BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00041087
         (468 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   119   5e-25
ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_006361845.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
gb|EPS61687.1| hypothetical protein M569_13103 [Genlisea aurea]       115   8e-24
ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containi...   113   2e-23
gb|EMT00923.1| hypothetical protein F775_21545 [Aegilops tauschii]    112   4e-23
ref|XP_004304994.1| PREDICTED: pentatricopeptide repeat-containi...   112   4e-23
gb|ESW19045.1| hypothetical protein PHAVU_006G092000g [Phaseolus...   112   7e-23
ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Popu...   110   2e-22
gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus pe...   109   3e-22
ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   108   1e-21
ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containi...   106   3e-21
ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citr...   106   3e-21
gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indi...   106   3e-21
gb|EOY11338.1| Tetratricopeptide repeat-like superfamily protein...   105   6e-21
gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japo...   105   6e-21
gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis]     103   2e-20
ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar...   102   7e-20

>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score =  119 bits (297), Expect = 5e-25
 Identities = 68/150 (45%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILK---ILDPFALHARSHPIHVWNALVSMYSKCGQMV 271
           +S L+SLCGRE    LG+S HA+I+K    LD        + I VWN+L+SMYS+CG++ 
Sbjct: 47  ISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYSRCGELR 106

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVY 91
            A+KVFD M +KD++SWNS ISG L   D E G   FK++++SGI   D AT +TVL+  
Sbjct: 107 DATKVFDHMPMKDTISWNSRISGLLGNGDIEMGFRVFKQLYESGIYQFDQATLTTVLTAC 166

Query: 90  VEMELFLGITMIHACTIVSGYLVVVPVGNA 1
            + E      MIH+   + GY   + VGNA
Sbjct: 167 DKPEFCYVSKMIHSLVFLYGYEREITVGNA 196



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/121 (28%), Positives = 58/121 (47%)
 Frame = -1

Query: 462 YSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKC 283
           Y    A L+++++ C +     +    H+ +        L+     I V NAL++ Y +C
Sbjct: 152 YQFDQATLTTVLTACDKPEFCYVSKMIHSLVF-------LYGYEREITVGNALITSYFRC 204

Query: 282 GQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTV 103
           G   +  +VFDEM  K+ V+W +VISG   G  +E  +  F +M    +  P+  TY + 
Sbjct: 205 GCCSSGRRVFDEMSEKNVVTWTAVISGLSQGQFYEESLKLFGKMRDGPVD-PNSLTYLSS 263

Query: 102 L 100
           L
Sbjct: 264 L 264


>ref|XP_006577247.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Glycine max]
          Length = 656

 Score =  115 bits (289), Expect = 5e-24
 Identities = 68/155 (43%), Positives = 95/155 (61%), Gaps = 5/155 (3%)
 Frame = -1

Query: 450 NACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHP---IHVWNALVSMYSKCG 280
           +A LSSL+S+CGR+ N  LG+S HA I+K   P +    S P   + VWN+L+SMYSKCG
Sbjct: 44  HADLSSLLSVCGRDGNLNLGSSIHARIIK--QPPSFDFDSSPRDALFVWNSLLSMYSKCG 101

Query: 279 QMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSG--ISLPDHATYST 106
           ++  A K+FD M +KD+VSWN++ISG L   D + G  +F++M +S     L D AT +T
Sbjct: 102 KLQDAIKLFDHMPVKDTVSWNAIISGFLRNRDCDTGFRFFRQMSESRTVCCLFDKATLTT 161

Query: 105 VLSVYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           +LS    +E      MIH    V G+   + VGNA
Sbjct: 162 MLSACDGLEFSSVTKMIHCLVFVGGFEREITVGNA 196



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 36/106 (33%), Positives = 56/106 (52%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++ + G   +  LG   H+ I+K             + V N L++MYSKCG +  + 
Sbjct: 361 VSAILGVFGVGTSLTLGKQIHSLIIK-------KNFIQNLFVSNGLINMYSKCGDLYDSL 413

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPD 124
           +VF EM  K+SVSWNSVI+      D  R + ++  M   GI+L D
Sbjct: 414 QVFHEMTQKNSVSWNSVIAAYARYGDGFRALQFYDDMRVEGIALTD 459



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 32/91 (35%), Positives = 48/91 (52%)
 Frame = -1

Query: 324 IHVWNALVSMYSKCGQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQ 145
           I V NAL++ Y KCG      +VFDEM  ++ V+W +VISG      +E G+  F +M +
Sbjct: 191 ITVGNALITSYFKCGCFSQGRQVFDEMLERNVVTWTAVISGLAQNEFYEDGLRLFDQMRR 250

Query: 144 SGISLPDHATYSTVLSVYVEMELFLGITMIH 52
             +S P+  TY + L     ++  L    IH
Sbjct: 251 GSVS-PNSLTYLSALMACSGLQALLEGRKIH 280


>ref|XP_006361845.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Solanum tuberosum]
          Length = 667

 Score =  115 bits (287), Expect = 8e-24
 Identities = 63/150 (42%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHP---IHVWNALVSMYSKCGQMV 271
           +S L+S  GRE N RLG+S HA+ILK  +   L  +S     + +WN+L++MY++CG+  
Sbjct: 44  ISLLLSTSGREGNVRLGSSIHASILKDPEFVLLGNQSSAQDVLVIWNSLLTMYARCGRTQ 103

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVY 91
            AS+VFDEM +KD+VSWNS++SG L   +++ G GYFK M  SG    DHA+ +T+LS  
Sbjct: 104 DASQVFDEMPVKDTVSWNSIVSGFLSNWNFKMGFGYFKEMMGSGSFKFDHASVTTILSAC 163

Query: 90  VEMELFLGITMIHACTIVSGYLVVVPVGNA 1
             ++  +   M+H   ++SG    + V NA
Sbjct: 164 DGLDFIMVNKMMHGLVLLSGLEREIAVSNA 193



 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/143 (27%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILK---ILDPFALHARSHPIHVWNALVSMYSKCGQMV 271
           +S+++ + G + +  LG   H+ I+K   I + F          V N L++MYSKCG++ 
Sbjct: 358 VSAILGVFGSDTSLALGKQVHSLIIKKGFISNSF----------VRNGLINMYSKCGELE 407

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLS-- 97
            + K+F+ +  ++SVSWNS+I+      +  R +  ++ M   G+  P   T+ ++L   
Sbjct: 408 ESVKIFNSIAQRNSVSWNSIIAAYARHGNGYRALQLYEEMRSYGVD-PTDVTFISLLHAC 466

Query: 96  -----VYVEMELFLGITMIHACT 43
                V   ME F  + +I+  T
Sbjct: 467 SHVGLVNKGMEFFESMQIIYGMT 489


>gb|EPS61687.1| hypothetical protein M569_13103 [Genlisea aurea]
          Length = 641

 Score =  115 bits (287), Expect = 8e-24
 Identities = 63/147 (42%), Positives = 92/147 (62%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           L  ++S C +ERN RLG S HA+I+K   P  +   S  + ++N L+  Y KCG++  AS
Sbjct: 45  LIGVLSSCAKERNIRLGYSLHASIIKNPPPDPIF--STDVVIYNCLLHFYCKCGELNDAS 102

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVYVEM 82
           +VFDEM ++D+VSWNS+ISG L+  ++ +GI  FK +  S     D+AT +T+LS + E 
Sbjct: 103 RVFDEMPVRDTVSWNSLISGLLVHGEFRKGISVFKLLVASLSCQFDNATLTTMLSAFAEA 162

Query: 81  ELFLGITMIHACTIVSGYLVVVPVGNA 1
           E    + MIHA  I SG+   + VGNA
Sbjct: 163 ESLHMLKMIHALVIFSGFDKEISVGNA 189


>ref|XP_004230191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Solanum lycopersicum]
          Length = 667

 Score =  115 bits (287), Expect = 8e-24
 Identities = 61/150 (40%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFAL---HARSHPIHVWNALVSMYSKCGQMV 271
           +S L+S  GRE N RLG+S HA+ILK  +   L   ++      VWN+L++MY++CG+  
Sbjct: 44  ISLLLSTSGREGNVRLGSSIHASILKDPELVLLGNQYSTQDAFVVWNSLLTMYARCGRTQ 103

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVY 91
            AS+VFDEM +KD+V+WNS++SG L   +++ G GYFK+M  S   + DHA+ +T+LS  
Sbjct: 104 DASQVFDEMPVKDTVTWNSIVSGFLSNGNFKMGFGYFKQMMGSDSLMFDHASVTTILSAC 163

Query: 90  VEMELFLGITMIHACTIVSGYLVVVPVGNA 1
             ++  +   M+H   ++SG    + V NA
Sbjct: 164 DGLDFIMVNKMMHGLVLLSGLEREIAVSNA 193



 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILK---ILDPFALHARSHPIHVWNALVSMYSKCGQMV 271
           +S+++ + G +    LG   H+ I+K   I + F          V N L++MYSKCG++ 
Sbjct: 358 VSAILGVFGSDTCLALGKQVHSLIIKKGFISNSF----------VRNGLINMYSKCGELE 407

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLS-- 97
            + K+F+ +  ++SVSWNS+I+      +  R +  ++ M   G+  P   T+ ++L   
Sbjct: 408 ESVKIFNSIAQRNSVSWNSIIAAYARHGNGYRTLQLYEEMRSYGVD-PTDVTFISLLHAC 466

Query: 96  -----VYVEMELFLGITMIHACT 43
                V   ME F  + +I+  T
Sbjct: 467 SHVGLVNKGMEFFESMQVIYGMT 489


>ref|XP_004494620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Cicer arietinum]
          Length = 661

 Score =  113 bits (283), Expect = 2e-23
 Identities = 67/163 (41%), Positives = 103/163 (63%), Gaps = 9/163 (5%)
 Frame = -1

Query: 462 YSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHA-RSHPIHVWNALVSMYSK 286
           ++HA+  L+SL+SLCGR++N+ LG+S HA I+K       H+ + + + +WN+L+SMYSK
Sbjct: 44  FNHAH--LTSLLSLCGRDKNFTLGSSIHAHIIKQPPSLDFHSSQRNALFIWNSLLSMYSK 101

Query: 285 CGQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQS-----GISLPDH 121
           CG++  A K+FD M ++D+VSWN++ISG L   D++    +FK+M +S     G    D 
Sbjct: 102 CGELRDAVKLFDHMPVRDTVSWNTMISGFLRNEDFDTAFKFFKQMSESRRVCCGF---DK 158

Query: 120 ATYSTVLSVYVEMEL-FLGIT--MIHACTIVSGYLVVVPVGNA 1
           AT +T+LS    + L F  +T  MIH    V G+   + VGNA
Sbjct: 159 ATLTTMLSACDGLRLGFSSVTTQMIHGLVFVGGFDREITVGNA 201



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 36/114 (31%), Positives = 64/114 (56%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++ + G   +  LG   H+ I K       +   +P  V N L++MYSKCG++  + 
Sbjct: 366 VSAILGVFGLGTSLALGKQIHSLITK------KNFSQNPF-VGNGLINMYSKCGELADSL 418

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           +VF +M  K+SVSWNSVI+      D  + + +++ M   GI+ P + T+ ++L
Sbjct: 419 QVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRLEGIA-PTNVTFLSLL 471


>gb|EMT00923.1| hypothetical protein F775_21545 [Aegilops tauschii]
          Length = 613

 Score =  112 bits (281), Expect = 4e-23
 Identities = 65/161 (40%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
 Frame = -1

Query: 468 LNYSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFAL----HARSHPIHVWNALV 301
           LNY++    LS L++ CGR  ++RLG + HA ++K    F L     +  H +  WNALV
Sbjct: 7   LNYAY----LSGLLARCGRAADHRLGAALHATVVKNPAHFLLCPLHPSLRHVLVAWNALV 62

Query: 300 SMYSKCGQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDW-ERGIGYFKRMHQSGISLPD 124
           SMY++CG+   A++VFDEMR++DS+SWNS+IS     +   +  +  F+RM +SG+S  D
Sbjct: 63  SMYARCGRHDDATRVFDEMRVRDSISWNSLISSAAASSSGADDALLQFRRMLRSGLSC-D 121

Query: 123 HATYSTVLSVYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           HAT++TVLSV           M+H   +  G+   V +GNA
Sbjct: 122 HATFTTVLSVSARAVSLPACAMVHGLVVSRGFEGEVSIGNA 162



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 35/114 (30%), Positives = 57/114 (50%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++   G      LG   HA ++K             I+V N L++MYSKCG++  + 
Sbjct: 326 VSAVLGAFGASAPIALGKQIHALVIK-------KCFGRNIYVCNGLINMYSKCGELQESV 378

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           +VFDE   K+S+SWNS+I+              F+ M  SG + P   T+ ++L
Sbjct: 379 QVFDETPSKNSISWNSIIAAFARHGQGSEVFQLFESMKASGAN-PTDVTFLSLL 431


>ref|XP_004304994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Fragaria vesca subsp. vesca]
          Length = 651

 Score =  112 bits (281), Expect = 4e-23
 Identities = 61/144 (42%), Positives = 93/144 (64%)
 Frame = -1

Query: 432 LVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAASKVF 253
           L+S CG+ R+++LG+S HA+I+K  + F    R+  + +WN+L+SMY KCGQ+  A KVF
Sbjct: 49  LLSFCGKNRHFQLGSSLHASIIKNPELFEPENRNVVV-LWNSLLSMYLKCGQLWDAVKVF 107

Query: 252 DEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVYVEMELF 73
           DEM ++D+VSWN+VISG L   + E G GYFKRM +S     D AT + +++ +  +E  
Sbjct: 108 DEMPVRDTVSWNTVISGFLRNGEPETGFGYFKRMLESDYCRFDKATLTCLIAGFDGVEGC 167

Query: 72  LGITMIHACTIVSGYLVVVPVGNA 1
               M+H   +++G+     VGNA
Sbjct: 168 YLNKMMHGLAVLNGFERETAVGNA 191



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 32/106 (30%), Positives = 59/106 (55%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++ + G + +  LG   H+ I+K    F  ++      V N L++MYSKCG++  + 
Sbjct: 356 VSAVLGVFGVDTSLGLGKQLHSLIVK--KNFGYNS-----FVTNGLINMYSKCGELEDSE 408

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPD 124
           KVF +M  ++S+SWNS+I+      D  + +  ++ M   G+ L D
Sbjct: 409 KVFTQMPQRNSISWNSMIAAFARHGDGSKALQLYENMQMEGVQLTD 454


>gb|ESW19045.1| hypothetical protein PHAVU_006G092000g [Phaseolus vulgaris]
          Length = 599

 Score =  112 bits (279), Expect = 7e-23
 Identities = 67/154 (43%), Positives = 94/154 (61%), Gaps = 4/154 (2%)
 Frame = -1

Query: 450 NACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARS--HPIHVWNALVSMYSKCGQ 277
           +A LSSL+S+CGR+ N  LG+S HA ++K   PF  +  S  + + VWN+L+ MYSKCGQ
Sbjct: 43  HADLSSLLSVCGRDGNLNLGSSIHARVIK-QPPFYDYDGSPRNALFVWNSLLCMYSKCGQ 101

Query: 276 MVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLP--DHATYSTV 103
           +  A K+FD M +KD VSWN++ISG L   D + G  +FK+M++S       D AT +T+
Sbjct: 102 LQDAVKLFDRMPVKDIVSWNTMISGFLRNRDLDTGFRFFKQMNESRTVCCGFDKATLTTM 161

Query: 102 LSVYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           LS    +E      M+H    V G+   V VGNA
Sbjct: 162 LSACDGLEFSSVTKMVHGLVFVGGFDRDVTVGNA 195


>ref|XP_002319538.2| hypothetical protein POPTR_0013s02200g [Populus trichocarpa]
           gi|550324744|gb|EEE95461.2| hypothetical protein
           POPTR_0013s02200g [Populus trichocarpa]
          Length = 670

 Score =  110 bits (275), Expect = 2e-22
 Identities = 58/147 (39%), Positives = 89/147 (60%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +  L+S+CGRE    LG+S HA+I+K  + F      +   +WN+L+SMY+K G +  A+
Sbjct: 47  IGHLLSICGREGYLHLGSSLHASIIKTHE-FFNPLEQNAFVIWNSLLSMYAKNGVLTDAA 105

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVYVEM 82
           K+FDEM ++D+VSWN +ISG L    ++ G G+FK+M   G    D AT +T+LS     
Sbjct: 106 KLFDEMPMRDTVSWNIMISGFLKDGSFDVGFGFFKQMQSLGFYRLDQATLTTILSACDRP 165

Query: 81  ELFLGITMIHACTIVSGYLVVVPVGNA 1
           EL     M+H   +++G+   + VGNA
Sbjct: 166 ELGFVNKMVHCLAVLNGFQREISVGNA 192



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++ + G + +  LG   H+ ++K          S+P  V N L++MYSKCG +  ++
Sbjct: 357 VSAVLGVFGADTSLGLGQQIHSLVIK------RSFGSNPF-VGNGLINMYSKCGDLEDST 409

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLS----- 97
           KVF  M   +SVSWNS+I+      D  R +  +K M   G+  P   T+ ++L      
Sbjct: 410 KVFSRMPCMNSVSWNSMIAAFARHGDGSRALQLYKEMRLKGVE-PTDVTFLSLLHACSHV 468

Query: 96  --VYVEMELFLGITMIHACT 43
             V   ME    +T +H  T
Sbjct: 469 GLVEKGMEFLKSMTEVHKLT 488


>gb|EMJ08360.1| hypothetical protein PRUPE_ppa023606mg [Prunus persica]
          Length = 646

 Score =  109 bits (273), Expect = 3e-22
 Identities = 59/150 (39%), Positives = 92/150 (61%), Gaps = 3/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARS---HPIHVWNALVSMYSKCGQMV 271
           +S L+SLCG+E N+ LG+S HA+I+K  + F   ++    + + VWN+L+S+Y KCGQ  
Sbjct: 51  ISLLLSLCGKEGNFHLGSSLHASIIKNPEFFYPESQDDYRYVLVVWNSLLSVYLKCGQFS 110

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVY 91
            A K+FD M +KD+VSWN++ISG     + + G GYFK+M  S     D AT +++L+ +
Sbjct: 111 NAVKLFDNMGMKDTVSWNTMISGFFRNGESDVGFGYFKQMRGSDFYRFDRATLTSILAAF 170

Query: 90  VEMELFLGITMIHACTIVSGYLVVVPVGNA 1
              E      M+H   +++G+     VGNA
Sbjct: 171 DGPEFCHLNKMMHGLVVLNGFERETAVGNA 200



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 33/114 (28%), Positives = 61/114 (53%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++ + G + +  LG   H+ I+K        +  H   V N L++MYSKCG++  + 
Sbjct: 365 VSAVLGVFGVDTSLGLGKQLHSLIVK-------KSFGHNSFVCNGLINMYSKCGELGDSV 417

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           KVF  M  ++S+SWNS+I+      D  + +  ++ M   G+  P   T+ ++L
Sbjct: 418 KVFSRMPQRNSISWNSMIAAFARHGDGSKALQLYEEMKMDGVQ-PTDVTFLSLL 470


>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  108 bits (269), Expect = 1e-21
 Identities = 63/156 (40%), Positives = 95/156 (60%), Gaps = 6/156 (3%)
 Frame = -1

Query: 450 NACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALH-ARSHPIHVWNALVSMYSKCGQM 274
           +A L+SL++LCGR+RN  LG+S HA I+K    F    ++ + + +WN+L+SMYSKCG+ 
Sbjct: 34  HADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEF 93

Query: 273 VAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSG--ISLPDHATYSTVL 100
             A  VFD M ++D+VSWN++ISG L   D++    +FK+M +S       D AT +T+L
Sbjct: 94  RNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTML 153

Query: 99  SVYVEMELFLGIT---MIHACTIVSGYLVVVPVGNA 1
           S    + L +  +   MIH    V G+   + VGNA
Sbjct: 154 SGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNA 189



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILK---ILDPFALHARSHPIHVWNALVSMYSKCGQMV 271
           +S+++ + G      LG   H+ I+K     +PF          V N LV+MYSKCG + 
Sbjct: 355 VSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPF----------VGNGLVNMYSKCGDLS 404

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
            +  VF +M  K+SVSWNSVI+      D  + + +++ M   G++ P   T+ ++L
Sbjct: 405 DSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVA-PTDVTFLSLL 460


>ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Brachypodium distachyon]
          Length = 614

 Score =  107 bits (268), Expect = 1e-21
 Identities = 65/159 (40%), Positives = 90/159 (56%), Gaps = 10/159 (6%)
 Frame = -1

Query: 447 ACLSSLVSLCGRERNYRLGTSFHAAILKILDPFAL----HARSHPIHVWNALVSMYSKCG 280
           A LS L+S CGR  ++RLG + H  I+K    F L     +  H +  WNALVSMY++CG
Sbjct: 10  AYLSGLLSRCGRAADHRLGAALHVTIVKNPSHFLLCPLRPSLRHVLVAWNALVSMYARCG 69

Query: 279 QMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQS------GISLPDHA 118
           +   A++VFDEMR++DSVSWNS+I      +  E  +  F+RM +S      G+S  DHA
Sbjct: 70  RHAEAARVFDEMRIRDSVSWNSLIG----SSGAEDALSQFRRMLRSSSSPGGGVSC-DHA 124

Query: 117 TYSTVLSVYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           T++TVLS            M+H   +  G+   V VGNA
Sbjct: 125 TFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNA 163



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 33/114 (28%), Positives = 57/114 (50%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++   G    + LG   HA ++K             I+V N L++MYSKCG++  + 
Sbjct: 327 VSAVLGAFGASAPFALGKQIHALVIK-------KCFGRNIYVCNGLINMYSKCGELEESI 379

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           +VF+E   K+S+SWNS+I+              F+ M   G + P   T+ ++L
Sbjct: 380 QVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKADGAN-PTDVTFLSLL 432


>ref|XP_006472016.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Citrus sinensis]
          Length = 899

 Score =  106 bits (265), Expect = 3e-21
 Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFA---LHARSHPIHVWNALVSMYSKCGQMV 271
           +S L+S+  +E ++ LG S HA+ +K  + F    ++   +   +WN+L+S Y KC QM 
Sbjct: 47  ISRLLSISAKEGHFHLGPSLHASFIKTFESFDNQNVYNVPNATVIWNSLLSFYLKCDQMR 106

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVY 91
            A K+FD+M ++D+VSWN+++SG L   +++ G G+FKR  + G    D A+++ +LS  
Sbjct: 107 NAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSAC 166

Query: 90  VEMELFLGITMIHACTIVSGYLVVVPVGNA 1
              EL L   MIH    + GY   V VGNA
Sbjct: 167 DRPELSLVSKMIHCLVYLCGYEEEVTVGNA 196



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/117 (29%), Positives = 56/117 (47%)
 Frame = -1

Query: 462 YSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKC 283
           Y    A  + ++S C R     +    H  +        L      + V NAL++ Y KC
Sbjct: 152 YQLDQASFTIILSACDRPELSLVSKMIHCLVY-------LCGYEEEVTVGNALITSYFKC 204

Query: 282 GQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATY 112
           G   +  KVF EMR+++ ++W +VISG +    +E G+  F +M + G+  P+  TY
Sbjct: 205 GSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKM-RLGLINPNSLTY 260


>ref|XP_006433326.1| hypothetical protein CICLE_v10000527mg [Citrus clementina]
           gi|557535448|gb|ESR46566.1| hypothetical protein
           CICLE_v10000527mg [Citrus clementina]
          Length = 659

 Score =  106 bits (265), Expect = 3e-21
 Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFA---LHARSHPIHVWNALVSMYSKCGQMV 271
           +S L+S+  +E ++ LG S HA+ +K  + F    ++   +   +WN+L+S Y KC QM 
Sbjct: 47  ISRLLSISAKEGHFHLGPSLHASFIKTFESFDNQNVYNVPNATVIWNSLLSFYLKCDQMR 106

Query: 270 AASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSVY 91
            A K+FD+M ++D+VSWN+++SG L   +++ G G+FKR  + G    D A+++ +LS  
Sbjct: 107 NAVKLFDDMPMRDTVSWNTMVSGFLRNGEFDMGFGFFKRSLELGFYQLDQASFTIILSAC 166

Query: 90  VEMELFLGITMIHACTIVSGYLVVVPVGNA 1
              EL L   MIH    + GY   V VGNA
Sbjct: 167 DRPELSLVSKMIHCLVYLCGYEEEVTVGNA 196



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/117 (29%), Positives = 56/117 (47%)
 Frame = -1

Query: 462 YSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKC 283
           Y    A  + ++S C R     +    H  +        L      + V NAL++ Y KC
Sbjct: 152 YQLDQASFTIILSACDRPELSLVSKMIHCLVY-------LCGYEEEVTVGNALITSYFKC 204

Query: 282 GQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATY 112
           G   +  KVF EMR+++ ++W +VISG +    +E G+  F +M + G+  P+  TY
Sbjct: 205 GSSSSGRKVFGEMRVRNVITWTAVISGLVQNQLYEEGLKLFVKM-RLGLINPNSLTY 260


>gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
          Length = 591

 Score =  106 bits (265), Expect = 3e-21
 Identities = 65/162 (40%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
 Frame = -1

Query: 468 LNYSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARS----HPIHVWNALV 301
           LNY+      S L++ CGRE + RLG + HAA++K    F L A      H +  WNALV
Sbjct: 9   LNYAR----FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNALV 64

Query: 300 SMYSKCGQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDH 121
           SMY++CG+   A++VFDEMR++D+VSWNS+I+      D    +  F+RM +S     D 
Sbjct: 65  SMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDR 121

Query: 120 ATYSTVLS--VYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           AT++TVLS              M+H   +  G+   VPVGNA
Sbjct: 122 ATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNA 163



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++   G    + LG   HA ++K    F ++      +V N LV+MYSKCG++  + 
Sbjct: 327 VSTVLGAFGASAPFALGKQIHALVIKRC--FGVNT-----YVCNGLVNMYSKCGELRESV 379

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           +VFDEM  K+SVSWNS+I+              F+ M   G + P   T+ ++L
Sbjct: 380 QVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADG-AKPTDVTFLSLL 432


>gb|EOY11338.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
          Length = 762

 Score =  105 bits (262), Expect = 6e-21
 Identities = 59/151 (39%), Positives = 91/151 (60%), Gaps = 4/151 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILK---ILDPFALHARS-HPIHVWNALVSMYSKCGQM 274
           +S L+S+ G++    LG+S HA+++K   I  P      S + + VWN+L+ M SKCG +
Sbjct: 48  ISLLLSISGKQGFVLLGSSIHASLIKNPEICKPAGGFRNSDNALLVWNSLLGMCSKCGTL 107

Query: 273 VAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSV 94
              +K+FDEM +KD+VSWN++ISG L   +++ G  YFK+M +SG    D AT +T+LS 
Sbjct: 108 TDLTKLFDEMPMKDTVSWNTMISGFLRNGEFDNGFRYFKQMRKSGFCSFDQATLTTILSA 167

Query: 93  YVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
              +E      M+H    ++GY   + VGNA
Sbjct: 168 CDGVEFCCVNKMMHGLLFLNGYEREISVGNA 198



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           LS++  + G + +  LG   H+ I+K    F  ++     +V N L++MYSKCG +  + 
Sbjct: 363 LSAVFGIFGEDTSLGLGKQIHSLIIK--RNFGCNS-----YVSNGLINMYSKCGDLEESV 415

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLS----- 97
           KVF  M  ++S+SWNS+I+      D  R +  ++ M   GI  P   T+ ++L      
Sbjct: 416 KVFSRMSQRNSISWNSIIAAFARHGDGYRALQLYEEMRSEGIE-PTDVTFLSLLHACSHV 474

Query: 96  --VYVEMELFLGITMIH 52
             V   MEL   +T +H
Sbjct: 475 GLVEKGMELLKSMTEVH 491


>gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
          Length = 591

 Score =  105 bits (262), Expect = 6e-21
 Identities = 64/162 (39%), Positives = 91/162 (56%), Gaps = 6/162 (3%)
 Frame = -1

Query: 468 LNYSHANACLSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARS----HPIHVWNALV 301
           LNY+      S L++ CGRE + RLG + HAA++K    F L A      H +  WN+LV
Sbjct: 9   LNYAR----FSGLLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLV 64

Query: 300 SMYSKCGQMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDH 121
           SMY++CG+   A++VFDEMR++D+VSWNS+I+      D    +  F+RM +S     D 
Sbjct: 65  SMYARCGRREDAARVFDEMRVRDAVSWNSLIAASRGAGD---ALALFRRMLRSDARACDR 121

Query: 120 ATYSTVLS--VYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           AT++TVLS              M+H   +  G+   VPVGNA
Sbjct: 122 ATFTTVLSECARAGAASLPACAMVHGLVVSCGFEAEVPVGNA 163



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 37/114 (32%), Positives = 60/114 (52%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++   G    + LG   HA ++K    F ++      +V N LV+MYSKCG++  + 
Sbjct: 327 VSAVLGAFGASAPFALGKQIHALVIKRC--FGVNT-----YVCNGLVNMYSKCGELRESV 379

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           +VFDEM  K+SVSWNS+I+              F+ M   G + P   T+ ++L
Sbjct: 380 RVFDEMPSKNSVSWNSIIAAFARHGHGSEVYQLFESMKADG-AKPTDVTFLSLL 432


>gb|EXC40551.1| hypothetical protein L484_000424 [Morus notabilis]
          Length = 656

 Score =  103 bits (257), Expect = 2e-20
 Identities = 61/153 (39%), Positives = 84/153 (54%), Gaps = 3/153 (1%)
 Frame = -1

Query: 450 NACLSSLVSLCGRERNYRLGTSFHAAILK---ILDPFALHARSHPIHVWNALVSMYSKCG 280
           +  +S L+  CGR+  +RLG+S  A+++K    LD        + + VWN+L+ MYS+CG
Sbjct: 44  HVAISRLLPHCGRQGYFRLGSSIQASLIKQYEFLDSENKDIIRNSLVVWNSLLFMYSQCG 103

Query: 279 QMVAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
               A K+FD+M LKD+VSWN+VISG L    +E G G FKRM + G    D AT +T+L
Sbjct: 104 DFSNAVKLFDDMPLKDTVSWNTVISGFLRNGQFENGFGCFKRMRELGFHRFDKATLTTIL 163

Query: 99  SVYVEMELFLGITMIHACTIVSGYLVVVPVGNA 1
           S     E      MIH      GY     V N+
Sbjct: 164 SALDGPEFGYLNEMIHGLVFRCGYEQETAVENS 196



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 35/114 (30%), Positives = 61/114 (53%)
 Frame = -1

Query: 441 LSSLVSLCGRERNYRLGTSFHAAILKILDPFALHARSHPIHVWNALVSMYSKCGQMVAAS 262
           +S+++ + G + +  LG   HA I+K          S+  +V N L++MYSKCGQ+  + 
Sbjct: 361 VSAVLGVFGNDTSLGLGKQIHALIVK-------RNFSYNPYVNNGLINMYSKCGQLEESV 413

Query: 261 KVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVL 100
           +VF EM  K+ +SWNS+I+      D    +  ++ M   G+  P   T+ ++L
Sbjct: 414 RVFSEMPHKNPISWNSMIATFARHGDGFGALRLYEEMKMEGVK-PTDVTFLSLL 466


>ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score =  102 bits (253), Expect = 7e-20
 Identities = 64/150 (42%), Positives = 87/150 (58%), Gaps = 4/150 (2%)
 Frame = -1

Query: 441 LSSLVSLCGRERNY-RLGTSFHAAILK---ILDPFALHARSHPIHVWNALVSMYSKCGQM 274
           +S L+S+CGRE  +  LG   HA+I+K     +P       + + VWN+L+S+Y+KCG++
Sbjct: 47  MSLLLSICGREGWFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKL 106

Query: 273 VAASKVFDEMRLKDSVSWNSVISGCLIGNDWERGIGYFKRMHQSGISLPDHATYSTVLSV 94
           V A K+FDEM ++D +S N V  G L   + E G    KRM  SG    DHAT + VLSV
Sbjct: 107 VDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF--DHATLTIVLSV 164

Query: 93  YVEMELFLGITMIHACTIVSGYLVVVPVGN 4
               E  L   MIHA  I+SGY   + VGN
Sbjct: 165 CDTPEFCLVTKMIHALAILSGYDKEISVGN 194