BLASTX nr result
ID: Zingiber24_contig00041851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041851
(286 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 194 8e-48
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 194 8e-48
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 194 8e-48
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 194 8e-48
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 194 8e-48
gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi... 194 8e-48
ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Popu... 193 2e-47
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 191 7e-47
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 191 9e-47
ref|XP_002315996.2| DNA-directed RNA polymerase family protein [... 191 1e-46
gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma ... 191 1e-46
gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 191 1e-46
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 191 1e-46
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 191 1e-46
emb|CBL87031.1| RNA polymerase [Nuphar advena] 190 1e-46
ref|XP_006384250.1| hypothetical protein POPTR_0004s11050g [Popu... 189 3e-46
ref|XP_006384249.1| hypothetical protein POPTR_0004s11050g [Popu... 189 3e-46
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 189 3e-46
ref|XP_002331270.1| predicted protein [Populus trichocarpa] 189 3e-46
ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [A... 188 7e-46
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 839
Score = 194 bits (494), Expect = 8e-48
Identities = 86/94 (91%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 414 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 473
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAE
Sbjct: 474 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 507
>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 703
Score = 194 bits (494), Expect = 8e-48
Identities = 86/94 (91%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 387 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 446
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAE
Sbjct: 447 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 480
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 194 bits (494), Expect = 8e-48
Identities = 86/94 (91%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAE
Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 685
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 194 bits (494), Expect = 8e-48
Identities = 86/94 (91%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 592 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 651
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAE
Sbjct: 652 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 685
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 194 bits (494), Expect = 8e-48
Identities = 86/94 (91%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 558 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 617
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAE
Sbjct: 618 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 651
>gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group]
Length = 845
Score = 194 bits (494), Expect = 8e-48
Identities = 86/94 (91%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 420 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 479
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHLED+FDSAD+PLEG+RWWLGAE
Sbjct: 480 SYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 513
>ref|XP_002311418.2| hypothetical protein POPTR_0008s11200g [Populus trichocarpa]
gi|550332836|gb|EEE88785.2| hypothetical protein
POPTR_0008s11200g [Populus trichocarpa]
Length = 988
Score = 193 bits (490), Expect = 2e-47
Identities = 84/94 (89%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 563 PHNLDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 622
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R++FTENHL+D+FDSAD+PLEGRRWWLGAE
Sbjct: 623 SYDGRISFTENHLDDIFDSADQPLEGRRWWLGAE 656
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 191 bits (486), Expect = 7e-47
Identities = 85/94 (90%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 550 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAAGVDKL 609
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AF ENHLE++FDSAD+PLEGRRWWLGAE
Sbjct: 610 SYDGRIAFAENHLEEIFDSADRPLEGRRWWLGAE 643
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 191 bits (485), Expect = 9e-47
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGL WLKIHLANLYA GVDKL
Sbjct: 551 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKL 610
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D RVAFTENHLE++FDSAD+PLEG+RWWLGAE
Sbjct: 611 SYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAE 644
>ref|XP_002315996.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550329816|gb|EEF02167.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 862
Score = 191 bits (484), Expect = 1e-46
Identities = 82/94 (87%), Positives = 92/94 (97%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHN+DFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 437 PHNVDFRGRAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 496
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R++FTENHL+D+FDSAD+PLEG+RWWLGAE
Sbjct: 497 SYDGRISFTENHLDDIFDSADRPLEGQRWWLGAE 530
>gb|EOY01555.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
Length = 932
Score = 191 bits (484), Expect = 1e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 571 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 630
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S++ R+AFTENHL+D+FDSAD+PLEGRRWWL AE
Sbjct: 631 SYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAE 664
>gb|EOY01553.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508709657|gb|EOY01554.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 996
Score = 191 bits (484), Expect = 1e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRGVLEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 571 PHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 630
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S++ R+AFTENHL+D+FDSAD+PLEGRRWWL AE
Sbjct: 631 SYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAE 664
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 191 bits (484), Expect = 1e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLAN+YA GVDKL
Sbjct: 385 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 444
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S++ RVAFTENHLED+FDSAD+PLEGRRWWL AE
Sbjct: 445 SYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAE 478
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 191 bits (484), Expect = 1e-46
Identities = 84/94 (89%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLAN+YA GVDKL
Sbjct: 553 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKL 612
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S++ RVAFTENHLED+FDSAD+PLEGRRWWL AE
Sbjct: 613 SYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAE 646
>emb|CBL87031.1| RNA polymerase [Nuphar advena]
Length = 990
Score = 190 bits (483), Expect = 1e-46
Identities = 84/94 (89%), Positives = 90/94 (95%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 572 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 631
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AF ENHL+D+FDSADKPLEG RWWLGAE
Sbjct: 632 SYDGRLAFVENHLDDIFDSADKPLEGSRWWLGAE 665
>ref|XP_006384250.1| hypothetical protein POPTR_0004s11050g [Populus trichocarpa]
gi|550340796|gb|ERP62047.1| hypothetical protein
POPTR_0004s11050g [Populus trichocarpa]
Length = 430
Score = 189 bits (480), Expect = 3e-46
Identities = 83/94 (88%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+A GVDKL
Sbjct: 122 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFACGVDKL 181
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
SH+ R+AFTENHL+D+FDSADKPLEG+RWWL AE
Sbjct: 182 SHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAE 215
>ref|XP_006384249.1| hypothetical protein POPTR_0004s11050g [Populus trichocarpa]
gi|550340795|gb|ERP62046.1| hypothetical protein
POPTR_0004s11050g [Populus trichocarpa]
Length = 546
Score = 189 bits (480), Expect = 3e-46
Identities = 83/94 (88%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+A GVDKL
Sbjct: 122 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFACGVDKL 181
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
SH+ R+AFTENHL+D+FDSADKPLEG+RWWL AE
Sbjct: 182 SHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAE 215
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 189 bits (480), Expect = 3e-46
Identities = 82/94 (87%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+A GVDKL
Sbjct: 164 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKL 223
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+AFTENHL+D+FDSAD+PLEG+RWWL AE
Sbjct: 224 SYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAE 257
>ref|XP_002331270.1| predicted protein [Populus trichocarpa]
Length = 847
Score = 189 bits (480), Expect = 3e-46
Identities = 83/94 (88%), Positives = 91/94 (96%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANL+A GVDKL
Sbjct: 423 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFACGVDKL 482
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
SH+ R+AFTENHL+D+FDSADKPLEG+RWWL AE
Sbjct: 483 SHEGRIAFTENHLDDIFDSADKPLEGKRWWLHAE 516
>ref|XP_006844103.1| hypothetical protein AMTR_s00006p00254180 [Amborella trichopoda]
gi|548846502|gb|ERN05778.1| hypothetical protein
AMTR_s00006p00254180 [Amborella trichopoda]
Length = 1006
Score = 188 bits (477), Expect = 7e-46
Identities = 83/94 (88%), Positives = 89/94 (94%)
Frame = -3
Query: 284 PHNLDFRGRAYPMHPYLNHLGSDICRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDKL 105
PHNLDFRGRAYPMHPYLNHLGSD+CRG+LEFAEGRPLGKSGLRWLKIHLANLYA GVDKL
Sbjct: 581 PHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKL 640
Query: 104 SHDARVAFTENHLEDVFDSADKPLEGRRWWLGAE 3
S+D R+ F ENHLED+FDSAD+PLEG RWWLGAE
Sbjct: 641 SYDGRLEFVENHLEDIFDSADRPLEGGRWWLGAE 674