PR V+
Sbjct: 20 RTWRLYWCYVCGRAVRAISYPASEVFCPRCFGRFLHEIDLPAPRPVV 66
>gb|AFW64340.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 77.4 bits (189), Expect = 2e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 235 AAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPR 95
A RTCR +WCYQC RA+R+I PS+D+ CPRC+GRFLHE+D P R
Sbjct: 9 ARHRTCRTYWCYQCGRALRIISCPSTDVFCPRCFGRFLHEVDPPTAR 55
>gb|AFW64339.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 323
Score = 77.4 bits (189), Expect = 2e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 235 AAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPR 95
A RTCR +WCYQC RA+R+I PS+D+ CPRC+GRFLHE+D P R
Sbjct: 9 ARHRTCRTYWCYQCGRALRIISCPSTDVFCPRCFGRFLHEVDPPTAR 55
>ref|XP_002452884.1| hypothetical protein SORBIDRAFT_04g034270 [Sorghum bicolor]
gi|241932715|gb|EES05860.1| hypothetical protein
SORBIDRAFT_04g034270 [Sorghum bicolor]
Length = 318
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/54 (62%), Positives = 42/54 (77%), Gaps = 1/54 (1%)
Frame = -1
Query: 256 MSLRHPSAAP-RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRP 98
MS P+ A RTCR++WCYQC RA+R+I PS+D+ CPRC+GRFLHEID P P
Sbjct: 1 MSATTPAPARHRTCRMYWCYQCGRALRIISYPSTDVFCPRCFGRFLHEID-PTP 53
>ref|XP_003573045.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
distachyon]
Length = 328
Score = 73.9 bits (180), Expect = 2e-11
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPR 95
RTCR++WCY C RA+R+I P++D+ CPRC+GRFLHEID P PR
Sbjct: 13 RTCRMYWCYACGRALRIISYPATDVFCPRCFGRFLHEID-PPPR 55
>ref|XP_006472751.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Citrus sinensis]
Length = 358
Score = 72.8 bits (177), Expect = 5e-11
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -1
Query: 238 SAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVIEFT 77
+ A R L+WCYQCHRAVR+ + S+I CPRC G F+ EI++ RPRLV++FT
Sbjct: 23 NGANRNYPLYWCYQCHRAVRISSTNPSEIACPRCSGHFVSEIEISRPRLVVDFT 76
>ref|XP_006434154.1| hypothetical protein CICLE_v10003221mg [Citrus clementina]
gi|557536276|gb|ESR47394.1| hypothetical protein
CICLE_v10003221mg [Citrus clementina]
Length = 380
Score = 72.8 bits (177), Expect = 5e-11
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -1
Query: 238 SAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVIEFT 77
+ A R L+WCYQCHRAVR+ + S+I CPRC G F+ EI++ RPRLV++FT
Sbjct: 23 NGANRNYPLYWCYQCHRAVRISSTNPSEIACPRCSGHFVSEIEISRPRLVVDFT 76
>ref|NP_001149547.1| RHC1A [Zea mays] gi|195627928|gb|ACG35794.1| RHC1A [Zea mays]
Length = 318
Score = 72.8 bits (177), Expect = 5e-11
Identities = 30/48 (62%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Frame = -1
Query: 235 AAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLH-EIDLPRPR 95
A RTCR +WCYQC RA+R+I PS+D+ CPRC+GRFLH E+D P R
Sbjct: 9 ARHRTCRTYWCYQCGRALRIISCPSTDVFCPRCFGRFLHEEVDPPTAR 56
>gb|EOY16234.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 356
Score = 71.6 bits (174), Expect = 1e-10
Identities = 28/54 (51%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Frame = -1
Query: 235 AAP-RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVIEFT 77
AAP R +L+WCY CH+AVR+ + S+I+CPRC+G+F+ E+++ RPR+V++FT
Sbjct: 16 AAPERNLQLYWCYNCHQAVRIASTNPSEIICPRCFGQFVCEMEINRPRMVVDFT 69
>ref|XP_004499404.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cicer arietinum]
Length = 322
Score = 70.1 bits (170), Expect = 3e-10
Identities = 26/50 (52%), Positives = 41/50 (82%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVIEFT 77
R +L+WC+QC+R VR+ SS+++CPRC+G+F+ EI++P PRLV++FT
Sbjct: 15 RNFQLYWCFQCNRTVRVAPDNSSNLICPRCFGQFICEINIPTPRLVVDFT 64
>ref|XP_003601068.1| RING finger protein [Medicago truncatula]
gi|355490116|gb|AES71319.1| RING finger protein
[Medicago truncatula]
Length = 328
Score = 70.1 bits (170), Expect = 3e-10
Identities = 27/50 (54%), Positives = 42/50 (84%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVIEFT 77
R +L++C+QC+R VR+ SSD++CPRC+G+F+ EI++PRPRLV++FT
Sbjct: 15 RNFQLYYCFQCNRTVRVAPYNSSDLICPRCFGQFICEINIPRPRLVVDFT 64
>ref|XP_002513785.1| zinc finger protein, putative [Ricinus communis]
gi|223546871|gb|EEF48368.1| zinc finger protein,
putative [Ricinus communis]
Length = 382
Score = 68.9 bits (167), Expect = 7e-10
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = -1
Query: 265 PSSMSLRHPSAAPRTCRLFWCYQCHRAVRLICSPSSDILCPRCYGRFLHEIDLPRPRLVI 86
P +R A RT + +WCYQCHR VR+ S S+I+CPRC +FL E+++ R RLV+
Sbjct: 5 PPRTRIRTYDATTRTFQPYWCYQCHRMVRIAASDPSEIICPRCSSQFLCELEMNRQRLVV 64
Query: 85 EF 80
+F
Sbjct: 65 DF 66
>dbj|BAD35703.1| zinc finger-like [Oryza sativa Japonica Group]
Length = 331
Score = 67.4 bits (163), Expect = 2e-09
Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = -1
Query: 226 RTCRLFWCYQCHRAVRLIC-SPSSDILCPRCYGRFLHEIDLPRPRL 92
R L+WCY C RA+R++ S +SD+ CPRC+GRFLHEIDLP PR+
Sbjct: 15 RRWNLYWCYVCRRALRVVVPSATSDVYCPRCFGRFLHEIDLPVPRV 60