BLASTX nr result
ID: Zingiber24_contig00041740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041740
(427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 65 1e-08
ref|XP_006431492.1| hypothetical protein CICLE_v10000271mg [Citr... 64 2e-08
ref|XP_006470989.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
gb|EMJ23071.1| hypothetical protein PRUPE_ppa001970mg [Prunus pe... 63 5e-08
gb|EXB80396.1| hypothetical protein L484_010965 [Morus notabilis] 62 6e-08
gb|EOY20245.1| Glutamine-rich protein 23 [Theobroma cacao] 62 1e-07
ref|XP_002328724.1| predicted protein [Populus trichocarpa] gi|5... 61 2e-07
ref|XP_006592648.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_006389480.1| hypothetical protein POPTR_0022s00240g [Popu... 60 2e-07
ref|XP_002331124.1| predicted protein [Populus trichocarpa] 60 2e-07
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 60 4e-07
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera] 60 4e-07
ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [S... 59 9e-07
gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japo... 58 1e-06
ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group] g... 58 1e-06
ref|XP_004503478.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegi... 57 3e-06
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
E+ +P+ + Y+V++ LCN G LD REL +Q+++ GI TP F+ DAF KAGR
Sbjct: 497 ERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLEEFVKDAFVKAGRHE 556
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 557 EIERLLNMN 565
>ref|XP_006431492.1| hypothetical protein CICLE_v10000271mg [Citrus clementina]
gi|557533614|gb|ESR44732.1| hypothetical protein
CICLE_v10000271mg [Citrus clementina]
Length = 840
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ Y+V+V LCN G D +++ +QM++ G+ TP F+ + FGKAGRG
Sbjct: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
Query: 245 EIEELLTGN 219
EIE +L +
Sbjct: 553 EIERILNAD 561
>ref|XP_006470989.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Citrus sinensis]
Length = 840
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/69 (40%), Positives = 43/69 (62%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ Y+V+V LCN G D +++ +QM++ G+ TP F+ + FGKAGRG
Sbjct: 493 EKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDFVRETFGKAGRGE 552
Query: 245 EIEELLTGN 219
EIE +L +
Sbjct: 553 EIERVLNAD 561
>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
E+ +P+ + Y+V++ LCN G LD REL +Q+++ GI TP F+ +AF KAGR
Sbjct: 305 ERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHE 364
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 365 EIERLLNMN 373
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
E+ +P+ + Y+V++ LCN G LD REL +Q+++ GI TP F+ +AF KAGR
Sbjct: 471 ERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAFVKAGRHE 530
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 531 EIERLLNMN 539
>gb|EMJ23071.1| hypothetical protein PRUPE_ppa001970mg [Prunus persica]
Length = 734
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ S Y+V++ LCN D R+L E+M++ GI P F+ + FGKAGRG
Sbjct: 493 EKDPKPDASFYDVVIRGLCNEVAFDPSRDLLEEMVRYGIGVPPALQQFVNEVFGKAGRGE 552
Query: 245 EIEELLT----GNVASQA 204
EI+ +L GN +QA
Sbjct: 553 EIQRVLNMSKWGNTPAQA 570
>gb|EXB80396.1| hypothetical protein L484_010965 [Morus notabilis]
Length = 836
Score = 62.4 bits (150), Expect = 6e-08
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P++S YEV++ LCN G D +L E++++ GI TP F+ +AF K GRG
Sbjct: 491 EKDPKPDVSCYEVVIKGLCNEGAFDVSLDLVEEVMRYGIGVTPTLQQFVNEAFAKVGRGQ 550
Query: 245 EIEELLT 225
EIE +L+
Sbjct: 551 EIERVLS 557
>gb|EOY20245.1| Glutamine-rich protein 23 [Theobroma cacao]
Length = 897
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ S Y+++V LCNA LD+ ++ +QM++ I TP F+ AFGK GR
Sbjct: 762 EKDPKPDASIYDIVVRGLCNADELDKTLDILDQMMKYSIGVTPALQEFVRGAFGKVGRNE 821
Query: 245 EIEELLTGN 219
EI+ +L N
Sbjct: 822 EIDRVLNEN 830
>ref|XP_002328724.1| predicted protein [Populus trichocarpa]
gi|566168292|ref|XP_006385072.1| hypothetical protein
POPTR_0004s23640g [Populus trichocarpa]
gi|550341840|gb|ERP62869.1| hypothetical protein
POPTR_0004s23640g [Populus trichocarpa]
Length = 689
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = -3
Query: 422 KGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGHE 243
K +P+ S Y+V+V LCNAG LD G+++ +QM++ G+ P F+L+ F AGRG E
Sbjct: 501 KDPKPDSSIYDVVVRGLCNAGALDMGKDIVDQMMKYGVGVPPVLKDFVLEVFENAGRGSE 560
Query: 242 IEELL 228
++ +L
Sbjct: 561 VKSVL 565
>ref|XP_006592648.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 790
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ + YEV++ LC G LD+ REL +++++ G+ T F+ + F KAGRG
Sbjct: 471 EKDPKPDPTCYEVVIKGLCADGLLDKSRELLDEVMRYGVGVTSSLREFVTEVFKKAGRGD 530
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 531 EIERLLDMN 539
>ref|XP_006389480.1| hypothetical protein POPTR_0022s00240g [Populus trichocarpa]
gi|550312303|gb|ERP48394.1| hypothetical protein
POPTR_0022s00240g [Populus trichocarpa]
Length = 850
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = -3
Query: 422 KGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGHE 243
K +P+ S Y+V+V LC+AG LD +++ +QM++ G+ P FL++ FG AGR E
Sbjct: 500 KDPKPDSSIYDVVVRGLCSAGELDASKDMLDQMIKYGVGIPPALKEFLIEVFGNAGRASE 559
Query: 242 IEELL 228
I+ +L
Sbjct: 560 IKSVL 564
>ref|XP_002331124.1| predicted protein [Populus trichocarpa]
Length = 832
Score = 60.5 bits (145), Expect = 2e-07
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = -3
Query: 422 KGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGHE 243
K +P+ S Y+V+V LC+AG LD +++ +QM++ G+ P FL++ FG AGR E
Sbjct: 500 KDPKPDSSIYDVVVRGLCSAGELDASKDMLDQMIKYGVGIPPALKEFLIEVFGNAGRASE 559
Query: 242 IEELL 228
I+ +L
Sbjct: 560 IKSVL 564
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ ++YE+++ LC D R+L QM++ I TP F+++AFGK GR
Sbjct: 489 EKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSE 548
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 549 EIERLLEAN 557
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ ++YE+++ LC D R+L QM++ I TP F+++AFGK GR
Sbjct: 489 EKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSE 548
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 549 EIERLLEAN 557
>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ ++YE+++ LC D R+L QM++ I TP F+++AFGK GR
Sbjct: 489 EKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVVEAFGKEGRSE 548
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 549 EIERLLEAN 557
>ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein
SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
+K +PN ++E+LV ALC GNLD+ R+L M ++GI+ P F ++D F KA R
Sbjct: 486 DKEIKPNTITFEILVKALCKEGNLDQARDLVMDMARNGIVPPPEFRESVVDFFKKADRQE 545
Query: 245 EIEE 234
EIE+
Sbjct: 546 EIEK 549
>gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
+K +PN +++E LV ALC G+LD+ REL M + G+ P F ++D F AGR
Sbjct: 501 DKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEFRDSVIDIFKNAGRQE 560
Query: 245 EIEE 234
EIE+
Sbjct: 561 EIEK 564
>ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide
(PPR) repeat-containing protein, PF01535 [Oryza sativa
Japonica Group] gi|54287606|gb|AAV31350.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|54291873|gb|AAV32241.1|
putative pentatricopeptide repeat-containing protein
[Oryza sativa Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa
Japonica Group]
Length = 911
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
+K +PN +++E LV ALC G+LD+ REL M + G+ P F ++D F AGR
Sbjct: 501 DKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEFRDSVIDIFKNAGRQE 560
Query: 245 EIEE 234
EIE+
Sbjct: 561 EIEK 564
>ref|XP_004503478.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cicer arietinum]
Length = 880
Score = 57.8 bits (138), Expect = 1e-06
Identities = 28/69 (40%), Positives = 42/69 (60%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
EK +P+ S YEV++ LC G LD+ +EL +++++ G+ T + +AF AGRG
Sbjct: 472 EKDPKPDPSCYEVVIKGLCAEGLLDKSQELLDEVMRYGVGLTSALRELVTEAFKNAGRGE 531
Query: 245 EIEELLTGN 219
EIE LL N
Sbjct: 532 EIERLLDMN 540
>gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 754
Score = 56.6 bits (135), Expect = 3e-06
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -3
Query: 425 EKGSRPNLSSYEVLVTALCNAGNLDRGRELFEQMLQSGIIATPGFSVFLLDAFGKAGRGH 246
+K +PN +++E+LV ALC G LDR +L M + G++ATP F + + F A R
Sbjct: 293 DKEIKPNTTTFEILVNALCKEGELDRALDLVRDMARGGVVATPEFRESVSEIFKNADRHE 352
Query: 245 EIEE 234
EIE+
Sbjct: 353 EIEK 356