BLASTX nr result
ID: Zingiber24_contig00041663
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041663
(397 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006343414.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ... 73 3e-11
ref|XP_006467985.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 70 4e-10
ref|XP_006449093.1| hypothetical protein CICLE_v10014587mg [Citr... 70 4e-10
ref|XP_006383945.1| hypothetical protein POPTR_0004s02170g [Popu... 69 8e-10
ref|XP_002305614.2| tyrosyl-DNA phosphodiesterase-related family... 69 8e-10
ref|XP_004234489.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 68 1e-09
gb|EMJ14801.1| hypothetical protein PRUPE_ppa002421mg [Prunus pe... 67 2e-09
ref|XP_004293258.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 67 2e-09
gb|EEC82174.1| hypothetical protein OsI_26284 [Oryza sativa Indi... 66 4e-09
ref|XP_004977325.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 65 9e-09
ref|XP_003562996.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 65 9e-09
ref|NP_001059844.1| Os07g0530100 [Oryza sativa Japonica Group] g... 65 1e-08
ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 65 1e-08
emb|CBI23170.3| unnamed protein product [Vitis vinifera] 65 1e-08
ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ric... 64 2e-08
ref|XP_006657783.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-l... 63 4e-08
gb|EMT19519.1| Tyrosyl-DNA phosphodiesterase 1 [Aegilops tauschii] 63 4e-08
tpg|DAA62969.1| TPA: hypothetical protein ZEAMMB73_115946 [Zea m... 62 8e-08
ref|XP_002462951.1| hypothetical protein SORBIDRAFT_02g035180 [S... 62 8e-08
ref|NP_001169273.1| hypothetical protein [Zea mays] gi|224028313... 62 8e-08
>ref|XP_006343414.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase
1-like, partial [Solanum tuberosum]
Length = 652
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -3
Query: 368 MTGGGSVRLATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQ 189
M G ++L TL W+G ++SS+VI Y D PWSWD+RYTKKD YGQ
Sbjct: 579 MHEGKKIKLVTLAWQGKGNDDSSEVIKLPVPYELPPKPYSPEDIPWSWDRRYTKKDIYGQ 638
Query: 188 VWPRRVHLHVDQ 153
VWPR V ++ +Q
Sbjct: 639 VWPRXVKIYTNQ 650
>ref|XP_006467985.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Citrus sinensis]
Length = 636
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -3
Query: 347 RLATLCWKGNNP-NESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRV 171
+L TL W G++ SS+V+ Y S D PWSWDKRYTKKD YGQVWPR V
Sbjct: 569 KLVTLTWHGSSDAGASSEVVYLPVPYELPPQRYSSEDVPWSWDKRYTKKDVYGQVWPRHV 628
Query: 170 HLHVDQD 150
L+ QD
Sbjct: 629 QLYAFQD 635
>ref|XP_006449093.1| hypothetical protein CICLE_v10014587mg [Citrus clementina]
gi|557551704|gb|ESR62333.1| hypothetical protein
CICLE_v10014587mg [Citrus clementina]
Length = 636
Score = 69.7 bits (169), Expect = 4e-10
Identities = 34/67 (50%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = -3
Query: 347 RLATLCWKGNNP-NESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRV 171
+L TL W G++ SS+V+ Y S D PWSWDKRYTKKD YGQVWPR V
Sbjct: 569 KLVTLTWHGSSDAGASSEVVYLPVPYELPPQRYSSEDVPWSWDKRYTKKDVYGQVWPRHV 628
Query: 170 HLHVDQD 150
L+ QD
Sbjct: 629 QLYAFQD 635
>ref|XP_006383945.1| hypothetical protein POPTR_0004s02170g [Populus trichocarpa]
gi|550340131|gb|ERP61742.1| hypothetical protein
POPTR_0004s02170g [Populus trichocarpa]
Length = 647
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = -3
Query: 344 LATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRVHL 165
L TL W+G + + +SKVI Y S D PWSWD+RY+KKD YGQVWPR V L
Sbjct: 584 LVTLKWQGTS-DSASKVIPLPVPYELPPIPYSSEDVPWSWDRRYSKKDVYGQVWPRTVQL 642
Query: 164 HVDQD 150
+ QD
Sbjct: 643 YTSQD 647
>ref|XP_002305614.2| tyrosyl-DNA phosphodiesterase-related family protein [Populus
trichocarpa] gi|550340130|gb|EEE86125.2| tyrosyl-DNA
phosphodiesterase-related family protein [Populus
trichocarpa]
Length = 608
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/65 (50%), Positives = 40/65 (61%)
Frame = -3
Query: 344 LATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRVHL 165
L TL W+G + + +SKVI Y S D PWSWD+RY+KKD YGQVWPR V L
Sbjct: 545 LVTLKWQGTS-DSASKVIPLPVPYELPPIPYSSEDVPWSWDRRYSKKDVYGQVWPRTVQL 603
Query: 164 HVDQD 150
+ QD
Sbjct: 604 YTSQD 608
>ref|XP_004234489.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Solanum
lycopersicum]
Length = 599
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/61 (49%), Positives = 37/61 (60%)
Frame = -3
Query: 359 GGSVRLATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWP 180
G ++L TL W+G ++SS+VI Y D PWSWD+RYTKKD YGQVWP
Sbjct: 539 GKKIKLVTLAWQGKGNDDSSEVIKLPVAYELPPKPYSLEDIPWSWDRRYTKKDIYGQVWP 598
Query: 179 R 177
R
Sbjct: 599 R 599
>gb|EMJ14801.1| hypothetical protein PRUPE_ppa002421mg [Prunus persica]
Length = 674
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = -3
Query: 344 LATLCWKGN-NPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRVH 168
L TL W GN N + SS+VI Y + D PWSWD+RY KKD YGQVWPR V
Sbjct: 608 LVTLNWHGNRNSDSSSEVIKLPVPYELPPQPYTTEDVPWSWDRRYNKKDVYGQVWPRHVQ 667
Query: 167 LHVDQ 153
L+ Q
Sbjct: 668 LYASQ 672
>ref|XP_004293258.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Fragaria vesca
subsp. vesca]
Length = 641
Score = 67.0 bits (162), Expect = 2e-09
Identities = 32/66 (48%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Frame = -3
Query: 356 GSVRLATLCWKGN-NPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWP 180
G +L TL W+GN N + SS+V+ Y + D PWSWD+RYTKKD YG VWP
Sbjct: 569 GRNKLVTLNWQGNRNTDSSSEVVALPVPYELPPQPYTAQDVPWSWDRRYTKKDVYGLVWP 628
Query: 179 RRVHLH 162
R+V L+
Sbjct: 629 RQVQLY 634
>gb|EEC82174.1| hypothetical protein OsI_26284 [Oryza sativa Indica Group]
Length = 843
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Frame = -3
Query: 392 QENSSSGYMTGGGSVR--LATLCWKGNNPNE-SSKVIXXXXXXXXXXXXYDSSDEPWSWD 222
+ NS+ + G ++ L TLCWK + E S+++I Y + D+PWSWD
Sbjct: 595 KNNSNLNNLAPGKEIKTKLVTLCWKSDEEKEQSTEIIRLPVPYQLPPKPYGTEDDPWSWD 654
Query: 221 KRYTKKDAYGQVWPR 177
KRYTKKD YG VWPR
Sbjct: 655 KRYTKKDVYGSVWPR 669
>ref|XP_004977325.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like isoform X2 [Setaria
italica]
Length = 671
Score = 65.1 bits (157), Expect = 9e-09
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -3
Query: 347 RLATLCWKGNNPNE-SSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPR 177
+L TLCWKG+ E S+K + Y + D PWSWD+RYTKKD YG VWPR
Sbjct: 612 KLVTLCWKGDEEKEPSTKTVRLPVPYQLPPQPYGTEDVPWSWDRRYTKKDVYGSVWPR 669
>ref|XP_003562996.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Brachypodium
distachyon]
Length = 671
Score = 65.1 bits (157), Expect = 9e-09
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Frame = -3
Query: 395 QQENSSSGYMTGGGSVR--LATLCWKGNNPNE-SSKVIXXXXXXXXXXXXYDSSDEPWSW 225
++ +S+ G +T G +++ L TLCWK + E S++VI Y D PWSW
Sbjct: 594 EKNHSNLGNLTLGKTIKTKLVTLCWKDDEEKEPSAEVIRLPVPYQLPPQLYGPEDVPWSW 653
Query: 224 DKRYTKKDAYGQVWPR 177
D+RYTKKD YG VWPR
Sbjct: 654 DRRYTKKDVYGAVWPR 669
>ref|NP_001059844.1| Os07g0530100 [Oryza sativa Japonica Group]
gi|33146648|dbj|BAC79984.1| putative tyrosyl-DNA
phosphodiesterase [Oryza sativa Japonica Group]
gi|113611380|dbj|BAF21758.1| Os07g0530100 [Oryza sativa
Japonica Group] gi|215697362|dbj|BAG91356.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222637174|gb|EEE67306.1| hypothetical protein
OsJ_24533 [Oryza sativa Japonica Group]
Length = 671
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = -3
Query: 392 QENSSSGYMTGGGSVR--LATLCWKGNNPNE-SSKVIXXXXXXXXXXXXYDSSDEPWSWD 222
+ NS+ + G ++ L TLCWK + E S+++I Y + D PWSWD
Sbjct: 595 KNNSNLNNLAPGKEIKTKLVTLCWKSDEEKEQSTEIIRLPVPYQLPPKPYGTEDVPWSWD 654
Query: 221 KRYTKKDAYGQVWPR 177
KRYTKKD YG VWPR
Sbjct: 655 KRYTKKDVYGSVWPR 669
>ref|XP_002265078.2| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Vitis vinifera]
Length = 621
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 347 RLATLCWKGNNPNESS-KVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRV 171
+L TL W+GN ++SS +VI Y S D PWSWD+RY KKD GQVWPR V
Sbjct: 554 KLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHV 613
Query: 170 HLHVDQD 150
L+ D
Sbjct: 614 QLYSSPD 620
>emb|CBI23170.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = -3
Query: 347 RLATLCWKGNNPNESS-KVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRV 171
+L TL W+GN ++SS +VI Y S D PWSWD+RY KKD GQVWPR V
Sbjct: 611 KLVTLTWEGNRSSDSSSEVIPLPVPYELPPKQYSSEDVPWSWDRRYYKKDVCGQVWPRHV 670
Query: 170 HLHVDQD 150
L+ D
Sbjct: 671 QLYSSPD 677
>ref|XP_002518536.1| tyrosyl-DNA phosphodiesterase, putative [Ricinus communis]
gi|223542381|gb|EEF43923.1| tyrosyl-DNA
phosphodiesterase, putative [Ricinus communis]
Length = 665
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/65 (49%), Positives = 38/65 (58%)
Frame = -3
Query: 344 LATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPRRVHL 165
L TL W+G + SS+VI Y S D PWSWD+RY+KKD YGQVWPR V L
Sbjct: 601 LVTLMWQGPK-DPSSQVIPLPVPYELPPQPYSSEDVPWSWDRRYSKKDVYGQVWPRLVQL 659
Query: 164 HVDQD 150
+ D
Sbjct: 660 YTSLD 664
>ref|XP_006657783.1| PREDICTED: tyrosyl-DNA phosphodiesterase 1-like [Oryza brachyantha]
Length = 664
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = -3
Query: 347 RLATLCWKGNNPNE-SSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPR 177
+L TLCWK + E S+++I Y++ D PWSWD+RYTKKD YG VWPR
Sbjct: 605 KLVTLCWKSADEKEPSTEIIRLPVPYQLPPKLYETEDVPWSWDRRYTKKDVYGSVWPR 662
>gb|EMT19519.1| Tyrosyl-DNA phosphodiesterase 1 [Aegilops tauschii]
Length = 711
Score = 63.2 bits (152), Expect = 4e-08
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = -3
Query: 347 RLATLCWKGNNPNE-SSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPR 177
+L TLCWKG+ + S++V+ Y D PWSWD+RYTKKD YG VWPR
Sbjct: 652 KLVTLCWKGDEEKDPSAEVVRLPVPYQVPPQLYGPEDVPWSWDRRYTKKDVYGSVWPR 709
>tpg|DAA62969.1| TPA: hypothetical protein ZEAMMB73_115946 [Zea mays]
Length = 140
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = -3
Query: 347 RLATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPR 177
+L TLCWKG+ E ++ Y + D PWSWD+RYTKKD YG VWPR
Sbjct: 84 KLVTLCWKGDE--EDPSIVRLPVPYQLPPQPYGTQDVPWSWDRRYTKKDVYGSVWPR 138
>ref|XP_002462951.1| hypothetical protein SORBIDRAFT_02g035180 [Sorghum bicolor]
gi|241926328|gb|EER99472.1| hypothetical protein
SORBIDRAFT_02g035180 [Sorghum bicolor]
Length = 689
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = -3
Query: 347 RLATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPR 177
+L TLCWKG+ E ++ Y + D PWSWD+RYTKKD YG VWPR
Sbjct: 633 KLVTLCWKGDE--EDPSIVKLPVPYQLPPQPYGTQDVPWSWDRRYTKKDVYGSVWPR 687
>ref|NP_001169273.1| hypothetical protein [Zea mays] gi|224028313|gb|ACN33232.1| unknown
[Zea mays] gi|414886956|tpg|DAA62970.1| TPA:
hypothetical protein ZEAMMB73_115946 [Zea mays]
gi|414886957|tpg|DAA62971.1| TPA: hypothetical protein
ZEAMMB73_115946 [Zea mays]
Length = 665
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/57 (47%), Positives = 33/57 (57%)
Frame = -3
Query: 347 RLATLCWKGNNPNESSKVIXXXXXXXXXXXXYDSSDEPWSWDKRYTKKDAYGQVWPR 177
+L TLCWKG+ E ++ Y + D PWSWD+RYTKKD YG VWPR
Sbjct: 609 KLVTLCWKGDE--EDPSIVRLPVPYQLPPQPYGTQDVPWSWDRRYTKKDVYGSVWPR 663