BLASTX nr result
ID: Zingiber24_contig00041680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041680
(284 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 115 8e-24
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 114 1e-23
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 108 7e-22
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 107 1e-21
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 107 1e-21
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg... 107 2e-21
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 106 4e-21
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 105 5e-21
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 105 6e-21
ref|XP_003633775.1| PREDICTED: uncharacterized protein LOC100854... 103 2e-20
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 102 5e-20
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 102 7e-20
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 102 7e-20
gb|AAD22330.1| putative non-LTR retroelement reverse transcripta... 102 7e-20
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 101 1e-19
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 101 1e-19
gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrat... 100 2e-19
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 100 3e-19
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 100 3e-19
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 100 3e-19
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 115 bits (287), Expect = 8e-24
Identities = 51/89 (57%), Positives = 67/89 (75%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC++KVD++KA+D+V+W FL + L +GFP +F GWI EC+STVSYSV +NG F
Sbjct: 577 PRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQ 636
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSRSMTE 16
R+GLRQGDP+SP LF LC+E SR + E
Sbjct: 637 ARKGLRQGDPMSPFLFALCMEYLSRCLEE 665
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 114 bits (285), Expect = 1e-23
Identities = 50/84 (59%), Positives = 62/84 (73%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC++K+DL KA++++ W FL L GFP QFC WI ECI+T S+SV +NG +YG F
Sbjct: 22 PRCLLKIDLHKAYNSISWEFLDWMLKSMGFPTQFCSWIMECITTTSFSVVVNGSIYGHFK 81
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFS 31
G+ GLRQGDPL P LF LCLE FS
Sbjct: 82 GQHGLRQGDPLFPYLFVLCLEYFS 105
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 108 bits (270), Expect = 7e-22
Identities = 52/93 (55%), Positives = 69/93 (74%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
R M+KVDL+KAFD+V W F+++AL+ G P +F WIH+CIST +++VS+NG GFF
Sbjct: 565 RGMLKVDLRKAFDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKS 624
Query: 99 RRGLRQGDPLSPLLFGLCLEVFSRSMTEASRLD 1
+GLRQGDPLSP LF L +EVFS+ + SR D
Sbjct: 625 AKGLRQGDPLSPYLFVLAMEVFSKLLN--SRFD 655
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 107 bits (268), Expect = 1e-21
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PR M+KVDLKKAFD+V W F+ +AL P+++ WIH+CI+T S+++S+NG GFF
Sbjct: 446 PRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFR 505
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSR 28
+GLRQGDPLSP LF L +EVFS+
Sbjct: 506 STKGLRQGDPLSPYLFVLAMEVFSK 530
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 107 bits (268), Expect = 1e-21
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PR M+KVDLKKAFD+V W F+ +AL P+++ WIH+CI+T S+++S+NG GFF
Sbjct: 446 PRGMLKVDLKKAFDSVKWEFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFR 505
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSR 28
+GLRQGDPLSP LF L +EVFS+
Sbjct: 506 STKGLRQGDPLSPYLFVLAMEVFSK 530
>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
gi|346683183|ref|YP_004842114.1| hypothetical protein
BemaM_p069 [Beta macrocarpa]
gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
hypothetical protein [Beta macrocarpa]
Length = 238
Score = 107 bits (266), Expect = 2e-21
Identities = 48/89 (53%), Positives = 63/89 (70%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRCMIKVDL+KA+D+++W FL L GFP QF WI EC++TVSYS+ LNG F
Sbjct: 43 PRCMIKVDLRKAYDSIEWSFLQCMLSELGFPSQFITWIMECVTTVSYSILLNGKPTTPFP 102
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSRSMTE 16
++G+RQGDP+SP LF + +E SR + E
Sbjct: 103 SKKGVRQGDPMSPFLFAIGMEYLSRCLLE 131
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 106 bits (264), Expect = 4e-21
Identities = 49/84 (58%), Positives = 63/84 (75%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PR M+KVDLKKAFD+V W F+++AL P++F WI +CIST +++VS+NGG GFF
Sbjct: 586 PRGMLKVDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFK 645
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFS 31
+GLRQGDPLSP LF L +E FS
Sbjct: 646 STKGLRQGDPLSPYLFVLAMEAFS 669
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 105 bits (263), Expect = 5e-21
Identities = 47/91 (51%), Positives = 62/91 (68%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC +K+D+ KAFD+V W FL++ L FP+ FC WI CIST ++SV +NG L GFF
Sbjct: 165 PRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFG 224
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSRSMTEAS 10
+RGLRQG LSP LF +C+ V S + A+
Sbjct: 225 SKRGLRQGCALSPYLFVICMNVLSHMIDVAA 255
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 105 bits (262), Expect = 6e-21
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PR M+KVDL+KAFD++ W F++SAL G P +F WI +CIST ++SV +NG GFF
Sbjct: 539 PRGMLKVDLRKAFDSIRWDFIISALKAIGIPDRFVYWITQCISTPTFSVCVNGNTGGFFK 598
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFS 31
RGLRQG+PLSP LF L +EVFS
Sbjct: 599 STRGLRQGNPLSPFLFVLAMEVFS 622
>ref|XP_003633775.1| PREDICTED: uncharacterized protein LOC100854020 [Vitis vinifera]
Length = 1210
Score = 103 bits (258), Expect = 2e-20
Identities = 47/81 (58%), Positives = 61/81 (75%)
Frame = -3
Query: 273 MIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSGRR 94
+ K+D+KKA+D VDW FL++ L GF +++C WI C+STVS+SVS+NG GFF G R
Sbjct: 210 LCKLDIKKAYDHVDWSFLLAVLGKMGFGRRWCSWIKWCLSTVSFSVSVNGSPMGFFQGSR 269
Query: 93 GLRQGDPLSPLLFGLCLEVFS 31
GLRQGDPLSP LF + +E FS
Sbjct: 270 GLRQGDPLSPYLFIIVMEAFS 290
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 102 bits (254), Expect = 5e-20
Identities = 47/91 (51%), Positives = 61/91 (67%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC +K+D+ KAFD+V W FL++ L FP+ F WI CIST ++SV +NG L GFF
Sbjct: 889 PRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFG 948
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSRSMTEAS 10
RGLRQG LSP LF +C+ V S + EA+
Sbjct: 949 SSRGLRQGCALSPYLFVICMNVLSHMIDEAA 979
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 102 bits (253), Expect = 7e-20
Identities = 45/90 (50%), Positives = 64/90 (71%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
RC IK+D+ KAFD+V W FL++ GFP++F WI+ CI+T S+SV +NG L G+F
Sbjct: 593 RCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQS 652
Query: 99 RRGLRQGDPLSPLLFGLCLEVFSRSMTEAS 10
RGLRQG LSP LF +C++V S+ + +A+
Sbjct: 653 SRGLRQGCALSPYLFVICMDVLSKMLDKAA 682
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 102 bits (253), Expect = 7e-20
Identities = 49/87 (56%), Positives = 60/87 (68%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC+IKVD++KA+D+V+W FL S L GFP F WI C+ TVSYS+ LNG F
Sbjct: 580 PRCVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFD 639
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSRSM 22
++GLRQGDPLSP LF L +E SR M
Sbjct: 640 AQKGLRQGDPLSPFLFALSMEYLSRCM 666
>gb|AAD22330.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 631
Score = 102 bits (253), Expect = 7e-20
Identities = 46/91 (50%), Positives = 62/91 (68%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC +K+D+ KAFD+V W FL++ L FP++ WI CIST ++SV +NG L GFF
Sbjct: 162 PRCAMKIDISKAFDSVQWQFLLNTLEALNFPEKIRHWIKLCISTATFSVQVNGELAGFFG 221
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFSRSMTEAS 10
+RGLRQG LSP LF +C+ V S + EA+
Sbjct: 222 NKRGLRQGCALSPYLFVICMNVLSHMIDEAA 252
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 101 bits (251), Expect = 1e-19
Identities = 45/90 (50%), Positives = 62/90 (68%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
RC IK+D+ KAFD+V W FL + LV F F WI+ CI+T S+SV +NG L G+F
Sbjct: 240 RCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQS 299
Query: 99 RRGLRQGDPLSPLLFGLCLEVFSRSMTEAS 10
+RGLRQG LSP LF +C++V S+ + +A+
Sbjct: 300 KRGLRQGCSLSPYLFVICMDVLSKMLDKAA 329
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 101 bits (251), Expect = 1e-19
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
R M+K+DL+KAFDTV W F+ + P+ F W+ C+ T +SVS+NG L G+F G
Sbjct: 40 RAMLKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKG 99
Query: 99 RRGLRQGDPLSPLLFGLCLEVFSRSM 22
RRGLRQGDPLSP LF + +EV SR +
Sbjct: 100 RRGLRQGDPLSPYLFIMSMEVLSRML 125
>gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 100 bits (249), Expect = 2e-19
Identities = 46/84 (54%), Positives = 61/84 (72%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
R M+K+DL+KAFD+V W F++SAL P++F WI++CIST +SVS+NG FF
Sbjct: 132 RGMLKIDLRKAFDSVRWDFIVSALRALAIPERFINWINQCISTSFFSVSVNGSNCDFFKS 191
Query: 99 RRGLRQGDPLSPLLFGLCLEVFSR 28
+GLRQGDPLSP F L +EVFS+
Sbjct: 192 TKGLRQGDPLSPYFFVLAIEVFSK 215
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 100 bits (248), Expect = 3e-19
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = -3
Query: 282 PRCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFS 103
PRC VD+ KA DTV+W F+++ L + P GWI CIS+ +SV +NG L GFF+
Sbjct: 413 PRCTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFA 472
Query: 102 GRRGLRQGDPLSPLLFGLCLEVFS 31
RRGLRQGDPLSP LF + +EV S
Sbjct: 473 RRRGLRQGDPLSPYLFVIAMEVLS 496
>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 100 bits (248), Expect = 3e-19
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
R M+KVDL+KAFD+V W F++SA P++F WI++CIST +SV +NG GFF
Sbjct: 588 RGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKS 647
Query: 99 RRGLRQGDPLSPLLFGLCLEVFS 31
+GLRQGDPLSP LF L +EVFS
Sbjct: 648 NKGLRQGDPLSPYLFVLAMEVFS 670
>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 893
Score = 100 bits (248), Expect = 3e-19
Identities = 47/83 (56%), Positives = 60/83 (72%)
Frame = -3
Query: 279 RCMIKVDLKKAFDTVDWGFLMSALVGYGFPQQFCGWIHECISTVSYSVSLNGGLYGFFSG 100
R M+KVDL+KAFD+V W F++SA P++F WI++CIST +SV +NG GFF
Sbjct: 588 RGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKS 647
Query: 99 RRGLRQGDPLSPLLFGLCLEVFS 31
+GLRQGDPLSP LF L +EVFS
Sbjct: 648 NKGLRQGDPLSPYLFVLAMEVFS 670