BLASTX nr result

ID: Zingiber24_contig00041892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00041892
         (208 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172641.1| PREDICTED: ethylene-responsive transcription...    56   4e-06
ref|XP_004149454.1| PREDICTED: ethylene-responsive transcription...    56   4e-06
gb|EXB72466.1| Ethylene-responsive transcription factor CRF4 [Mo...    55   1e-05
gb|ADE41106.1| AP2 domain class transcription factor [Malus dome...    55   1e-05
ref|XP_002276577.1| PREDICTED: ethylene-responsive transcription...    55   1e-05

>ref|XP_004172641.1| PREDICTED: ethylene-responsive transcription factor CRF4-like,
           partial [Cucumis sativus]
          Length = 313

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = +1

Query: 1   SAAIKLRGPDASTNF----PAAVPKENLSENNPTSISGGYEYDTGEESRDIASPTSVL 162
           +AAI+LRGPDA TNF    P  +P++ +   N  S+SG Y YD+ EES +++SPTSVL
Sbjct: 134 NAAIQLRGPDALTNFATPPPVPMPEKEVETANIPSVSGSY-YDSSEESHNLSSPTSVL 190


>ref|XP_004149454.1| PREDICTED: ethylene-responsive transcription factor CRF4-like
           [Cucumis sativus]
          Length = 326

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
 Frame = +1

Query: 1   SAAIKLRGPDASTNF----PAAVPKENLSENNPTSISGGYEYDTGEESRDIASPTSVL 162
           +AAI+LRGPDA TNF    P  +P++ +   N  S+SG Y YD+ EES +++SPTSVL
Sbjct: 147 NAAIQLRGPDALTNFATPPPVPMPEKEVETANIPSVSGSY-YDSSEESHNLSSPTSVL 203


>gb|EXB72466.1| Ethylene-responsive transcription factor CRF4 [Morus notabilis]
          Length = 368

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 8/62 (12%)
 Frame = +1

Query: 1   SAAIKLRGPDASTNFPA--------AVPKENLSENNPTSISGGYEYDTGEESRDIASPTS 156
           +AAIKLRGPDA TNF           +P+EN + +   S+SG   YD+G+ESR+++SPTS
Sbjct: 165 NAAIKLRGPDALTNFVTPFQKDQNPELPEENKASSASASVSG---YDSGDESRNLSSPTS 221

Query: 157 VL 162
           VL
Sbjct: 222 VL 223


>gb|ADE41106.1| AP2 domain class transcription factor [Malus domestica]
          Length = 353

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/66 (51%), Positives = 39/66 (59%), Gaps = 12/66 (18%)
 Frame = +1

Query: 1   SAAIKLRGPDASTNFPAAVPKE------------NLSENNPTSISGGYEYDTGEESRDIA 144
           +AAIKLRGPDA TNF A  PKE             +  N  TS SG   YD+G ES ++A
Sbjct: 158 NAAIKLRGPDALTNFVAPPPKEEEKPEPPVIESIEVETNGTTSASG---YDSGSESHNLA 214

Query: 145 SPTSVL 162
           SPTSVL
Sbjct: 215 SPTSVL 220


>ref|XP_002276577.1| PREDICTED: ethylene-responsive transcription factor CRF4 [Vitis
           vinifera]
          Length = 314

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = +1

Query: 4   AAIKLRGPDASTNFPAAVPKENLSENNPTSISGGYEYDTGEESRDIASPTSVLR 165
           AAI++RGPDA TNF    PK    E NP S+SG   YD+G +SR + SPTSVLR
Sbjct: 147 AAIRIRGPDALTNFAKPPPKTIPPEINP-SVSG---YDSGRDSRSVCSPTSVLR 196


Top