BLASTX nr result

ID: Zingiber24_contig00041267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00041267
         (203 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium]           78   1e-12
dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris]          74   3e-11
ref|XP_006359602.1| PREDICTED: arginine decarboxylase-like [Sola...    71   2e-10
gb|AEW69809.1| Hop-interacting protein THI107 [Solanum lycopersi...    70   2e-10
emb|CBI37982.3| unnamed protein product [Vitis vinifera]               70   4e-10
ref|XP_002269030.1| PREDICTED: arginine decarboxylase [Vitis vin...    70   4e-10
ref|XP_004150135.1| PREDICTED: arginine decarboxylase-like [Cucu...    69   6e-10
gb|AAP36992.2| arginine decarboxylase [Cucumis sativus]                69   6e-10
dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum]             69   8e-10
ref|XP_004290299.1| PREDICTED: arginine decarboxylase-like [Frag...    68   1e-09
dbj|BAD74163.1| arginine decarboxylase [Malus domestica]               65   7e-09
gb|AAQ14851.1|AF321137_1 arginine decarboxylase [Nicotiana tabacum]    65   9e-09
dbj|BAG68575.1| arginine decarboxylase [Prunus persica] gi|46239...    65   9e-09
gb|AEE99192.1| arginine decarboxylase [Citrus trifoliata]              65   1e-08
ref|XP_004306445.1| PREDICTED: arginine decarboxylase-like [Frag...    64   2e-08
ref|XP_006412194.1| hypothetical protein EUTSA_v10024529mg [Eutr...    64   3e-08
dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila]      64   3e-08
ref|XP_006423501.1| hypothetical protein CICLE_v10027873mg [Citr...    63   4e-08
gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tab...    62   6e-08
gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tab...    62   6e-08

>emb|CAB64599.1| arginine decarboxylase 1 [Datura stramonium]
          Length = 724

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 36/65 (55%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSW 186
           CVDAAVSPP  Y  +WD +LPAP  F  G P +    AA      WSPDLS+ LYR+D W
Sbjct: 7   CVDAAVSPPLGYAFSWDSSLPAPEFFSSGVPPSTNETAAHTAGSHWSPDLSSALYRVDGW 66

Query: 187 GVPYF 201
           G PYF
Sbjct: 67  GAPYF 71


>dbj|BAA25685.1| arginine decarboxylase [Nicotiana sylvestris]
          Length = 621

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/65 (53%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSW 186
           CVDAAVSPP  Y   WD +LPAP IFP G P +     A      WSP  S+ LY ID W
Sbjct: 7   CVDAAVSPPPGYSFLWDSSLPAPEIFPSGVPPSTNTAVATTTTTHWSPAHSSALYSIDGW 66

Query: 187 GVPYF 201
           G PYF
Sbjct: 67  GAPYF 71


>ref|XP_006359602.1| PREDICTED: arginine decarboxylase-like [Solanum tuberosum]
          Length = 735

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSW 186
           CVDA+VSPP  Y  +WD +LPAP +F  G P      AA      WS DLS+ LYR+D W
Sbjct: 7   CVDASVSPPLGYAFSWDSSLPAPELFSSGVPPA-TNAAAVTTGSHWSTDLSSALYRVDGW 65

Query: 187 GVPYF 201
           G PYF
Sbjct: 66  GAPYF 70


>gb|AEW69809.1| Hop-interacting protein THI107 [Solanum lycopersicum]
          Length = 721

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSW 186
           CVDA+VSPP  Y  +WD +LPAP +F  G P      AA      WS DLS+ LYR+D W
Sbjct: 7   CVDASVSPPLGYAFSWDSSLPAPELFSSGVPPA-TNAAAVSTGSHWSTDLSSDLYRVDGW 65

Query: 187 GVPYF 201
           G PYF
Sbjct: 66  GAPYF 70


>emb|CBI37982.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/67 (56%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFPGGAPTTPVGDAA---DGRPVPWSPDLSAVLYRID 180
           CVDAAV+PP Y  A D +LPAP  F G    T   DAA    G    WSP LSA LYRID
Sbjct: 7   CVDAAVAPPGYAFAGDSSLPAPVPFAGDPLAT--NDAAALPTGEHSHWSPSLSADLYRID 64

Query: 181 SWGVPYF 201
            WG PYF
Sbjct: 65  GWGAPYF 71


>ref|XP_002269030.1| PREDICTED: arginine decarboxylase [Vitis vinifera]
          Length = 720

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 38/67 (56%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFPGGAPTTPVGDAA---DGRPVPWSPDLSAVLYRID 180
           CVDAAV+PP Y  A D +LPAP  F G    T   DAA    G    WSP LSA LYRID
Sbjct: 7   CVDAAVAPPGYAFAGDSSLPAPVPFAGDPLAT--NDAAALPTGEHSHWSPSLSADLYRID 64

Query: 181 SWGVPYF 201
            WG PYF
Sbjct: 65  GWGAPYF 71


>ref|XP_004150135.1| PREDICTED: arginine decarboxylase-like [Cucumis sativus]
           gi|449530702|ref|XP_004172332.1| PREDICTED: arginine
           decarboxylase-like [Cucumis sativus]
          Length = 717

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRP----VPWSPDLSAVLYR 174
           CVDAAV+PP  Y  A D +LP+  +F GG P T +  + D  P    + WSP LS+ LY+
Sbjct: 7   CVDAAVAPPPGYVFAGDSSLPSSVLFSGGPPETTIFSSPDSPPTSENMSWSPPLSSSLYK 66

Query: 175 IDSWGVPYF 201
           ID WG PYF
Sbjct: 67  IDGWGAPYF 75


>gb|AAP36992.2| arginine decarboxylase [Cucumis sativus]
          Length = 717

 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 34/69 (49%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRP----VPWSPDLSAVLYR 174
           CVDAAV+PP  Y  A D +LP+  +F GG P T +  + D  P    + WSP LS+ LY+
Sbjct: 7   CVDAAVAPPPGYVFAGDSSLPSSVLFSGGPPETTIFSSPDSPPTSENMSWSPPLSSSLYK 66

Query: 175 IDSWGVPYF 201
           ID WG PYF
Sbjct: 67  IDGWGAPYF 75


>dbj|BAD06581.1| arginine decarboxylase [Nicotiana tabacum]
          Length = 733

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 34/65 (52%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSW 186
           CVDAAVSPP  Y    D +LPAP IFP G P +     A      WSP  S+ LY ID W
Sbjct: 7   CVDAAVSPPPGYSFLGDSSLPAPEIFPSGVPPSTNTAVATTTTTHWSPAHSSALYSIDGW 66

Query: 187 GVPYF 201
           G PYF
Sbjct: 67  GAPYF 71


>ref|XP_004290299.1| PREDICTED: arginine decarboxylase-like [Fragaria vesca subsp.
           vesca]
          Length = 717

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 36/64 (56%), Positives = 39/64 (60%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSWG 189
           CVDAAV+PPSY  A D +LPAP  F G  P T    AA      WS  LS  LYRID+WG
Sbjct: 7   CVDAAVAPPSYAFAGDSSLPAPVPFSGVFPATASAAAA------WSTSLSNDLYRIDAWG 60

Query: 190 VPYF 201
            PYF
Sbjct: 61  GPYF 64


>dbj|BAD74163.1| arginine decarboxylase [Malus domestica]
          Length = 728

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 36/64 (56%), Positives = 42/64 (65%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSWG 189
           CVDAAV+PP +  A D +LPA   FPG  P T +  AAD     WSP LS+ LYRID+WG
Sbjct: 7   CVDAAVAPPGHAFAGDSSLPASP-FPGLPPAT-ITTAADNSH--WSPSLSSDLYRIDAWG 62

Query: 190 VPYF 201
            PYF
Sbjct: 63  GPYF 66


>gb|AAQ14851.1|AF321137_1 arginine decarboxylase [Nicotiana tabacum]
          Length = 721

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +1

Query: 10  CVDAAV-SPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDS 183
           CVDAAV SPP SY  + D +LPAP  F  G P T    A+      WSPDLS+ LY +D 
Sbjct: 7   CVDAAVVSPPLSYAFSRDSSLPAPEFFASGVPPTNSAAASH-----WSPDLSSALYGVDG 61

Query: 184 WGVPYF 201
           WG PYF
Sbjct: 62  WGAPYF 67


>dbj|BAG68575.1| arginine decarboxylase [Prunus persica] gi|462395707|gb|EMJ01506.1|
           hypothetical protein PRUPE_ppa002034mg [Prunus persica]
          Length = 725

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/64 (53%), Positives = 38/64 (59%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSWG 189
           CVDAAV+PP Y  A D +LPAP  F G  P T            WSP LS+ LYRID+WG
Sbjct: 7   CVDAAVAPPGYAFAGDSSLPAPP-FSGVPPATTAVTTDSSH---WSPSLSSDLYRIDAWG 62

Query: 190 VPYF 201
            PYF
Sbjct: 63  GPYF 66


>gb|AEE99192.1| arginine decarboxylase [Citrus trifoliata]
          Length = 751

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFP-----GGAPTTPVGD--------AADGRPVPWSP 150
           CVDAAV+PP+Y  +  G+LPAP   P     G +P TP+          AAD     WSP
Sbjct: 7   CVDAAVAPPAYANSPLGSLPAPPPLPLSFNSGTSPPTPMSPTSASAGSVAADVDASHWSP 66

Query: 151 DLSAVLYRIDSWGVPYF 201
             SA LY+IDSWG PYF
Sbjct: 67  SHSASLYKIDSWGAPYF 83


>ref|XP_004306445.1| PREDICTED: arginine decarboxylase-like [Fragaria vesca subsp.
           vesca]
          Length = 708

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 34/64 (53%), Positives = 37/64 (57%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSWG 189
           CVDAAV PPS+  A D +LPAP  F G  PTT            WS  LS  LYRID+WG
Sbjct: 7   CVDAAVPPPSHAFAGDSSLPAPDPFSGVFPTTASA---------WSTSLSNDLYRIDAWG 57

Query: 190 VPYF 201
            PYF
Sbjct: 58  GPYF 61


>ref|XP_006412194.1| hypothetical protein EUTSA_v10024529mg [Eutrema salsugineum]
           gi|557113364|gb|ESQ53647.1| hypothetical protein
           EUTSA_v10024529mg [Eutrema salsugineum]
          Length = 725

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   ALACVDAAVSPPSYGIAWDGALPAPG-IFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRI 177
           ALACVD A  PP Y  + D +LP  G +F   +P +      D     WS  LSA LYRI
Sbjct: 3   ALACVDTAFVPPGYAFSGDSSLPTAGDVFMPASPNSAAASVVDSS-CRWSSSLSASLYRI 61

Query: 178 DSWGVPYF 201
           D WG PYF
Sbjct: 62  DGWGAPYF 69


>dbj|BAJ34222.1| unnamed protein product [Thellungiella halophila]
          Length = 725

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 32/68 (47%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
 Frame = +1

Query: 1   ALACVDAAVSPPSYGIAWDGALPAPG-IFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRI 177
           ALACVD A  PP Y  + D +LP  G +F   +P +      D     WS  LSA LYRI
Sbjct: 3   ALACVDTAFVPPGYAFSGDSSLPTAGDVFMPASPNSAAASVVDSS-CRWSSSLSASLYRI 61

Query: 178 DSWGVPYF 201
           D WG PYF
Sbjct: 62  DGWGAPYF 69


>ref|XP_006423501.1| hypothetical protein CICLE_v10027873mg [Citrus clementina]
           gi|557525435|gb|ESR36741.1| hypothetical protein
           CICLE_v10027873mg [Citrus clementina]
          Length = 753

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 36/77 (46%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
 Frame = +1

Query: 10  CVDAAVSPPSYGIAWDGALPAPGIFP-----GGAPTTPVGD--------AADGRPVPWSP 150
           CVDAAV+PP+Y  +  G+LP P   P     G  P TP+          AAD     WSP
Sbjct: 7   CVDAAVAPPAYANSPLGSLPVPPPLPLSFISGAPPPTPMSPTSASAGSVAADVDSSHWSP 66

Query: 151 DLSAVLYRIDSWGVPYF 201
             SA LY+IDSWG PYF
Sbjct: 67  SHSASLYKIDSWGAPYF 83


>gb|AAF42972.1|AF127241_1 arginine decarboxylase 2 [Nicotiana tabacum]
          Length = 721

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/66 (53%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +1

Query: 10  CVDAAV-SPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDS 183
           CVDAAV SPP SY  + D +LPAP  F  G P T    A+ G     SPDLS+ LY +D 
Sbjct: 7   CVDAAVVSPPLSYAFSRDSSLPAPEFFASGVPPTNSAAASIG-----SPDLSSALYGVDG 61

Query: 184 WGVPYF 201
           WG PYF
Sbjct: 62  WGAPYF 67


>gb|AAF42970.1|AF127239_1 arginine decarboxylase 1 [Nicotiana tabacum]
           gi|7230373|gb|AAF42971.1|AF127240_1 arginine
           decarboxylase 1 [Nicotiana tabacum]
          Length = 720

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 32/65 (49%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
 Frame = +1

Query: 10  CVDAAVSPP-SYGIAWDGALPAPGIFPGGAPTTPVGDAADGRPVPWSPDLSAVLYRIDSW 186
           CVDA VSPP  Y  + D +LPAP  F  G P T     + G     SPDLS+ LY +D W
Sbjct: 7   CVDATVSPPLGYAFSRDSSLPAPEFFTSGVPPTNSAAGSIG-----SPDLSSALYGVDGW 61

Query: 187 GVPYF 201
           G PYF
Sbjct: 62  GAPYF 66


Top