BLASTX nr result
ID: Zingiber24_contig00041069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00041069
(293 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004485775.1| PREDICTED: pentatricopeptide repeat-containi... 96 7e-18
gb|EXB93300.1| hypothetical protein L484_015288 [Morus notabilis] 94 2e-17
ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004299839.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_003593569.1| Pentatricopeptide repeat-containing protein ... 86 4e-15
gb|ACJ85839.1| unknown [Medicago truncatula] gi|388521431|gb|AFK... 86 4e-15
ref|XP_003545944.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
emb|CBI24302.3| unnamed protein product [Vitis vinifera] 82 7e-14
ref|XP_006594594.1| PREDICTED: pentatricopeptide repeat-containi... 82 1e-13
emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera] 82 1e-13
gb|ESW20704.1| hypothetical protein PHAVU_005G008100g [Phaseolus... 77 2e-12
ref|XP_006420997.1| hypothetical protein CICLE_v10004743mg [Citr... 76 4e-12
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas] 75 1e-11
ref|XP_002322762.2| hypothetical protein POPTR_0016s06560g [Popu... 74 2e-11
tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea m... 74 2e-11
ref|XP_002336601.1| predicted protein [Populus trichocarpa] 74 2e-11
ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group] g... 74 3e-11
gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japo... 74 3e-11
emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group] 74 3e-11
>ref|XP_004485775.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cicer arietinum]
Length = 522
Score = 95.5 bits (236), Expect = 7e-18
Identities = 47/96 (48%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T+ L+ CS LH + GL++HARL+KSG + LF++NSL+ FY S+ D+ S RVF
Sbjct: 61 NHYTFTYALKACSSLHALSKGLEIHARLVKSGHITDLFIKNSLLHFYLSSNDVLSATRVF 120
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I PDVVSWTS +S ++ G + A+ AF SM+V
Sbjct: 121 QSIPSPDVVSWTSLISGFSKCGYESKAIEAFSSMNV 156
>gb|EXB93300.1| hypothetical protein L484_015288 [Morus notabilis]
Length = 461
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/96 (46%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T+ L+ C+ LH GL++HA +LK G+H +F+QNSL+ FY++ DI S RVF
Sbjct: 10 NHYTFTYALKACNSLHAHPKGLEIHAHVLKCGYHHDIFIQNSLLHFYTTKNDIISASRVF 69
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I P+VVSW+ +S L+R G + +A+V F SMDV
Sbjct: 70 DSIRSPNVVSWSLIISGLSRRGFEEEAIVKFSSMDV 105
>ref|XP_004154679.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like, partial [Cucumis sativus]
Length = 472
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T+ L+ C FLH GL++HA L+KSG S +F+QNSL+ FY D+ S +F
Sbjct: 17 NHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIF 76
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I PDVVSWTS +S L++ G + +AL F SM+V
Sbjct: 77 DSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNV 112
>ref|XP_004139030.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like isoform 1 [Cucumis sativus]
gi|449442523|ref|XP_004139031.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g08070-like isoform 2 [Cucumis sativus]
Length = 517
Score = 90.9 bits (224), Expect = 2e-16
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T+ L+ C FLH GL++HA L+KSG S +F+QNSL+ FY D+ S +F
Sbjct: 62 NHFTFTYALKACCFLHQTQKGLEIHAHLIKSGHLSDIFIQNSLLHFYILDGDVSSASLIF 121
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I PDVVSWTS +S L++ G + +AL F SM+V
Sbjct: 122 DSIPDPDVVSWTSIISGLSKLGFEKEALSKFLSMNV 157
>ref|XP_004299839.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 502
Score = 87.4 bits (215), Expect = 2e-15
Identities = 46/96 (47%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T+ L+ C LH H G ++ A + KSG S F+QNSL+ FY +DI S VF
Sbjct: 51 NHYTFTYALKACCLLHSPHKGQEIQAHVTKSGHISDTFIQNSLLHFYVIQSDIVSAAHVF 110
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I PDVVSWTS +S LA+ G +A+V F SMDV
Sbjct: 111 DSIPLPDVVSWTSMISGLAKCGFVDEAIVKFVSMDV 146
>ref|XP_003593569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482617|gb|AES63820.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 528
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T L+ C H GL++HARL+KSG F++N+L+ FY S+ D+ S RVF
Sbjct: 57 NHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVF 116
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I PDVVSWTS +S L++ G + +A+ AF S++V
Sbjct: 117 KSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINV 152
>gb|ACJ85839.1| unknown [Medicago truncatula] gi|388521431|gb|AFK48777.1| unknown
[Medicago truncatula]
Length = 515
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/96 (44%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T L+ C H GL++HARL+KSG F++N+L+ FY S+ D+ S RVF
Sbjct: 57 NHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSNDVVSATRVF 116
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
I PDVVSWTS +S L++ G + +A+ AF S++V
Sbjct: 117 KSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINV 152
>ref|XP_003545944.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 521
Score = 82.4 bits (202), Expect = 6e-14
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T LR C H L++HA L+KSG + LFLQNSL+ FY + D+ S +F
Sbjct: 55 NHYTFTHALRACYSHHSRSKALEIHAHLVKSGHYLDLFLQNSLLHFYLAHNDVVSASNLF 114
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMD 287
I PDVVSWTS VS LA++G + AL F +M+
Sbjct: 115 RSIPSPDVVSWTSLVSGLAKSGFEAQALHHFTNMN 149
>emb|CBI24302.3| unnamed protein product [Vitis vinifera]
Length = 541
Score = 82.0 bits (201), Expect = 7e-14
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVHG-LQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T L S LH +H L++HAR +KSG +S +F+QN+L+ Y + + VF
Sbjct: 75 NHFTFTHALIASSSLHALHKTLEIHARAIKSGHYSDIFIQNTLLHSYVVENNFVFAKSVF 134
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
IS PDVVSWTS +S L++ G D +A+ F SMDV
Sbjct: 135 KSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSMDV 170
>ref|XP_006594594.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 521
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T L+ CSF + L++HA L+KSG + LFLQNSL+ FY + D+ S +F
Sbjct: 55 NHYTFTHALKACSFHNARSKALEIHAHLVKSGRYLDLFLQNSLLHFYLAHNDVVSASNLF 114
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSM 284
I PDVVSWTS +S LA++G + AL F +M
Sbjct: 115 RSIPSPDVVSWTSLISGLAKSGFEAQALHHFINM 148
>emb|CAN73311.1| hypothetical protein VITISV_018159 [Vitis vinifera]
Length = 725
Score = 81.6 bits (200), Expect = 1e-13
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVHG-LQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T L S LH +H L++HAR +KSG +S +F+QN+L+ Y + + VF
Sbjct: 9 NHFTFTHALIASSSLHALHKTLEIHARAIKSGHYSDIFIQNTLLHSYVVENNXVFAKSVF 68
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
IS PDVVSWTS +S L++ G D +A+ F SMDV
Sbjct: 69 KSISSPDVVSWTSIISGLSKCGFDEEAIGEFLSMDV 104
>gb|ESW20704.1| hypothetical protein PHAVU_005G008100g [Phaseolus vulgaris]
Length = 521
Score = 77.4 bits (189), Expect = 2e-12
Identities = 40/95 (42%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHP-VHGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T+ L+ CS H L++HARLL SG + +F+QNSL+ Y + D+ S +F
Sbjct: 55 NHYTFTYALKACSSHHTRSKALEIHARLLLSGHYVDIFIQNSLLHCYLAHNDVVSATNLF 114
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMD 287
I P VVSWTS +S LA++G + AL F M+
Sbjct: 115 RSIPSPGVVSWTSLISGLAKSGFEAQALHHFSKMN 149
>ref|XP_006420997.1| hypothetical protein CICLE_v10004743mg [Citrus clementina]
gi|557522870|gb|ESR34237.1| hypothetical protein
CICLE_v10004743mg [Citrus clementina]
Length = 517
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
+H T+T L+ CS H GL++HA ++K G +F+QNSL+ FY + DI S ++F
Sbjct: 65 NHYTFTQALKACSLAHAHQKGLEIHAHVIKYGHLHDIFIQNSLLHFYVTVKDIFSAHQIF 124
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSMDV 290
+ PDVV+WT+ +S L++ G +A+ F +DV
Sbjct: 125 NSVVFPDVVTWTTIISGLSKCGFHKEAIDMFCGIDV 160
>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
Length = 563
Score = 74.7 bits (182), Expect = 1e-11
Identities = 38/94 (40%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = +3
Query: 15 TYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVFAGI 191
T F+L+ CS + + G Q+HA++L+SGF S ++Q+SL++FYS +I R+VF I
Sbjct: 94 TMAFVLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEI 153
Query: 192 SCPDVVSWTSFVSALARAGRDVDALVAFRSMDVL 293
+ ++V W++ VS AR G +AL+ FR M V+
Sbjct: 154 TERNLVCWSAMVSGYARLGMINEALIMFREMQVV 187
>ref|XP_002322762.2| hypothetical protein POPTR_0016s06560g [Populus trichocarpa]
gi|550320988|gb|EEF04523.2| hypothetical protein
POPTR_0016s06560g [Populus trichocarpa]
Length = 543
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
D+ TY FL++ C+ + G+Q H ++++ GF S +++QNSL++ YS+ DI S VF
Sbjct: 38 DNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVF 97
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSM 284
ISC DVVSWTS V+ ++G A F M
Sbjct: 98 RRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKM 131
>tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +3
Query: 27 LLRLCSFLHPV-HGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVFAGISCPD 203
+L CS L + HG Q+H +LKSGF S +F Q L+ Y+ ++ RR+F GI+CPD
Sbjct: 163 VLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPD 222
Query: 204 VVSWTSFVSALARAGRDVDALVAFRSMD 287
+ WTS ++ R GR AL F M+
Sbjct: 223 TICWTSMIAGYHRVGRYQQALALFSRME 250
>ref|XP_002336601.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Frame = +3
Query: 6 DHRTYTFLLRLCSFLHPVH-GLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVF 182
D+ TY FL++ C+ + G+Q H ++++ GF S +++QNSL++ YS+ DI S VF
Sbjct: 112 DNLTYPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVF 171
Query: 183 AGISCPDVVSWTSFVSALARAGRDVDALVAFRSM 284
ISC DVVSWTS V+ ++G A F M
Sbjct: 172 RRISCLDVVSWTSMVAGYIKSGDVTSARKLFDKM 205
>ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza
sativa Japonica Group] gi|38345689|emb|CAD41109.2|
OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa
Japonica Group] gi|215768472|dbj|BAH00701.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein
OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +3
Query: 60 HGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVFAGISCPDVVSWTSFVSALA 239
+G Q+H ++KSGF S +F + +L+ Y+ D+P+ RRVF GI+CPD + W+S ++
Sbjct: 176 YGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYH 235
Query: 240 RAGRDVDALVAFRSMD 287
R G +AL F MD
Sbjct: 236 RVGCYQEALALFSRMD 251
>gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +3
Query: 60 HGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVFAGISCPDVVSWTSFVSALA 239
+G Q+H ++KSGF S +F + +L+ Y+ D+P+ RRVF GI+CPD + W+S ++
Sbjct: 186 YGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYH 245
Query: 240 RAGRDVDALVAFRSMD 287
R G +AL F MD
Sbjct: 246 RVGCYQEALALFSRMD 261
>emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/76 (40%), Positives = 48/76 (63%)
Frame = +3
Query: 60 HGLQLHARLLKSGFHSHLFLQNSLISFYSSAADIPSTRRVFAGISCPDVVSWTSFVSALA 239
+G Q+H ++KSGF S +F + +L+ Y+ D+P+ RRVF GI+CPD + W+S ++
Sbjct: 176 YGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYH 235
Query: 240 RAGRDVDALVAFRSMD 287
R G +AL F MD
Sbjct: 236 RVGCYQEALALFSRMD 251