BLASTX nr result

ID: Zingiber24_contig00041272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00041272
         (257 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor...    81   1e-13
ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citr...    81   1e-13
ref|XP_004306870.1| PREDICTED: probable pre-mRNA-splicing factor...    78   1e-12
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu...    78   1e-12
ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor...    77   2e-12
ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...    77   2e-12
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...    77   2e-12
emb|CBI31157.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...    77   2e-12
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]    77   2e-12
ref|XP_004243751.1| PREDICTED: probable pre-mRNA-splicing factor...    77   3e-12
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...    77   3e-12
gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus...    76   5e-12
ref|XP_006374312.1| ATP-dependent RNA helicase family protein [P...    75   7e-12
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor...    75   7e-12
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216...    75   7e-12
ref|XP_002331832.1| predicted protein [Populus trichocarpa]            75   7e-12
ref|XP_006359631.1| PREDICTED: probable pre-mRNA-splicing factor...    75   9e-12
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m...    75   9e-12
ref|XP_004296476.1| PREDICTED: probable pre-mRNA-splicing factor...    75   1e-11

>ref|XP_006466902.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform X1 [Citrus sinensis]
           gi|568825052|ref|XP_006466903.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X2 [Citrus sinensis]
          Length = 1176

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEYFS +S VC ELE+H+G GDKVLAEFIT+LGRN E VDEF+SKLKE GA
Sbjct: 13  LEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63


>ref|XP_006425547.1| hypothetical protein CICLE_v10024740mg [Citrus clementina]
           gi|557527537|gb|ESR38787.1| hypothetical protein
           CICLE_v10024740mg [Citrus clementina]
          Length = 1176

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEYFS +S VC ELE+H+G GDKVLAEFIT+LGRN E VDEF+SKLKE GA
Sbjct: 13  LEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGA 63


>ref|XP_004306870.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Fragaria vesca subsp. vesca]
          Length = 1203

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT++GRN E+VDEF++KLKE GA
Sbjct: 11  LEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCESVDEFDAKLKEHGA 61


>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1177

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 37/51 (72%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LE+ S +S VC ELESH+G GDKVLAE+IT++GRNSE VDEF+SKLKE GA
Sbjct: 19  LEFLSLVSKVCTELESHLGFGDKVLAEYITEMGRNSETVDEFDSKLKENGA 69


>ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform X1 [Cicer arietinum]
           gi|502123536|ref|XP_004498155.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X2 [Cicer arietinum]
           gi|502123538|ref|XP_004498156.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X3 [Cicer arietinum]
           gi|502123540|ref|XP_004498157.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X4 [Cicer arietinum]
           gi|502123542|ref|XP_004498158.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X5 [Cicer arietinum]
           gi|502123544|ref|XP_004498159.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X6 [Cicer arietinum]
           gi|502123546|ref|XP_004498160.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X7 [Cicer arietinum]
           gi|502123548|ref|XP_004498161.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X8 [Cicer arietinum]
          Length = 1178

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELESH G+GDKVLAEFITDLG +SE V+EF++KLKE GA
Sbjct: 13  LEYLSLVSKVCTELESHTGAGDKVLAEFITDLGHSSETVEEFDAKLKENGA 63


>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Vitis vinifera]
          Length = 1172

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFITD+GR  E VDEF+SKLKE GA
Sbjct: 13  LEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 63


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform X1 [Glycine max]
           gi|571512325|ref|XP_006596566.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X2 [Glycine max]
          Length = 1203

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELESH G+GDKVLAEFIT+LGR+SE V+EF++KLKE GA
Sbjct: 13  LEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDAKLKENGA 63


>emb|CBI31157.3| unnamed protein product [Vitis vinifera]
          Length = 803

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFITD+GR  E VDEF+SKLKE GA
Sbjct: 52  LEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 102


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFITD+GR  E VDEF+SKLKE GA
Sbjct: 13  LEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 63


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/51 (72%), Positives = 42/51 (82%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFITD+GR  E VDEF+SKLKE GA
Sbjct: 13  LEYLSLVSKVCTELETHLGVGDKVLAEFITDMGRKCETVDEFDSKLKENGA 63


>ref|XP_004243751.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Solanum lycopersicum]
          Length = 1190

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 36/51 (70%), Positives = 42/51 (82%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT+LGRN   VDEF++KLKE GA
Sbjct: 13  LEYLSLISKVCSELEAHLGFGDKVLAEFITELGRNCSTVDEFDAKLKESGA 63


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like isoform X1 [Glycine max]
           gi|571539750|ref|XP_006601342.1| PREDICTED: probable
           pre-mRNA-splicing factor ATP-dependent RNA helicase-like
           isoform X2 [Glycine max]
          Length = 1197

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELESH G+GDKVLAEFIT+LGR+SE V+EF+ KLKE GA
Sbjct: 13  LEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEEFDEKLKENGA 63


>gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus vulgaris]
          Length = 1201

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELESH G+GDKVLAEFIT+LGR+SE V++F++KLKE GA
Sbjct: 13  LEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSENVEDFDAKLKENGA 63


>ref|XP_006374312.1| ATP-dependent RNA helicase family protein [Populus trichocarpa]
           gi|550322071|gb|ERP52109.1| ATP-dependent RNA helicase
           family protein [Populus trichocarpa]
          Length = 1177

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDK+LAEFIT+LGR+ E VDEF++KLKE GA
Sbjct: 14  LEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKENGA 64


>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Cucumis sativus]
          Length = 1181

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT++GR+ E+VDEF++KLKE GA
Sbjct: 9   LEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKLKENGA 59


>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
          Length = 1218

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 44/51 (86%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT++GR+ E+VDEF++KLKE GA
Sbjct: 15  LEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCESVDEFDTKLKENGA 65


>ref|XP_002331832.1| predicted protein [Populus trichocarpa]
          Length = 1171

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDK+LAEFIT+LGR+ E VDEF++KLKE GA
Sbjct: 14  LEYLSLVSKVCSELETHLGFGDKILAEFITELGRSCETVDEFDAKLKENGA 64


>ref|XP_006359631.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Solanum tuberosum]
          Length = 1174

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 36/51 (70%), Positives = 41/51 (80%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT+LGRN   VDEF+ KLKE GA
Sbjct: 13  LEYLSLISKVCSELEAHLGFGDKVLAEFITELGRNCLTVDEFDDKLKESGA 63


>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
          Length = 953

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT++GR+ E VDEF++KLKE GA
Sbjct: 15  LEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRSCETVDEFDAKLKENGA 65


>ref|XP_004296476.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
           helicase-like [Fragaria vesca subsp. vesca]
          Length = 1189

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 35/51 (68%), Positives = 43/51 (84%)
 Frame = +2

Query: 104 LEYFSWLSNVCQELESHVGSGDKVLAEFITDLGRNSEAVDEFESKLKEFGA 256
           LEY S +S VC ELE+H+G GDKVLAEFIT++GRN  +VDEF++KLKE GA
Sbjct: 11  LEYLSLVSKVCSELETHLGFGDKVLAEFITEMGRNCGSVDEFDAKLKENGA 61


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