BLASTX nr result
ID: Zingiber24_contig00041412
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041412
(224 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma ... 149 5e-34
gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helica... 149 5e-34
gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma ... 149 5e-34
gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent R... 145 4e-33
ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinu... 145 6e-33
ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor... 144 1e-32
emb|CBI36976.3| unnamed protein product [Vitis vinifera] 144 2e-32
ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor... 144 2e-32
ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Popu... 143 3e-32
ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor... 143 3e-32
ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor... 143 3e-32
ref|XP_004495890.1| PREDICTED: probable pre-mRNA-splicing factor... 142 4e-32
ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor... 142 5e-32
ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Med... 142 5e-32
gb|ESW35196.1| hypothetical protein PHAVU_001G214700g [Phaseolus... 142 6e-32
ref|NP_191790.1| RNA helicase family protein [Arabidopsis thalia... 141 8e-32
ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Caps... 141 8e-32
ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arab... 141 8e-32
ref|XP_002301528.1| pre-mRNA splicing factor ATP-dependent RNA h... 141 1e-31
gb|EMJ22755.1| hypothetical protein PRUPE_ppa002008mg [Prunus pe... 140 1e-31
>gb|EOX95336.1| RNA helicase family protein isoform 5 [Theobroma cacao]
Length = 683
Score = 149 bits (375), Expect = 5e-34
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
EDSSWCYENF+NHR +KAADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 524 EDSSWCYENFVNHRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 583
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 584 MQVAHLERTGHYL 596
>gb|EOX95334.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3
[Theobroma cacao]
Length = 746
Score = 149 bits (375), Expect = 5e-34
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
EDSSWCYENF+NHR +KAADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 566 EDSSWCYENFVNHRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 625
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 626 MQVAHLERTGHYL 638
>gb|EOX95332.1| RNA helicase family protein isoform 1 [Theobroma cacao]
Length = 725
Score = 149 bits (375), Expect = 5e-34
Identities = 68/73 (93%), Positives = 72/73 (98%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
EDSSWCYENF+NHR +KAADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 566 EDSSWCYENFVNHRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 625
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 626 MQVAHLERTGHYL 638
>gb|EXB55979.1| putative pre-mRNA-splicing factor ATP-dependent RNA helicase [Morus
notabilis]
Length = 922
Score = 145 bits (367), Expect = 4e-33
Identities = 66/73 (90%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENF+NHR +K+ADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 763 EDPSWCYENFVNHRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 822
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 823 MQVAHLERTGHYL 835
>ref|XP_002515245.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223545725|gb|EEF47229.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 731
Score = 145 bits (366), Expect = 6e-33
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENFINHR +KAADNVRQQLVRIM RFN+KLCSTDF+SRDYY+NIRKAMLAGYF
Sbjct: 572 EDPSWCYENFINHRALKAADNVRQQLVRIMTRFNLKLCSTDFNSRDYYVNIRKAMLAGYF 631
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 632 MQVAHLERTGHYL 644
>ref|XP_003518717.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 722
Score = 144 bits (363), Expect = 1e-32
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCY+NF+NHR +K+ADNVRQQLVRIMARFN+KLCSTDF+SRDYY+NIRKAMLAGYF
Sbjct: 563 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYF 622
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 623 MQVAHLERTGHYL 635
>emb|CBI36976.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 144 bits (362), Expect = 2e-32
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENF+N R +KAADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 528 EDPSWCYENFVNQRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 587
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 588 MQVAHLERTGHYL 600
>ref|XP_002278247.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Vitis vinifera] gi|147787427|emb|CAN64445.1|
hypothetical protein VITISV_036050 [Vitis vinifera]
Length = 728
Score = 144 bits (362), Expect = 2e-32
Identities = 66/73 (90%), Positives = 70/73 (95%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENF+N R +KAADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 569 EDPSWCYENFVNQRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 628
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 629 MQVAHLERTGHYL 641
>ref|XP_002320963.2| hypothetical protein POPTR_0014s11320g [Populus trichocarpa]
gi|550323982|gb|EEE99278.2| hypothetical protein
POPTR_0014s11320g [Populus trichocarpa]
Length = 729
Score = 143 bits (360), Expect = 3e-32
Identities = 65/73 (89%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENFINHR +KAADNVRQQLVRIMARFN++LCSTDF+SRDYYINIRKA+LAGYF
Sbjct: 570 EDPSWCYENFINHRALKAADNVRQQLVRIMARFNLRLCSTDFNSRDYYINIRKAILAGYF 629
Query: 184 MQVAHLERTGHYL 222
MQVAHLER+GHYL
Sbjct: 630 MQVAHLERSGHYL 642
>ref|XP_003554559.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform 1 [Glycine max]
Length = 721
Score = 143 bits (360), Expect = 3e-32
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCY+NF+NHR +K+ADNVRQQLVRIM+RFN+KLCSTDF+SRDYY+NIRKAMLAGYF
Sbjct: 562 EDPSWCYDNFVNHRALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYF 621
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 622 MQVAHLERTGHYL 634
>ref|XP_003521600.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Glycine max]
Length = 720
Score = 143 bits (360), Expect = 3e-32
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCY+NF+NHR +K+ADNVRQQLVRIM+RFN+KLCSTDF+SRDYY+NIRKAMLAGYF
Sbjct: 561 EDPSWCYDNFVNHRALKSADNVRQQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLAGYF 620
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 621 MQVAHLERTGHYL 633
>ref|XP_004495890.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cicer arietinum]
Length = 721
Score = 142 bits (359), Expect = 4e-32
Identities = 64/73 (87%), Positives = 72/73 (98%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED+SWCY+NF+N+R +K+ADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 562 EDASWCYDNFVNNRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKAMLAGYF 621
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 622 MQVAHLERTGHYL 634
>ref|XP_004135980.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cucumis sativus]
gi|449515243|ref|XP_004164659.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
[Cucumis sativus]
Length = 732
Score = 142 bits (358), Expect = 5e-32
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENFINHR MKAADNVR+QLVRIM+RFN+KLCSTDF++R+YY+NIRKAML+GYF
Sbjct: 573 EDQSWCYENFINHRAMKAADNVREQLVRIMSRFNLKLCSTDFNNREYYVNIRKAMLSGYF 632
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 633 MQVAHLERTGHYL 645
>ref|XP_003591371.1| ATP-dependent RNA helicase-like protein [Medicago truncatula]
gi|355480419|gb|AES61622.1| ATP-dependent RNA
helicase-like protein [Medicago truncatula]
Length = 721
Score = 142 bits (358), Expect = 5e-32
Identities = 63/73 (86%), Positives = 72/73 (98%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED+SWCY+NF+N+R +K+ADNVRQQLVRIMARFN+KLCSTDF+SRDYY+NIRKAMLAGYF
Sbjct: 562 EDASWCYDNFVNNRALKSADNVRQQLVRIMARFNLKLCSTDFNSRDYYVNIRKAMLAGYF 621
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 622 MQVAHLERTGHYL 634
>gb|ESW35196.1| hypothetical protein PHAVU_001G214700g [Phaseolus vulgaris]
Length = 724
Score = 142 bits (357), Expect = 6e-32
Identities = 63/73 (86%), Positives = 70/73 (95%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCY+NF+NHR +K+ADNVRQQLVRIMARFN+K CSTDF+SRDYY+NIRKAMLAGYF
Sbjct: 565 EDPSWCYDNFVNHRALKSADNVRQQLVRIMARFNLKQCSTDFNSRDYYVNIRKAMLAGYF 624
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 625 MQVAHLERTGHYL 637
>ref|NP_191790.1| RNA helicase family protein [Arabidopsis thaliana]
gi|7340702|emb|CAB82945.1| ATP-dependent RNA
helicase-like protein [Arabidopsis thaliana]
gi|21539575|gb|AAM53340.1| ATP-dependent RNA
helicase-like protein [Arabidopsis thaliana]
gi|34098783|gb|AAQ56774.1| At3g62310 [Arabidopsis
thaliana] gi|332646816|gb|AEE80337.1| RNA helicase
family protein [Arabidopsis thaliana]
Length = 726
Score = 141 bits (356), Expect = 8e-32
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED +WCYENFIN+R MK+ADNVRQQLVRIM+RFN+K+CSTDF+SRDYYINIRKAMLAGYF
Sbjct: 566 EDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYF 625
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 626 MQVAHLERTGHYL 638
>ref|XP_006290650.1| hypothetical protein CARUB_v10016742mg [Capsella rubella]
gi|482559357|gb|EOA23548.1| hypothetical protein
CARUB_v10016742mg [Capsella rubella]
Length = 725
Score = 141 bits (356), Expect = 8e-32
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED +WCYENFIN+R MK+ADNVRQQLVRIM+RFN+K+CSTDF+SRDYYINIRKAMLAGYF
Sbjct: 566 EDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYF 625
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 626 MQVAHLERTGHYL 638
>ref|XP_002878448.1| hypothetical protein ARALYDRAFT_349295 [Arabidopsis lyrata subsp.
lyrata] gi|297324286|gb|EFH54707.1| hypothetical protein
ARALYDRAFT_349295 [Arabidopsis lyrata subsp. lyrata]
Length = 686
Score = 141 bits (356), Expect = 8e-32
Identities = 64/73 (87%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED +WCYENFIN+R MK+ADNVRQQLVRIM+RFN+K+CSTDF+SRDYYINIRKAMLAGYF
Sbjct: 526 EDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYINIRKAMLAGYF 585
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 586 MQVAHLERTGHYL 598
>ref|XP_002301528.1| pre-mRNA splicing factor ATP-dependent RNA helicase family protein
[Populus trichocarpa] gi|222843254|gb|EEE80801.1|
pre-mRNA splicing factor ATP-dependent RNA helicase
family protein [Populus trichocarpa]
Length = 728
Score = 141 bits (355), Expect = 1e-31
Identities = 63/73 (86%), Positives = 71/73 (97%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENF+NHR +KAADNVRQQLVRIMARFN+KLCSTDF+SRDYYINIRK++LAGYF
Sbjct: 569 EDPSWCYENFVNHRALKAADNVRQQLVRIMARFNLKLCSTDFNSRDYYINIRKSILAGYF 628
Query: 184 MQVAHLERTGHYL 222
MQVAHLE++GHYL
Sbjct: 629 MQVAHLEQSGHYL 641
>gb|EMJ22755.1| hypothetical protein PRUPE_ppa002008mg [Prunus persica]
Length = 730
Score = 140 bits (354), Expect = 1e-31
Identities = 64/73 (87%), Positives = 70/73 (95%)
Frame = +1
Query: 4 EDSSWCYENFINHRTMKAADNVRQQLVRIMARFNMKLCSTDFSSRDYYINIRKAMLAGYF 183
ED SWCYENF+N R +K+ADNVRQQLVRIMARF++KLCSTDF+SRDYYINIRKAMLAGYF
Sbjct: 572 EDPSWCYENFVNQRALKSADNVRQQLVRIMARFSLKLCSTDFNSRDYYINIRKAMLAGYF 631
Query: 184 MQVAHLERTGHYL 222
MQVAHLERTGHYL
Sbjct: 632 MQVAHLERTGHYL 644