BLASTX nr result

ID: Zingiber24_contig00041452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00041452
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006302677.1| hypothetical protein CARUB_v10020785mg [Caps...    59   7e-07
ref|XP_006390726.1| hypothetical protein EUTSA_v10018999mg [Eutr...    59   9e-07
ref|XP_004496372.1| PREDICTED: uncharacterized membrane protein ...    58   1e-06
ref|NP_565028.1| SNARE associated Golgi protein family [Arabidop...    57   2e-06
ref|NP_001185376.1| SNARE associated Golgi protein family [Arabi...    57   2e-06
ref|XP_002887402.1| hypothetical protein ARALYDRAFT_476324 [Arab...    57   2e-06
ref|XP_006376293.1| hypothetical protein POPTR_0013s11730g [Popu...    56   6e-06
ref|XP_002327243.1| predicted protein [Populus trichocarpa]            56   6e-06
ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein ...    55   1e-05

>ref|XP_006302677.1| hypothetical protein CARUB_v10020785mg [Capsella rubella]
           gi|482571387|gb|EOA35575.1| hypothetical protein
           CARUB_v10020785mg [Capsella rubella]
          Length = 272

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/65 (52%), Positives = 39/65 (60%)
 Frame = +2

Query: 170 MAQFRIAASPRDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCC 349
           MA  RI    RDEE    S +DDSP+ KR   D     L+RWE A +  VFLVFS GLCC
Sbjct: 1   MAPTRILT--RDEELGAVSDDDDSPSGKRSKLDR--FPLSRWELAVSLGVFLVFSSGLCC 56

Query: 350 IFFTM 364
           I+ TM
Sbjct: 57  IYMTM 61


>ref|XP_006390726.1| hypothetical protein EUTSA_v10018999mg [Eutrema salsugineum]
           gi|557087160|gb|ESQ28012.1| hypothetical protein
           EUTSA_v10018999mg [Eutrema salsugineum]
          Length = 272

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/65 (52%), Positives = 39/65 (60%)
 Frame = +2

Query: 170 MAQFRIAASPRDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCC 349
           MA  RI    RDEE    S +DDSP+ KR   D     L+RWE A +  VFLVFS GLCC
Sbjct: 1   MAPARILT--RDEELGAISDDDDSPSGKRSKLDR--FPLSRWELAVSLGVFLVFSSGLCC 56

Query: 350 IFFTM 364
           I+ TM
Sbjct: 57  IYMTM 61


>ref|XP_004496372.1| PREDICTED: uncharacterized membrane protein At4g09580-like [Cicer
           arietinum]
          Length = 273

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 33/65 (50%), Positives = 39/65 (60%)
 Frame = +2

Query: 170 MAQFRIAASPRDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCC 349
           MA  R   + +DEES G   EDDSPTSK+P  +     L  WE A A  VF VFS+GL C
Sbjct: 1   MAAPRNLTALKDEES-GMELEDDSPTSKKPKSER--FPLNTWEFAVAVAVFFVFSIGLFC 57

Query: 350 IFFTM 364
           I+ TM
Sbjct: 58  IYLTM 62


>ref|NP_565028.1| SNARE associated Golgi protein family [Arabidopsis thaliana]
           gi|12324535|gb|AAG52221.1|AC021665_4 unknown protein;
           51119-52286 [Arabidopsis thaliana]
           gi|18700127|gb|AAL77675.1| At1g71940/F17M19_9
           [Arabidopsis thaliana] gi|20453395|gb|AAM19936.1|
           At1g71940/F17M19_9 [Arabidopsis thaliana]
           gi|21593331|gb|AAM65280.1| unknown [Arabidopsis
           thaliana] gi|332197134|gb|AEE35255.1| SNARE associated
           Golgi protein family [Arabidopsis thaliana]
          Length = 272

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/65 (52%), Positives = 39/65 (60%)
 Frame = +2

Query: 170 MAQFRIAASPRDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCC 349
           MA  RI    RDEE    S +DDSP+ KR   D     L+RWE A +  VFLVFS GLCC
Sbjct: 1   MAPTRILT--RDEELGVISDDDDSPSGKRSKLDR--FPLSRWELAVSLGVFLVFSSGLCC 56

Query: 350 IFFTM 364
           I+ TM
Sbjct: 57  IYMTM 61


>ref|NP_001185376.1| SNARE associated Golgi protein family [Arabidopsis thaliana]
           gi|332197135|gb|AEE35256.1| SNARE associated Golgi
           protein family [Arabidopsis thaliana]
          Length = 306

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/65 (52%), Positives = 39/65 (60%)
 Frame = +2

Query: 170 MAQFRIAASPRDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCC 349
           MA  RI    RDEE    S +DDSP+ KR   D     L+RWE A +  VFLVFS GLCC
Sbjct: 1   MAPTRILT--RDEELGVISDDDDSPSGKRSKLDR--FPLSRWELAVSLGVFLVFSSGLCC 56

Query: 350 IFFTM 364
           I+ TM
Sbjct: 57  IYMTM 61


>ref|XP_002887402.1| hypothetical protein ARALYDRAFT_476324 [Arabidopsis lyrata subsp.
           lyrata] gi|297333243|gb|EFH63661.1| hypothetical protein
           ARALYDRAFT_476324 [Arabidopsis lyrata subsp. lyrata]
          Length = 272

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 34/65 (52%), Positives = 39/65 (60%)
 Frame = +2

Query: 170 MAQFRIAASPRDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCC 349
           MA  RI    RDEE    S +DDSP+ KR   D     L+RWE A +  VFLVFS GLCC
Sbjct: 1   MAPTRILT--RDEELGVISDDDDSPSGKRSKLDR--FPLSRWELAVSLGVFLVFSSGLCC 56

Query: 350 IFFTM 364
           I+ TM
Sbjct: 57  IYMTM 61


>ref|XP_006376293.1| hypothetical protein POPTR_0013s11730g [Populus trichocarpa]
           gi|550325569|gb|ERP54090.1| hypothetical protein
           POPTR_0013s11730g [Populus trichocarpa]
          Length = 284

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +2

Query: 200 RDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCCIFFTM 364
           RDEE A    EDDSP++KR   +     LTRWE AAA  VFLVFS GL CI+ TM
Sbjct: 24  RDEEKA---KEDDSPSAKRSKFER--FPLTRWELAAALGVFLVFSTGLFCIYLTM 73


>ref|XP_002327243.1| predicted protein [Populus trichocarpa]
          Length = 262

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = +2

Query: 200 RDEESAGGSAEDDSPTSKRPPRDESAISLTRWEAAAAATVFLVFSVGLCCIFFTM 364
           RDEE A    EDDSP++KR   +     LTRWE AAA  VFLVFS GL CI+ TM
Sbjct: 2   RDEEKA---KEDDSPSAKRSKFER--FPLTRWELAAALGVFLVFSTGLFCIYLTM 51


>ref|XP_002271955.1| PREDICTED: uncharacterized membrane protein At4g09580 [Vitis
           vinifera] gi|296081147|emb|CBI18173.3| unnamed protein
           product [Vitis vinifera]
          Length = 279

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = +2

Query: 200 RDEESAGGSAEDDSPTSKRPP--RDESAISLTRWEAAAAATVFLVFSVGLCCIFFTM 364
           RDEE+A    EDDSPT+K+P   + +    LTRWE   A  VF+ FS+GL CI+ TM
Sbjct: 15  RDEENAN---EDDSPTTKKPAGVKIDGRFPLTRWEFTVALGVFVFFSIGLFCIYLTM 68


Top