BLASTX nr result
ID: Zingiber24_contig00041158
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041158
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY32023.1| Pentatricopeptide repeat superfamily protein [The... 141 1e-31
emb|CBI40106.3| unnamed protein product [Vitis vinifera] 140 2e-31
ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
ref|XP_002309013.2| hypothetical protein POPTR_0006s07570g [Popu... 138 7e-31
ref|XP_006474254.1| PREDICTED: pentatricopeptide repeat-containi... 138 9e-31
ref|XP_006453269.1| hypothetical protein CICLE_v10010390mg [Citr... 138 9e-31
ref|XP_002520121.1| pentatricopeptide repeat-containing protein,... 137 1e-30
ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containi... 137 2e-30
ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containi... 135 4e-30
gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indi... 123 3e-26
ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group] g... 122 5e-26
gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japo... 122 5e-26
gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sat... 122 5e-26
ref|XP_006664140.1| PREDICTED: pentatricopeptide repeat-containi... 121 1e-25
ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [S... 121 1e-25
gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily p... 120 1e-25
ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat... 120 2e-25
tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea m... 120 2e-25
gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea m... 120 2e-25
ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea ma... 120 2e-25
>gb|EOY32023.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 589
Score = 141 bits (355), Expect = 1e-31
Identities = 67/100 (67%), Positives = 81/100 (81%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QM+ G P+SVTF+GLL AC+HAGLVD+GL LFNSM+ETYGI P+IEH SCLID+LGR+
Sbjct: 395 QMRAIGLEPDSVTFVGLLMACNHAGLVDKGLHLFNSMQETYGITPDIEHFSCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL EAEDY+K P+ D V G+LLS+CRLH DV +G R
Sbjct: 455 GRLNEAEDYMKKYPFGQDPVALGSLLSACRLHGDVVMGAR 494
>emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 140 bits (353), Expect = 2e-31
Identities = 68/100 (68%), Positives = 80/100 (80%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QM G P+SVTFIGLLTAC+HAGLVD+G FNSMEETYGI P+IEH SCLIDMLGR+
Sbjct: 395 QMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL EAE+Y++ P+ ND V+ +LLS+ RLH DV IGER
Sbjct: 455 GRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGER 494
>ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 140 bits (353), Expect = 2e-31
Identities = 68/100 (68%), Positives = 80/100 (80%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QM G P+SVTFIGLLTAC+HAGLVD+G FNSMEETYGI P+IEH SCLIDMLGR+
Sbjct: 395 QMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL EAE+Y++ P+ ND V+ +LLS+ RLH DV IGER
Sbjct: 455 GRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGER 494
>ref|XP_002309013.2| hypothetical protein POPTR_0006s07570g [Populus trichocarpa]
gi|550335720|gb|EEE92536.2| hypothetical protein
POPTR_0006s07570g [Populus trichocarpa]
Length = 583
Score = 138 bits (348), Expect = 7e-31
Identities = 66/99 (66%), Positives = 81/99 (81%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
+MK G P+SVTF+GLLTA +HAGLVDEGL FNSMEETYGI PEIEH SCLID+LGR+
Sbjct: 395 KMKTMGVKPDSVTFVGLLTASNHAGLVDEGLVYFNSMEETYGISPEIEHFSCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
GRL EA++Y+K P+ +D V+ G+LLS+CRLH DV G+
Sbjct: 455 GRLNEAKEYMKKFPFGHDTVVLGSLLSACRLHGDVDTGK 493
>ref|XP_006474254.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Citrus sinensis]
Length = 589
Score = 138 bits (347), Expect = 9e-31
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK G P+SVTFIGLLTAC+HAGLV EG FNSME+TYGI P+IEH +CLID+LGR+
Sbjct: 395 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
G+LL+AE+Y K P D ++ G LLS+CRL +DV IGER
Sbjct: 455 GKLLKAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 494
>ref|XP_006453269.1| hypothetical protein CICLE_v10010390mg [Citrus clementina]
gi|557556495|gb|ESR66509.1| hypothetical protein
CICLE_v10010390mg [Citrus clementina]
Length = 611
Score = 138 bits (347), Expect = 9e-31
Identities = 65/100 (65%), Positives = 79/100 (79%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK G P+SVTFIGLLTAC+HAGLV EG FNSME+TYGI P+IEH +CLID+LGR+
Sbjct: 395 QMKATGIKPDSVTFIGLLTACNHAGLVKEGEAYFNSMEKTYGISPDIEHFTCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
G+LL+AE+Y K P D ++ G LLS+CRL +DV IGER
Sbjct: 455 GKLLKAEEYTKKFPLGQDPIVLGTLLSACRLRRDVVIGER 494
>ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540613|gb|EEF42176.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 589
Score = 137 bits (345), Expect = 1e-30
Identities = 64/99 (64%), Positives = 80/99 (80%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
+MK G P+SVTF+GLLTAC+HAGLV+EG FNSMEE YGI P IEH SCLID+LGR+
Sbjct: 395 KMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
GRL EAE+Y++ P+ +D +I G+LLS+CRLH D+ IGE
Sbjct: 455 GRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGE 493
>ref|XP_006361637.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like isoform X1 [Solanum tuberosum]
Length = 590
Score = 137 bits (344), Expect = 2e-30
Identities = 63/100 (63%), Positives = 80/100 (80%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
+MK G P+SVTF+GLL AC+HAGLVDEGL FN+M E YG+ P+IEH SCLID+LGR+
Sbjct: 395 EMKSVGLKPDSVTFLGLLVACNHAGLVDEGLYYFNTMNEIYGVTPDIEHFSCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL +AE+Y++ P+ +D V+ G LLS+CRLH DV IGER
Sbjct: 455 GRLKDAEEYMQRYPFGHDSVVLGCLLSACRLHGDVVIGER 494
>ref|XP_004242825.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like isoform 1 [Solanum lycopersicum]
gi|460394471|ref|XP_004242826.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33170-like isoform 2 [Solanum lycopersicum]
Length = 590
Score = 135 bits (341), Expect = 4e-30
Identities = 62/100 (62%), Positives = 80/100 (80%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
+M +G P+SVTF+GLL AC+HAGLVDEGL FN+M E YG+ P+IEH SCLID+LGR+
Sbjct: 395 EMMSDGLKPDSVTFLGLLIACNHAGLVDEGLYYFNTMNEIYGVTPDIEHFSCLIDLLGRA 454
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL +AE++++ P+ ND V+ G LLS+CRLH DV IGER
Sbjct: 455 GRLKDAEEHMQRYPFGNDSVVLGCLLSACRLHGDVVIGER 494
>gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 123 bits (308), Expect = 3e-26
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H G VDEG F++ME YGI P+IEH C+ID+LGR
Sbjct: 714 QMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRG 773
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 774 GLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 812
>ref|NP_001177025.1| Os12g0577900 [Oryza sativa Japonica Group]
gi|255670427|dbj|BAH95753.1| Os12g0577900, partial
[Oryza sativa Japonica Group]
Length = 614
Score = 122 bits (306), Expect = 5e-26
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H G VDEG F++ME YGI P+IEH C+ID+LGR
Sbjct: 414 QMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRG 473
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 474 GLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 512
>gb|EEE53487.1| hypothetical protein OsJ_36641 [Oryza sativa Japonica Group]
Length = 921
Score = 122 bits (306), Expect = 5e-26
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H G VDEG F++ME YGI P+IEH C+ID+LGR
Sbjct: 721 QMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRG 780
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 781 GLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 819
>gb|ABA99065.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 491
Score = 122 bits (306), Expect = 5e-26
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H G VDEG F++ME YGI P+IEH C+ID+LGR
Sbjct: 291 QMKQQGFNPDAVTMINVLSACTHMGFVDEGRRHFSNMERDYGIMPQIEHYGCMIDLLGRG 350
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 351 GLIKEAVDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 389
>ref|XP_006664140.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Oryza brachyantha]
Length = 491
Score = 121 bits (303), Expect = 1e-25
Identities = 55/99 (55%), Positives = 73/99 (73%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC H G VDEG F++ME YGI P+IEH C+ID+LGR
Sbjct: 291 QMKQQGFNPDAVTMINVLSACRHMGSVDEGRRYFSNMERDYGIMPQIEHYGCMIDLLGRG 350
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 351 GLIKEAIDLIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 389
>ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein
SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 121 bits (303), Expect = 1e-25
Identities = 55/99 (55%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H GLV+EG F +ME YGI PEIEH C++D+LGR
Sbjct: 490 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPEIEHYGCMVDLLGRG 549
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 550 GLIKEAVDMIKSMPWEPNEVIWGSLLSACRLHKNVEYAE 588
>gb|EOY03563.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 672
Score = 120 bits (302), Expect = 1e-25
Identities = 50/100 (50%), Positives = 75/100 (75%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
++K+EGF P+ VTF+G+L AC+HAG +DEG+ F ME+ YGI P+IEH C++D+LGR
Sbjct: 467 RLKKEGFQPDRVTFVGILCACTHAGFIDEGVEYFYVMEKDYGIVPQIEHYGCMVDLLGRG 526
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL EA +++ P++ + +IWG LL++CRLH V + E+
Sbjct: 527 GRLNEAFRLVQIMPFEPNAIIWGTLLAACRLHNAVKLAEK 566
>ref|XP_004236339.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Solanum lycopersicum]
Length = 630
Score = 120 bits (301), Expect = 2e-25
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
+MKREG P S+TF G+L ACSH GLVD G +F SME YGI IEH C++D+LGR
Sbjct: 349 RMKREGVKPTSITFSGVLNACSHGGLVDIGFDIFESMETEYGIERRIEHYGCMVDLLGRV 408
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GRL EA D+I+ D +IWG+LLS+CR+HK+ +GER
Sbjct: 409 GRLEEAYDFIQKGNIAPDNIIWGSLLSACRIHKNFELGER 448
>tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 120 bits (300), Expect = 2e-25
Identities = 54/99 (54%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H GLV+EG F +ME YGI P+IEH C++D+LGR
Sbjct: 487 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 546
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 547 GLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAE 585
>gb|ACG27757.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 633
Score = 120 bits (300), Expect = 2e-25
Identities = 51/100 (51%), Positives = 75/100 (75%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
Q++ +G P +TFIG+L ACSH+GLVDEG LF +MEE YGI P++EH C++D+LGR+
Sbjct: 352 QLRAQGLWPTDITFIGVLNACSHSGLVDEGRALFAAMEEEYGIVPKVEHYGCMVDLLGRA 411
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGER 302
GR+ EA D ++ + D +W +LL +CRLHK++A+G+R
Sbjct: 412 GRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLALGQR 451
>ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 120 bits (300), Expect = 2e-25
Identities = 54/99 (54%), Positives = 74/99 (74%)
Frame = +3
Query: 3 QMKREGFTPESVTFIGLLTACSHAGLVDEGLTLFNSMEETYGICPEIEHLSCLIDMLGRS 182
QMK++GF P++VT I +L+AC+H GLV+EG F +ME YGI P+IEH C++D+LGR
Sbjct: 415 QMKQQGFHPDAVTLINVLSACTHMGLVEEGRRFFANMETDYGIKPQIEHYGCMVDLLGRG 474
Query: 183 GRLLEAEDYIKMSPYQNDYVIWGNLLSSCRLHKDVAIGE 299
G + EA D IK P++ + VIWG+LLS+CRLHK+V E
Sbjct: 475 GLIKEAVDMIKRMPWEPNEVIWGSLLSACRLHKNVEYAE 513